RNA–Protein interactions for RNA: ENST00000438413.5

MUC1-211, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-211ENST00000438413 CDHR4A6H8M9 788 aa16.61■□□□□ 0.25
MUC1-211ENST00000438413 A8MVM7 634 aa16.61■□□□□ 0.25
MUC1-211ENST00000438413 FRS3O43559 492 aa16.61■□□□□ 0.25
MUC1-211ENST00000438413 STAMBPO95630 424 aa16.61■□□□□ 0.25
MUC1-211ENST00000438413 PGRP06401 933 aa16.61■□□□□ 0.25
MUC1-211ENST00000438413 CALCRP30988 508 aa16.61■□□□□ 0.25
MUC1-211ENST00000438413 ACAA2P42765 397 aaKnown RBP16.61■□□□□ 0.25
MUC1-211ENST00000438413 CDKN2CP42773 168 aa16.61■□□□□ 0.25
MUC1-211ENST00000438413 NME5P56597 212 aa16.61■□□□□ 0.25
MUC1-211ENST00000438413 C3orf36Q3SXR2 165 aa16.61■□□□□ 0.25
MUC1-211ENST00000438413 COX20Q5RI15 118 aa16.61■□□□□ 0.25
MUC1-211ENST00000438413 PRAMEF8Q5VWM4 474 aa16.61■□□□□ 0.25
MUC1-211ENST00000438413 PRAMEF7Q5VXH5 474 aa16.61■□□□□ 0.25
MUC1-211ENST00000438413 WBP2NLQ6ICG8 309 aa16.61■□□□□ 0.25
MUC1-211ENST00000438413 NIPAL3Q6P499 406 aa16.61■□□□□ 0.25
MUC1-211ENST00000438413 ZNF836Q6ZNA1 936 aa16.61■□□□□ 0.25
MUC1-211ENST00000438413 ZNF621Q6ZSS3 439 aa16.61■□□□□ 0.25
MUC1-211ENST00000438413 LRRC34Q8IZ02 419 aa16.61■□□□□ 0.25
MUC1-211ENST00000438413 OR4F15Q8NGB8 312 aa16.61■□□□□ 0.25
MUC1-211ENST00000438413 MAGEE2Q8TD90 523 aaPredicted RBP16.61■□□□□ 0.25
MUC1-211ENST00000438413 NUF2Q9BZD4 464 aa16.61■□□□□ 0.25
MUC1-211ENST00000438413 SEC61A2Q9H9S3 476 aa16.61■□□□□ 0.25
MUC1-211ENST00000438413 FBXO9Q9UK97 447 aaPredicted RBP16.61■□□□□ 0.25
MUC1-211ENST00000438413 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.61■□□□□ 0.25
MUC1-211ENST00000438413 OR6C65A6NJZ3 312 aa16.6■□□□□ 0.25
MUC1-211ENST00000438413 UPK3AO75631 287 aa16.6■□□□□ 0.25
MUC1-211ENST00000438413 IGLV1-44P01699 117 aa16.6■□□□□ 0.25
MUC1-211ENST00000438413 GSNP06396 782 aa16.6■□□□□ 0.25
MUC1-211ENST00000438413 COPZ1P61923 177 aa16.6■□□□□ 0.25
MUC1-211ENST00000438413 UFM1P61960 85 aa16.6■□□□□ 0.25
MUC1-211ENST00000438413 LIN52Q52LA3 116 aa16.6■□□□□ 0.25
MUC1-211ENST00000438413 VRK2Q86Y07 508 aa16.6■□□□□ 0.25
MUC1-211ENST00000438413 OR52P1PQ8NH57 321 aa16.6■□□□□ 0.25
MUC1-211ENST00000438413 OR52E6Q96RD3 313 aa16.6■□□□□ 0.25
MUC1-211ENST00000438413 SORT1Q99523 831 aa16.6■□□□□ 0.25
MUC1-211ENST00000438413 NELFAQ9H3P2 528 aa16.6■□□□□ 0.25
MUC1-211ENST00000438413 MOV10Q9HCE1 1003 aaKnown RBP16.6■□□□□ 0.25
MUC1-211ENST00000438413 PRDM4Q9UKN5 801 aa16.6■□□□□ 0.25
MUC1-211ENST00000438413 hCG_2039718K7EN88 272 aa16.59■□□□□ 0.25
MUC1-211ENST00000438413 BIRC5O15392 142 aa16.59■□□□□ 0.25
MUC1-211ENST00000438413 SNUPNO95149 360 aaKnown RBP16.59■□□□□ 0.25
MUC1-211ENST00000438413 IGKV3-15P01624 115 aa16.59■□□□□ 0.25
MUC1-211ENST00000438413 ERCC1P07992 297 aaPredicted RBP16.59■□□□□ 0.25
MUC1-211ENST00000438413 DAOP14920 347 aa16.59■□□□□ 0.25
MUC1-211ENST00000438413 GIFP27352 417 aa16.59■□□□□ 0.25
MUC1-211ENST00000438413 SLC1A6P48664 564 aa16.59■□□□□ 0.25
MUC1-211ENST00000438413 CHN2P52757 468 aa16.59■□□□□ 0.25
MUC1-211ENST00000438413 SH3BGRP55822 239 aaPredicted RBP16.59■□□□□ 0.25
MUC1-211ENST00000438413 MAPK11Q15759 364 aa16.59■□□□□ 0.25
MUC1-211ENST00000438413 C1orf140Q5VVS0 124 aa16.59■□□□□ 0.25
MUC1-211ENST00000438413 EPHX4Q8IUS5 362 aa16.59■□□□□ 0.25
MUC1-211ENST00000438413 RFLNBQ8N5W9 214 aa16.59■□□□□ 0.25
MUC1-211ENST00000438413 FAM169BQ8N8A8 192 aa16.59■□□□□ 0.25
MUC1-211ENST00000438413 NUP37Q8NFH4 326 aa16.59■□□□□ 0.25
MUC1-211ENST00000438413 NEU4Q8WWR8 484 aaPredicted RBP16.59■□□□□ 0.25
MUC1-211ENST00000438413 LINC00470Q9BZP3 86 aa16.59■□□□□ 0.25
MUC1-211ENST00000438413 ZNF442Q9H7R0 627 aa16.59■□□□□ 0.25
MUC1-211ENST00000438413 RASD1Q9Y272 281 aa16.59■□□□□ 0.25
MUC1-211ENST00000438413 A0A096LPI6 279 aa16.58■□□□□ 0.24
MUC1-211ENST00000438413 TCF21O43680 179 aa16.58■□□□□ 0.24
MUC1-211ENST00000438413 CELA3BP08861 270 aa16.58■□□□□ 0.24
MUC1-211ENST00000438413 TACSTD2P09758 323 aa16.58■□□□□ 0.24
MUC1-211ENST00000438413 ALDOCP09972 364 aaKnown RBP16.58■□□□□ 0.24
MUC1-211ENST00000438413 TFPTP0C1Z6 253 aa16.58■□□□□ 0.24
MUC1-211ENST00000438413 HOXB1P14653 301 aaPredicted RBP16.58■□□□□ 0.24
MUC1-211ENST00000438413 NCF2P19878 526 aaPredicted RBP16.58■□□□□ 0.24
MUC1-211ENST00000438413 NPR2P20594 1047 aa16.58■□□□□ 0.24
MUC1-211ENST00000438413 IL2RGP31785 369 aa16.58■□□□□ 0.24
MUC1-211ENST00000438413 THBS4P35443 961 aa16.58■□□□□ 0.24
MUC1-211ENST00000438413 ROR2Q01974 943 aaKnown RBP16.58■□□□□ 0.24
MUC1-211ENST00000438413 HGFACQ04756 655 aa16.58■□□□□ 0.24
MUC1-211ENST00000438413 LRRC74AQ0VAA2 488 aa16.58■□□□□ 0.24
MUC1-211ENST00000438413 ZSWIM7Q19AV6 140 aa16.58■□□□□ 0.24
MUC1-211ENST00000438413 OGFOD2Q6N063 350 aa16.58■□□□□ 0.24
MUC1-211ENST00000438413 MYPOPQ86VE0 399 aaPredicted RBP16.58■□□□□ 0.24
MUC1-211ENST00000438413 KIRREL3Q8IZU9 778 aa16.58■□□□□ 0.24
MUC1-211ENST00000438413 MEAF6Q9HAF1 191 aa16.58■□□□□ 0.24
MUC1-211ENST00000438413 AIG1Q9NVV5 245 aa16.58■□□□□ 0.24
MUC1-211ENST00000438413 P2RX2Q9UBL9 471 aa16.58■□□□□ 0.24
MUC1-211ENST00000438413 TMEFF2Q9UIK5 374 aaPredicted RBP16.58■□□□□ 0.24
MUC1-211ENST00000438413 HAO1Q9UJM8 370 aa16.58■□□□□ 0.24
MUC1-211ENST00000438413 DSPPQ9NZW4 1301 aa16.58■□□□□ 0.24
MUC1-211ENST00000438413 VSTM5A8MXK1 200 aa16.57■□□□□ 0.24
MUC1-211ENST00000438413 LILRA1O75019 489 aa16.57■□□□□ 0.24
MUC1-211ENST00000438413 NPIPB7O75200 414 aa16.57■□□□□ 0.24
MUC1-211ENST00000438413 AHSA1O95433 338 aa16.57■□□□□ 0.24
MUC1-211ENST00000438413 KRT75O95678 551 aa16.57■□□□□ 0.24
MUC1-211ENST00000438413 PRG2P13727 222 aa16.57■□□□□ 0.24
MUC1-211ENST00000438413 APEX1P27695 318 aaKnown RBP16.57■□□□□ 0.24
MUC1-211ENST00000438413 IL12AP29459 219 aa16.57■□□□□ 0.24
MUC1-211ENST00000438413 SRP14P37108 136 aaKnown RBP16.57■□□□□ 0.24
MUC1-211ENST00000438413 CLDN17P56750 224 aa16.57■□□□□ 0.24
MUC1-211ENST00000438413 RNF220Q5VTB9 566 aa16.57■□□□□ 0.24
MUC1-211ENST00000438413 SPATA21Q7Z572 469 aa16.57■□□□□ 0.24
MUC1-211ENST00000438413 ZCCHC24Q8N2G6 241 aaKnown RBP16.57■□□□□ 0.24
MUC1-211ENST00000438413 KDM8Q8N371 416 aa16.57■□□□□ 0.24
MUC1-211ENST00000438413 SVOPLQ8N434 492 aa16.57■□□□□ 0.24
MUC1-211ENST00000438413 LINC01356Q8N9X3 169 aa16.57■□□□□ 0.24
MUC1-211ENST00000438413 HPS1Q92902 700 aa16.57■□□□□ 0.24
MUC1-211ENST00000438413 C1orf159Q96HA4 380 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms