RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 SLC19A3Q9BZV2 496 aa13.18□□□□□ -0.3
TNFRSF1A-204ENST00000440083 BAIAP2Q9UQB8 552 aa13.18□□□□□ -0.3
TNFRSF1A-204ENST00000440083 KLF13Q9Y2Y9 288 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF1A-204ENST00000440083 CHCHD2Q9Y6H1 151 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF1A-204ENST00000440083 UBR5O95071 2799 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 A0A087WUJ7 227 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 M0R3G1 203 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 CDK2AP1O14519 115 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 SURF4O15260 269 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 CH25HO95992 272 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 DBTP11182 482 aaKnown RBP13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 GP1BBP13224 206 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 SLC6A6P31641 620 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 TMBIM6P55061 237 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 GP2P55259 537 aaKnown RBP13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 FOXK1P85037 733 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 ZNF117Q03924 483 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 CBFBQ13951 182 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 INAQ16352 499 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 SYT14P1Q58G82 188 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 SLC25A30Q5SVS4 291 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 UBE2UQ5VVX9 321 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 APOOLQ6UXV4 268 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 ZNF367Q7RTV3 350 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 OAFQ86UD1 273 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 MARCH3Q86UD3 253 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 ALDH16A1Q8IZ83 802 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 OR2M7Q8NG81 312 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 PAQR8Q8TEZ7 354 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 RAB2BQ8WUD1 216 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 HGDQ93099 445 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 RFKQ969G6 155 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 C12orf43Q96C57 262 aaKnown RBP13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 SGCZQ96LD1 299 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 ZNF582Q96NG8 517 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 SIGLEC11Q96RL6 698 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 IFT27Q9BW83 186 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 NDEL1Q9GZM8 345 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 C12orf10Q9HB07 376 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 PROK2Q9HC23 129 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 MEPEQ9NQ76 525 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 SACM1LQ9NTJ5 587 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 ICAM5Q9UMF0 924 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 PCDHGB6Q9Y5F9 930 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 HRH3Q9Y5N1 445 aa13.17□□□□□ -0.3
TNFRSF1A-204ENST00000440083 FAM166BA8MTA8 275 aa13.16□□□□□ -0.3
TNFRSF1A-204ENST00000440083 PRODHO43272 600 aa13.16□□□□□ -0.3
TNFRSF1A-204ENST00000440083 OR7A10O76100 309 aa13.16□□□□□ -0.3
TNFRSF1A-204ENST00000440083 P04436 131 aa13.16□□□□□ -0.3
TNFRSF1A-204ENST00000440083 NAGAP17050 411 aa13.16□□□□□ -0.3
TNFRSF1A-204ENST00000440083 FUT1P19526 365 aa13.16□□□□□ -0.3
TNFRSF1A-204ENST00000440083 UQCRFS1P47985 274 aa13.16□□□□□ -0.3
TNFRSF1A-204ENST00000440083 SLC9A3P48764 834 aa13.16□□□□□ -0.3
TNFRSF1A-204ENST00000440083 KLHL22Q53GT1 634 aa13.16□□□□□ -0.3
TNFRSF1A-204ENST00000440083 SYT6Q5T7P8 510 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF1A-204ENST00000440083 SLC22A10Q63ZE4 541 aa13.16□□□□□ -0.3
TNFRSF1A-204ENST00000440083 ZNF324BQ6AW86 544 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF1A-204ENST00000440083 CBLN3Q6UW01 205 aa13.16□□□□□ -0.3
TNFRSF1A-204ENST00000440083 LINC00114Q6XXX2 140 aa13.16□□□□□ -0.3
TNFRSF1A-204ENST00000440083 ATG4DQ86TL0 474 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF1A-204ENST00000440083 C10orf53Q8N6V4 93 aa13.16□□□□□ -0.3
TNFRSF1A-204ENST00000440083 OR5W2Q8NH69 310 aa13.16□□□□□ -0.3
TNFRSF1A-204ENST00000440083 B4GALNT2Q8NHY0 566 aa13.16□□□□□ -0.3
TNFRSF1A-204ENST00000440083 TMEM80Q96HE8 168 aa13.16□□□□□ -0.3
TNFRSF1A-204ENST00000440083 TMEM43Q9BTV4 400 aa13.16□□□□□ -0.3
TNFRSF1A-204ENST00000440083 UBQLN3Q9H347 655 aa13.16□□□□□ -0.3
TNFRSF1A-204ENST00000440083 HHATLQ9HCP6 504 aa13.16□□□□□ -0.3
TNFRSF1A-204ENST00000440083 H2AFY2Q9P0M6 372 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF1A-204ENST00000440083 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.16□□□□□ -0.3
TNFRSF1A-204ENST00000440083 TRAV27A0A087WT01 109 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 LRRC3CA6NJW4 275 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 RIIAD1A6NNX1 92 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 C17orf51A8MQB3 221 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 KDM4EB2RXH2 506 aaPredicted RBP13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 ZNHIT1O43257 154 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 GMFGO60234 142 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 FADS1O60427 444 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 CDC40O60508 579 aaKnown RBP eCLIP13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 RAB36O95755 333 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 LCKP06239 509 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 ADORA3P0DMS8 318 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 CNR1P21554 472 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 PAX7P23759 505 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 C21orf33P30042 268 aaPredicted RBP13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 SLC1A3P43003 542 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 SLC15A1P46059 708 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 P2RX1P51575 399 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 CDH11P55287 796 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 MRPL49Q13405 166 aaKnown RBP13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 ARHGAP11AQ6P4F7 1023 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 NUP54Q7Z3B4 507 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 GID4Q8IVV7 300 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 SIAH3Q8IW03 269 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 DND1Q8IYX4 353 aaKnown RBP13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 ANKK1Q8NFD2 765 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 OR51A7Q8NH64 312 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 OTULINQ96BN8 352 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 FUNDC2Q9BWH2 189 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 CDCA4Q9BXL8 241 aa13.15□□□□□ -0.3
TNFRSF1A-204ENST00000440083 FN3KQ9H479 309 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms