RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 DDTP30046 118 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 XKP51811 444 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 FPGSQ05932 587 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 ZP4Q12836 540 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 UTF1Q5T230 341 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 LCLAT1Q6UWP7 414 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 CREB3L2Q70SY1 520 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 TMEM126BQ8IUX1 230 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 KLHDC8AQ8IYD2 350 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 RDH10Q8IZV5 341 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 COPS7AQ9UBW8 275 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 ICAM5Q9UMF0 924 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 LHX6Q9UPM6 363 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 HSPE1-MOB4S4R3N1 261 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 PLXNA1Q9UIW2 1896 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 TRBV11-1A0A0K0K1C0 115 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 I3L521 148 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 I6L893 689 aaPredicted RBP9.62□□□□□ -0.87
SYNE2-206ENST00000441438 M0R036 132 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 BHLHE40O14503 412 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 CDIPTO14735 213 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 AIREO43918 545 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 ANXA7P20073 488 aaKnown RBP9.62□□□□□ -0.87
SYNE2-206ENST00000441438 HOXD9P28356 352 aaPredicted RBP9.62□□□□□ -0.87
SYNE2-206ENST00000441438 MARCKSL1P49006 195 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 C6orf226Q5I0X4 101 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 OTUD1Q5VV17 481 aaPredicted RBP9.62□□□□□ -0.87
SYNE2-206ENST00000441438 WDR25Q64LD2 544 aaPredicted RBP9.62□□□□□ -0.87
SYNE2-206ENST00000441438 FAM45BPQ6NSW5 357 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 KYAT3Q6YP21 454 aaKnown RBP9.62□□□□□ -0.87
SYNE2-206ENST00000441438 RBM44Q6ZP01 1051 aaKnown RBP9.62□□□□□ -0.87
SYNE2-206ENST00000441438 SATL1Q86VE3 508 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 SLC22A16Q86VW1 577 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 OR9Q1Q8NGQ5 310 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 SH3RF2Q8TEC5 729 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 PABPC5Q96DU9 382 aaKnown RBP9.62□□□□□ -0.87
SYNE2-206ENST00000441438 KLHDC7BQ96G42 594 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 ARV1Q9H2C2 271 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 HMG20AQ9NP66 347 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 C20orf141Q9NUB4 165 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 EBF1Q9UH73 591 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 CCL15-CCL14A0A0B4J2E2 113 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 TRDCB7Z8K6 153 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 SIGLEC5O15389 551 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 CA4P22748 312 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 HLCSP50747 726 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 UCP3P55916 312 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 MAXP61244 160 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 ARHGEF7Q14155 803 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 GK3PQ14409 553 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 PRPSAP1Q14558 356 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 CCL15Q16663 113 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 FGD3Q5JSP0 725 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 ZSCAN4Q8NAM6 433 aaPredicted RBP9.62□□□□□ -0.87
SYNE2-206ENST00000441438 MRAPQ8TCY5 172 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 RHBDD1Q8TEB9 315 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 CRYGNQ8WXF5 182 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 SHARPINQ9H0F6 387 aa9.62□□□□□ -0.87
SYNE2-206ENST00000441438 UBE2TQ9NPD8 197 aaPredicted RBP9.62□□□□□ -0.87
SYNE2-206ENST00000441438 GAR1Q9NY12 217 aaKnown RBP9.62□□□□□ -0.87
SYNE2-206ENST00000441438 LCTP09848 1927 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 CPED1A4D0V7 1026 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 RNASEH1O60930 286 aaKnown RBP9.61□□□□□ -0.87
SYNE2-206ENST00000441438 ETHE1O95571 254 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 PAX1P15863 534 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 ITGA3P26006 1051 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 GDNFP39905 211 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 SLC10A7Q0GE19 358 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 TPBGQ13641 420 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 SIRPB2Q5JXA9 342 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 RBM48Q5RL73 367 aaKnown RBP9.61□□□□□ -0.87
SYNE2-206ENST00000441438 FAM220AQ7Z4H9 259 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 PTOV1Q86YD1 416 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 CTAGE3PQ8IX95 158 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 TFAP2BQ92481 460 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 TM9SF4Q92544 642 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 WDR34Q96EX3 536 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 SFRP2Q96HF1 295 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 NARS2Q96I59 477 aaKnown RBP9.61□□□□□ -0.87
SYNE2-206ENST00000441438 ACCSQ96QU6 501 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 AGPAT1Q99943 283 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 ZFP64Q9NPA5 681 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 TSTD3H0UI37 97 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 SLC28A1O00337 649 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 SLC16A4O15374 487 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 TYROBPO43914 113 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 SUPT7LO94864 414 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 C9P02748 559 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 CHRNB2P17787 502 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 CXCR1P25024 350 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 ARL4DP49703 201 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 CRHR2Q13324 411 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 DCAF12L2Q5VW00 463 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 DNM1P34Q6PK57 102 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 OR6V1Q8N148 313 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 EIF4E3Q8N5X7 224 aaKnown RBP9.61□□□□□ -0.87
SYNE2-206ENST00000441438 PTGR2Q8N8N7 351 aaPredicted RBP9.61□□□□□ -0.87
SYNE2-206ENST00000441438 ALOXE3Q9BYJ1 711 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 Q9N2K0 584 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 SLC22A11Q9NSA0 550 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms