RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 USP22Q9UPT9 525 aa12.78□□□□□ -0.36
HDAC8-213ENST00000436675 LOC105371242A0A075B767 164 aa12.77□□□□□ -0.37
HDAC8-213ENST00000436675 PRAMEF27A3QJZ7 478 aa12.77□□□□□ -0.37
HDAC8-213ENST00000436675 ZNF503-AS2A6NEH8 195 aa12.77□□□□□ -0.37
HDAC8-213ENST00000436675 C1QCP02747 245 aa12.77□□□□□ -0.37
HDAC8-213ENST00000436675 HPXP02790 462 aa12.77□□□□□ -0.37
HDAC8-213ENST00000436675 MSMBP08118 114 aa12.77□□□□□ -0.37
HDAC8-213ENST00000436675 FGF4P08620 206 aa12.77□□□□□ -0.37
HDAC8-213ENST00000436675 SAGP10523 405 aaPredicted RBP12.77□□□□□ -0.37
HDAC8-213ENST00000436675 EPHA1P21709 976 aa12.77□□□□□ -0.37
HDAC8-213ENST00000436675 CXCR1P25024 350 aa12.77□□□□□ -0.37
HDAC8-213ENST00000436675 CAPZA2P47755 286 aa12.77□□□□□ -0.37
HDAC8-213ENST00000436675 HPCAP84074 193 aa12.77□□□□□ -0.37
HDAC8-213ENST00000436675 SCGB2A2Q13296 93 aa12.77□□□□□ -0.37
HDAC8-213ENST00000436675 WHAMMP3Q1A5X7 153 aa12.77□□□□□ -0.37
HDAC8-213ENST00000436675 C3orf36Q3SXR2 165 aa12.77□□□□□ -0.37
HDAC8-213ENST00000436675 AWAT1Q58HT5 328 aa12.77□□□□□ -0.37
HDAC8-213ENST00000436675 ELFN2Q5R3F8 820 aa12.77□□□□□ -0.37
HDAC8-213ENST00000436675 CREB3L2Q70SY1 520 aa12.77□□□□□ -0.37
HDAC8-213ENST00000436675 KDM8Q8N371 416 aa12.77□□□□□ -0.37
HDAC8-213ENST00000436675 TUBGCP3Q96CW5 907 aa12.77□□□□□ -0.37
HDAC8-213ENST00000436675 MECRQ9BV79 373 aa12.77□□□□□ -0.37
HDAC8-213ENST00000436675 RBM4Q9BWF3 364 aaKnown RBP12.77□□□□□ -0.37
HDAC8-213ENST00000436675 CRLF2Q9HC73 371 aa12.77□□□□□ -0.37
HDAC8-213ENST00000436675 POLE3Q9NRF9 147 aa12.77□□□□□ -0.37
HDAC8-213ENST00000436675 CMAHPQ9Y471 501 aa12.77□□□□□ -0.37
HDAC8-213ENST00000436675 PCDHGB1Q9Y5G3 927 aa12.77□□□□□ -0.37
HDAC8-213ENST00000436675 SEC14L2O76054 403 aa12.76□□□□□ -0.37
HDAC8-213ENST00000436675 AGR2O95994 175 aa12.76□□□□□ -0.37
HDAC8-213ENST00000436675 AVPP01185 164 aa12.76□□□□□ -0.37
HDAC8-213ENST00000436675 IGKV3-15P01624 115 aa12.76□□□□□ -0.37
HDAC8-213ENST00000436675 SHBGP04278 402 aa12.76□□□□□ -0.37
HDAC8-213ENST00000436675 GAAP10253 952 aa12.76□□□□□ -0.37
HDAC8-213ENST00000436675 CBR1P16152 277 aa12.76□□□□□ -0.37
HDAC8-213ENST00000436675 ALDH3A1P30838 453 aa12.76□□□□□ -0.37
HDAC8-213ENST00000436675 KHKP50053 298 aa12.76□□□□□ -0.37
HDAC8-213ENST00000436675 P2RY4P51582 365 aa12.76□□□□□ -0.37
HDAC8-213ENST00000436675 SEC24CP53992 1094 aa12.76□□□□□ -0.37
HDAC8-213ENST00000436675 DEFA6Q01524 100 aa12.76□□□□□ -0.37
HDAC8-213ENST00000436675 MSMPQ1L6U9 139 aa12.76□□□□□ -0.37
HDAC8-213ENST00000436675 PDLIM3Q53GG5 364 aaPredicted RBP12.76□□□□□ -0.37
HDAC8-213ENST00000436675 C1orf229Q6ZS94 237 aaPredicted RBP12.76□□□□□ -0.37
HDAC8-213ENST00000436675 EPHX4Q8IUS5 362 aa12.76□□□□□ -0.37
HDAC8-213ENST00000436675 ANKFN1Q8N957 763 aa12.76□□□□□ -0.37
HDAC8-213ENST00000436675 MIPOL1Q8TD10 442 aa12.76□□□□□ -0.37
HDAC8-213ENST00000436675 MAGEE2Q8TD90 523 aaPredicted RBP12.76□□□□□ -0.37
HDAC8-213ENST00000436675 TAPBPLQ9BX59 468 aa12.76□□□□□ -0.37
HDAC8-213ENST00000436675 MRPL37Q9BZE1 423 aaKnown RBP12.76□□□□□ -0.37
HDAC8-213ENST00000436675 NOX3Q9HBY0 568 aa12.76□□□□□ -0.37
HDAC8-213ENST00000436675 REV1Q9UBZ9 1251 aa12.76□□□□□ -0.37
HDAC8-213ENST00000436675 MID2Q9UJV3 735 aa12.76□□□□□ -0.37
HDAC8-213ENST00000436675 ARHGAP32A7KAX9 2087 aa12.76□□□□□ -0.37
HDAC8-213ENST00000436675 CFAP73A6NFT4 308 aa12.75□□□□□ -0.37
HDAC8-213ENST00000436675 TMEM229AB2RXF0 380 aa12.75□□□□□ -0.37
HDAC8-213ENST00000436675 TMPRSS2O15393 492 aa12.75□□□□□ -0.37
HDAC8-213ENST00000436675 PPIHO43447 177 aaKnown RBP12.75□□□□□ -0.37
HDAC8-213ENST00000436675 VWFP04275 2813 aa12.75□□□□□ -0.37
HDAC8-213ENST00000436675 CHRM4P08173 479 aa12.75□□□□□ -0.37
HDAC8-213ENST00000436675 GKN3PP0CG01 181 aa12.75□□□□□ -0.37
HDAC8-213ENST00000436675 KRT4P19013 534 aa12.75□□□□□ -0.37
HDAC8-213ENST00000436675 UQCRC2P22695 453 aa12.75□□□□□ -0.37
HDAC8-213ENST00000436675 PAX7P23759 505 aa12.75□□□□□ -0.37
HDAC8-213ENST00000436675 CHI3L1P36222 383 aaPredicted RBP12.75□□□□□ -0.37
HDAC8-213ENST00000436675 ALDH3B1P43353 468 aa12.75□□□□□ -0.37
HDAC8-213ENST00000436675 CLDN8P56748 225 aa12.75□□□□□ -0.37
HDAC8-213ENST00000436675 CLDN17P56750 224 aa12.75□□□□□ -0.37
HDAC8-213ENST00000436675 EPS8Q12929 822 aa12.75□□□□□ -0.37
HDAC8-213ENST00000436675 SYPL1Q16563 259 aa12.75□□□□□ -0.37
HDAC8-213ENST00000436675 PRAMEF8Q5VWM4 474 aa12.75□□□□□ -0.37
HDAC8-213ENST00000436675 PRAMEF7Q5VXH5 474 aa12.75□□□□□ -0.37
HDAC8-213ENST00000436675 AP1ARQ63HQ0 302 aa12.75□□□□□ -0.37
HDAC8-213ENST00000436675 MDP1Q86V88 176 aa12.75□□□□□ -0.37
HDAC8-213ENST00000436675 CADM2Q8N3J6 435 aa12.75□□□□□ -0.37
HDAC8-213ENST00000436675 OR51F2Q8NH61 342 aa12.75□□□□□ -0.37
HDAC8-213ENST00000436675 KIF18AQ8NI77 898 aa12.75□□□□□ -0.37
HDAC8-213ENST00000436675 ZNF837Q96EG3 531 aaPredicted RBP12.75□□□□□ -0.37
HDAC8-213ENST00000436675 SLC6A7Q99884 636 aa12.75□□□□□ -0.37
HDAC8-213ENST00000436675 SYT3Q9BQG1 590 aa12.75□□□□□ -0.37
HDAC8-213ENST00000436675 ZDHHC2Q9UIJ5 367 aa12.75□□□□□ -0.37
HDAC8-213ENST00000436675 FZR1Q9UM11 496 aa12.75□□□□□ -0.37
HDAC8-213ENST00000436675 RNASET2O00584 256 aaKnown RBP12.74□□□□□ -0.37
HDAC8-213ENST00000436675 SYNGR3O43761 229 aa12.74□□□□□ -0.37
HDAC8-213ENST00000436675 NPHS1O60500 1241 aa12.74□□□□□ -0.37
HDAC8-213ENST00000436675 PNPP00491 289 aa12.74□□□□□ -0.37
HDAC8-213ENST00000436675 TFP02787 698 aa12.74□□□□□ -0.37
HDAC8-213ENST00000436675 GUSBP08236 651 aa12.74□□□□□ -0.37
HDAC8-213ENST00000436675 ADRA2CP18825 462 aa12.74□□□□□ -0.37
HDAC8-213ENST00000436675 MAD2L1BPQ15013 274 aaPredicted RBP12.74□□□□□ -0.37
HDAC8-213ENST00000436675 ZNF311Q5JNZ3 666 aa12.74□□□□□ -0.37
HDAC8-213ENST00000436675 MRPL2Q5T653 305 aaKnown RBP12.74□□□□□ -0.37
HDAC8-213ENST00000436675 SAXO2Q658L1 398 aa12.74□□□□□ -0.37
HDAC8-213ENST00000436675 LRP11Q86VZ4 500 aa12.74□□□□□ -0.37
HDAC8-213ENST00000436675 GSPT2Q8IYD1 628 aaKnown RBP12.74□□□□□ -0.37
HDAC8-213ENST00000436675 FAM169BQ8N8A8 192 aa12.74□□□□□ -0.37
HDAC8-213ENST00000436675 OIT3Q8WWZ8 545 aa12.74□□□□□ -0.37
HDAC8-213ENST00000436675 RDH5Q92781 318 aa12.74□□□□□ -0.37
HDAC8-213ENST00000436675 YIPF5Q969M3 257 aa12.74□□□□□ -0.37
HDAC8-213ENST00000436675 SLC25A36Q96CQ1 311 aa12.74□□□□□ -0.37
HDAC8-213ENST00000436675 PPP1R36Q96LQ0 422 aa12.74□□□□□ -0.37
HDAC8-213ENST00000436675 ZNF317Q96PQ6 595 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms