RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 OOSP2Q86WS3 158 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 OR52I2Q8NH67 350 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 MOGAT1Q96PD6 335 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 DPCDQ9BVM2 203 aaPredicted RBP12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 LIN7BQ9HAP6 207 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 NRIP3Q9NQ35 241 aa12.4□□□□□ -0.42
HERPUD1-204ENST00000439977 SEC16AO15027 2179 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 C7orf66A4D0T2 115 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 DCTN6O00399 190 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 ZNF593O00488 134 aaPredicted RBP12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 OIP5O43482 229 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 SERPINA3P01011 423 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 CD53P19397 219 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 DIO1P49895 249 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 ZNF81P51508 661 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 POU4F2Q12837 409 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 KCNAB1Q14722 419 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 HYAL4Q2M3T9 481 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 CDONQ4KMG0 1287 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 ELMOD2Q8IZ81 293 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 LSMEM1Q8N8F7 131 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 SPATA2Q9UM82 520 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 BAIAP2Q9UQB8 552 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 KLHDC2Q9Y2U9 406 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 HEATR5AQ86XA9 2040 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 TRAV1-2A0A0B4J238 106 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 GPR171O14626 319 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 VEGFCP49767 419 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 ACTA2P62736 377 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 ACTG2P63267 376 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 HYAL1Q12794 435 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 ARMC6Q6NXE6 501 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 RPL22L1Q6P5R6 122 aaKnown RBP12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 MCATQ8IVS2 390 aaKnown RBP12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 BCORP1Q8N888 145 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 OR14A16Q8NHC5 309 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 RGP1Q92546 391 aaPredicted RBP12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 ELF4Q99607 663 aaPredicted RBP12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 NKX2-4Q9H2Z4 354 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 Q9N2J8 555 aa12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 EIF3KQ9UBQ5 218 aaKnown RBP12.39□□□□□ -0.43
HERPUD1-204ENST00000439977 TP53BP1Q12888 1972 aaPredicted RBP12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 RAD1O60671 282 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 TNFP01375 233 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 TMIGD3P0DMS9 266 aaPredicted RBP12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 CTSEP14091 401 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 AKT2P31751 481 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 SELENOPP49908 381 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 MAZP56270 477 aaKnown RBP12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 POU4F3Q15319 338 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 CD226Q15762 336 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 RFPL4BQ6ZWI9 263 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 DEFB119Q8N690 84 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 ZNF321PQ8N8H1 164 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 SLC2A12Q8TD20 617 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 HAVCR2Q8TDQ0 301 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 ALG12Q9BV10 488 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 SEMA4CQ9C0C4 833 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 ABRACLQ9P1F3 81 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 FBXL21Q9UKT6 434 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 PIAS3Q9Y6X2 628 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 FANCMQ8IYD8 2048 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 A0A087WUJ7 227 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 ENPP1P22413 925 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 PITPNAQ00169 270 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 PLA2G7Q13093 441 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 KLF9Q13886 244 aaPredicted RBP12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 FAM209AQ5JX71 171 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 ZBTB37Q5TC79 503 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 FAM199XQ6PEV8 388 aaPredicted RBP12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 LINC00114Q6XXX2 140 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 Q6ZTK2 550 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 LUZP2Q86TE4 346 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 PRR22Q8IZ63 422 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 CEP76Q8TAP6 659 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 MMABQ96EY8 250 aaPredicted RBP12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 DGAT2Q96PD7 388 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 ULBP3Q9BZM4 244 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 C20orf85Q9H1P6 137 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 METTL17Q9H7H0 456 aaPredicted RBP12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 ICAM5Q9UMF0 924 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 CAMK2AQ9UQM7 478 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 TMEM184BQ9Y519 407 aaPredicted RBP12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 PCDHGA9Q9Y5G4 932 aaKnown RBP12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 OR5K3A6NET4 321 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 SERINC4A6NH21 518 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 IFITM5A6NNB3 132 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 MAS1P04201 325 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 RBM34P42696 430 aaKnown RBP12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 PER3P56645 1201 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 ZNF767PQ75MW2 155 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 ZNF550Q7Z398 422 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 ZNF680Q8NEM1 530 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 OR2T35Q8NGX2 323 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 OR2T4Q8NH00 348 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 PHOSPHO1Q8TCT1 267 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 ADAMTS14Q8WXS8 1223 aa12.38□□□□□ -0.43
HERPUD1-204ENST00000439977 C3orf49Q96BT1 292 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms