RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 TIMD4Q96H15 378 aa3.14□□□□□ -1.91
PFDN4-202ENST00000441080 FCRL1Q96LA6 429 aa3.14□□□□□ -1.91
PFDN4-202ENST00000441080 RBM14Q96PK6 669 aaKnown RBP3.14□□□□□ -1.91
PFDN4-202ENST00000441080 RNF167Q9H6Y7 350 aa3.14□□□□□ -1.91
PFDN4-202ENST00000441080 PNPLA6Q8IY17 1366 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 C15orf38-AP3S2A0A0A6YYH1 394 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 RAMP3O60896 148 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 MTX2O75431 263 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 ZNF853P0CG23 659 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 DBTP11182 482 aaKnown RBP3.13□□□□□ -1.91
PFDN4-202ENST00000441080 IL12AP29459 219 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 CCR1P32246 355 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 DDOSTP39656 456 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 CRYBB1P53674 252 aaPredicted RBP3.13□□□□□ -1.91
PFDN4-202ENST00000441080 PDK3Q15120 406 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 DUSP7Q16829 419 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 GPR157Q5UAW9 335 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 CTRB2Q6GPI1 263 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 ZSCAN25Q6NSZ9 544 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 ZNF620Q6ZNG0 422 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 PAQR7Q86WK9 346 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 TMEM61Q8N0U2 210 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 IPMKQ8NFU5 416 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 OR52H1Q8NGJ2 320 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 SRSF12Q8WXF0 261 aaKnown RBP3.13□□□□□ -1.91
PFDN4-202ENST00000441080 FAM104AQ969W3 186 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 CXorf40BQ96DE9 158 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 TRIM44Q96DX7 344 aaPredicted RBP3.13□□□□□ -1.91
PFDN4-202ENST00000441080 COQ2Q96H96 371 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 ITCHQ96J02 903 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 RPRD1AQ96P16 312 aaPredicted RBP3.13□□□□□ -1.91
PFDN4-202ENST00000441080 SLC38A2Q96QD8 506 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 YY1AP1Q9H869 796 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 SIAEQ9HAT2 523 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 EML4Q9HC35 981 aaKnown RBP3.13□□□□□ -1.91
PFDN4-202ENST00000441080 QPCTLQ9NXS2 382 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 KCNIP1Q9NZI2 227 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 BFARQ9NZS9 450 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 WSB1Q9Y6I7 421 aa3.13□□□□□ -1.91
PFDN4-202ENST00000441080 TRAV26-1A0A087WT03 109 aa3.12□□□□□ -1.91
PFDN4-202ENST00000441080 A0A0G2JLM5 398 aa3.12□□□□□ -1.91
PFDN4-202ENST00000441080 NKX2-6A6NCS4 301 aa3.12□□□□□ -1.91
PFDN4-202ENST00000441080 RBMY1BA6NDE4 496 aaKnown RBP3.12□□□□□ -1.91
PFDN4-202ENST00000441080 RBMY1EA6NEQ0 496 aaKnown RBP3.12□□□□□ -1.91
PFDN4-202ENST00000441080 SNNO75324 88 aaPredicted RBP3.12□□□□□ -1.91
PFDN4-202ENST00000441080 RBMY1DP0C7P1 496 aaKnown RBP3.12□□□□□ -1.91
PFDN4-202ENST00000441080 RBMY1A1P0DJD3 496 aaKnown RBP3.12□□□□□ -1.91
PFDN4-202ENST00000441080 ABOP16442 354 aa3.12□□□□□ -1.91
PFDN4-202ENST00000441080 CRISP2P16562 243 aa3.12□□□□□ -1.91
PFDN4-202ENST00000441080 CMA1P23946 247 aa3.12□□□□□ -1.91
PFDN4-202ENST00000441080 GSSP48637 474 aa3.12□□□□□ -1.91
PFDN4-202ENST00000441080 PLD1Q13393 1074 aa3.12□□□□□ -1.91
PFDN4-202ENST00000441080 KLHL38Q2WGJ6 581 aa3.12□□□□□ -1.91
PFDN4-202ENST00000441080 PDZK1Q5T2W1 519 aa3.12□□□□□ -1.91
PFDN4-202ENST00000441080 ACOT4Q8N9L9 421 aa3.12□□□□□ -1.91
PFDN4-202ENST00000441080 MDS2Q8NDY4 140 aa3.12□□□□□ -1.91
PFDN4-202ENST00000441080 OR51G1Q8NGK1 321 aa3.12□□□□□ -1.91
PFDN4-202ENST00000441080 OR52M1Q8NGK5 317 aa3.12□□□□□ -1.91
PFDN4-202ENST00000441080 TM4SF19Q96DZ7 209 aa3.12□□□□□ -1.91
PFDN4-202ENST00000441080 NPAS2Q99743 824 aa3.12□□□□□ -1.91
PFDN4-202ENST00000441080 CAPS2Q9BXY5 557 aa3.12□□□□□ -1.91
PFDN4-202ENST00000441080 PARD6BQ9BYG5 372 aa3.12□□□□□ -1.91
PFDN4-202ENST00000441080 MYOZ2Q9NPC6 264 aa3.12□□□□□ -1.91
PFDN4-202ENST00000441080 POLE4Q9NR33 117 aa3.12□□□□□ -1.91
PFDN4-202ENST00000441080 CCL28Q9NRJ3 127 aa3.12□□□□□ -1.91
PFDN4-202ENST00000441080 CDH9Q9ULB4 789 aa3.12□□□□□ -1.91
PFDN4-202ENST00000441080 TP53TG5Q9Y2B4 290 aa3.12□□□□□ -1.91
PFDN4-202ENST00000441080 SLC25A15Q9Y619 301 aa3.12□□□□□ -1.91
PFDN4-202ENST00000441080 PTCH1Q13635 1447 aa3.11□□□□□ -1.91
PFDN4-202ENST00000441080 CDC42BPBQ9Y5S2 1711 aa3.11□□□□□ -1.91
PFDN4-202ENST00000441080 A0A0G2JN53 185 aa3.11□□□□□ -1.91
PFDN4-202ENST00000441080 PCCAP05165 728 aaPredicted RBP3.11□□□□□ -1.91
PFDN4-202ENST00000441080 GLRA2P23416 452 aa3.11□□□□□ -1.91
PFDN4-202ENST00000441080 PRPHP41219 470 aa3.11□□□□□ -1.91
PFDN4-202ENST00000441080 CCT3P49368 545 aaKnown RBP3.11□□□□□ -1.91
PFDN4-202ENST00000441080 LHX2P50458 406 aa3.11□□□□□ -1.91
PFDN4-202ENST00000441080 DUSP3P51452 185 aaPredicted RBP3.11□□□□□ -1.91
PFDN4-202ENST00000441080 EIF4EBP2Q13542 120 aaPredicted RBP3.11□□□□□ -1.91
PFDN4-202ENST00000441080 GPNMBQ14956 572 aa3.11□□□□□ -1.91
PFDN4-202ENST00000441080 CYTH1Q15438 398 aa3.11□□□□□ -1.91
PFDN4-202ENST00000441080 PMF1Q6P1K2 205 aa3.11□□□□□ -1.91
PFDN4-202ENST00000441080 ZNF546Q86UE3 836 aa3.11□□□□□ -1.91
PFDN4-202ENST00000441080 OR6X1Q8NH79 312 aa3.11□□□□□ -1.91
PFDN4-202ENST00000441080 FAM210BQ96KR6 192 aa3.11□□□□□ -1.91
PFDN4-202ENST00000441080 OXGR1Q96P68 337 aa3.11□□□□□ -1.91
PFDN4-202ENST00000441080 COPS8Q99627 209 aa3.11□□□□□ -1.91
PFDN4-202ENST00000441080 TMEM246Q9BRR3 403 aa3.11□□□□□ -1.91
PFDN4-202ENST00000441080 TMEM43Q9BTV4 400 aa3.11□□□□□ -1.91
PFDN4-202ENST00000441080 GORASP2Q9H8Y8 452 aa3.11□□□□□ -1.91
PFDN4-202ENST00000441080 IL26Q9NPH9 171 aa3.11□□□□□ -1.91
PFDN4-202ENST00000441080 ZNF223Q9UK11 482 aaPredicted RBP3.11□□□□□ -1.91
PFDN4-202ENST00000441080 KLK12Q9UKR0 248 aa3.11□□□□□ -1.91
PFDN4-202ENST00000441080 IGLV3-16A0A075B6K0 115 aa3.1□□□□□ -1.91
PFDN4-202ENST00000441080 GPR89AB7ZAQ6 455 aa3.1□□□□□ -1.91
PFDN4-202ENST00000441080 ZNF208O43345 1280 aa3.1□□□□□ -1.91
PFDN4-202ENST00000441080 SPAG6O75602 509 aa3.1□□□□□ -1.91
PFDN4-202ENST00000441080 IGKV3-11P04433 115 aa3.1□□□□□ -1.91
PFDN4-202ENST00000441080 GPR89BP0CG08 455 aa3.1□□□□□ -1.91
PFDN4-202ENST00000441080 NCK1P16333 377 aa3.1□□□□□ -1.91
PFDN4-202ENST00000441080 ZNF32P17041 273 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms