RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 CA3P07451 260 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 CD14P08571 375 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 SLC35E2P0CK97 266 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 PET100P0DJ07 73 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 RBMXP38159 391 aaKnown RBP6.17□□□□□ -1.42
CSDE1-205ENST00000438362 SOX9P48436 509 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 TAS2R19P59542 299 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 CHAF1BQ13112 559 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 BTN1A1Q13410 526 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF628Q5EBL2 1059 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF793Q6ZN11 406 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 ESPNLQ6ZVH7 1005 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 FBXL6Q8N531 539 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 SIRT6Q8N6T7 355 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 DNAAF1Q8NEP3 725 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 OR6N1Q8NGY5 312 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 DUSP19Q8WTR2 217 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 DIO2Q92813 273 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 MRGPRX3Q96LB0 322 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 ARHGDIGQ99819 225 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 URM1Q9BTM9 101 aaKnown RBP6.17□□□□□ -1.42
CSDE1-205ENST00000438362 ELOVL3Q9HB03 270 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 GPN3Q9UHW5 284 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-205ENST00000438362 COPS3Q9UNS2 423 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 RGPD3A6NKT7 1758 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-205ENST00000438362 RGPD4Q7Z3J3 1758 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 ANK1P16157 1881 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 TRIM64BA6NI03 449 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 TMEM212A6NML5 194 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 EFCAB7A8K855 629 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 SLC16A7O60669 478 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 CSTBP04080 98 aaKnown RBP6.17□□□□□ -1.42
CSDE1-205ENST00000438362 HRGP04196 525 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 SEMG1P04279 462 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 PPP3CBP16298 524 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 CRABP1P29762 137 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF41P51814 821 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-205ENST00000438362 NR0B1P51843 470 aaKnown RBP6.17□□□□□ -1.42
CSDE1-205ENST00000438362 RAB2AP61019 212 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 GLO1Q04760 184 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 DYRK1AQ13627 763 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 EIF2B1Q14232 305 aaKnown RBP6.17□□□□□ -1.42
CSDE1-205ENST00000438362 NSDHLQ15738 373 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 MPEG1Q2M385 716 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 SLC35D3Q5M8T2 416 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 RNLSQ5VYX0 342 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 LILRA6Q6PI73 481 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 TSSK4Q6SA08 328 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 GSG1LQ6UXU4 331 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 TMEM184AQ6ZMB5 413 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF704Q6ZNC4 412 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-205ENST00000438362 DPY19L4Q7Z388 723 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF546Q86UE3 836 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF547Q8IVP9 402 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 PRR22Q8IZ63 422 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 SYS1Q8N2H4 156 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 GTPBP8Q8N3Z3 284 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-205ENST00000438362 ARL14Q8N4G2 192 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF283Q8N7M2 679 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 OR4K17Q8NGC6 315 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 OR13C5Q8NGS8 318 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 OR52I2Q8NH67 350 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 UCN3Q969E3 161 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 SLC25A44Q96H78 314 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-205ENST00000438362 Q96M85 177 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 PHB2Q99623 299 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 MARVELD1Q9BSK0 173 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 GPR174Q9BXC1 333 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 LYRM4Q9HD34 91 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 QPCTLQ9NXS2 382 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 HHLA2Q9UM44 414 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 RBM7Q9Y580 266 aaKnown RBP6.17□□□□□ -1.42
CSDE1-205ENST00000438362 ETV7Q9Y603 341 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 KRBOX1C9JBD0 128 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 OR2T1O43869 369 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 SELENOFO60613 162 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 GLCEO94923 617 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 PAPLNO95428 1278 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 DCNP07585 359 aaKnown RBP6.17□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF806P0C7X5 589 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 GALP22466 123 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 LSSP48449 732 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 MVDP53602 400 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 P2RX3P56373 397 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 CXADRP78310 365 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 ALKBH1Q13686 389 aaKnown RBP6.17□□□□□ -1.42
CSDE1-205ENST00000438362 ERV3-1Q14264 604 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 AGERQ15109 404 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 PLEKHN1Q494U1 663 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-205ENST00000438362 GXYLT1Q4G148 440 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 GPAT4Q86UL3 456 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 ELP5Q8TE02 316 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 ZG16BQ96DA0 208 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 SMIM19Q96E16 107 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 SFXN2Q96NB2 322 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 MIXL1Q9H2W2 232 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 METTL7AQ9H8H3 244 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 PRDM7Q9NQW5 492 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 ACOXLQ9NUZ1 547 aa6.17□□□□□ -1.42
CSDE1-205ENST00000438362 TBC1D29Q9UFV1 150 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms