RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 PPP2CBP62714 309 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 RPS27AP62979 156 aaKnown RBP10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 UBA52P62987 128 aaKnown RBP10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 PPP2CAP67775 309 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 PAN3Q58A45 887 aaKnown RBP10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 OLFML2AQ68BL7 652 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 SLC36A1Q7Z2H8 476 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 KRT77Q7Z794 578 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 OR14A16Q8NHC5 309 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 PAQR8Q8TEZ7 354 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 COMMD9Q9P000 198 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 IL36AQ9UHA7 158 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 FBXO4Q9UKT5 387 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 A0A0A6YYD5 115 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 ZNF705EA8MWA4 302 aaPredicted RBP10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 LATO43561 262 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 FADS1O60427 444 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 SYN1P17600 705 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 HTR2AP28223 471 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 SNRPEP62304 92 aaKnown RBP10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 MLC1Q15049 377 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 H3F3CQ6NXT2 135 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 FAM111BQ6SJ93 734 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 SLC35F2Q8IXU6 374 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 SFT2D1Q8WV19 159 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 VN1R3Q9BXE9 311 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 C2orf42Q9NWW7 574 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 SLC23A2Q9UGH3 650 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 SIGLEC7Q9Y286 467 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 PLEKHA6Q9Y2H5 1048 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 TRAV18A0A075B6X5 111 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 TMEM218A2RU14 115 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 NRG2O14511 850 aaPredicted RBP10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 OGG1O15527 345 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 EIF3GO75821 320 aaKnown RBP eCLIP10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 CD3DP04234 171 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 S100A9P06702 114 aaKnown RBP10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 GP1BAP07359 652 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 RPA2P15927 270 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 RPL4P36578 427 aaKnown RBP10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 ID2Q02363 134 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 ZNF234Q14588 700 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 AMZ1Q400G9 498 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 GXYLT1Q4G148 440 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 RPL22L1Q6P5R6 122 aaKnown RBP10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 HTR3DQ70Z44 454 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 RNF180Q86T96 592 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 DCUN1D3Q8IWE4 304 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 OR1M1Q8NGA1 313 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 HAVCR1Q96D42 359 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 TRMT2BQ96GJ1 504 aaKnown RBP10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 HSPA12BQ96MM6 686 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 CNN2Q99439 309 aaKnown RBP10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 PTDSS2Q9BVG9 487 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 ACTRT3Q9BYD9 372 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 SLITRK2Q9H156 845 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 POFUT1Q9H488 388 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 MTHFD2LQ9H903 347 aaPredicted RBP10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 ADAP2Q9NPF8 381 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 RFPL4AA6NLU0 287 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 OR2AT4A6NND4 320 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 C4orf51C9J302 202 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 RFPL4AL1F8VTS6 287 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 SULT1C2O00338 296 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 PEX12O00623 359 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 SCAMP1O15126 338 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 FARS2O95363 451 aaKnown RBP10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 FABP1P07148 127 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 ANXA2P07355 339 aaKnown RBP10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 NFYBP25208 207 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 AK4P27144 223 aaPredicted RBP10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 TCEA2Q15560 299 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 TMEM215Q68D42 235 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 FIGNL1Q6PIW4 674 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 TMCO2Q7Z6W1 182 aaPredicted RBP10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 SOCS4Q8WXH5 440 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 AICDAQ9GZX7 198 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 KCNK15Q9H427 330 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 NIT2Q9NQR4 276 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 INSL5Q9Y5Q6 135 aa10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 KIF26AQ9ULI4 1882 aaPredicted RBP10.61□□□□□ -0.71
HMGCS1-202ENST00000433297 OR5H14A6NHG9 310 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 LILRB5O75023 590 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 ADAM11O75078 769 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 ABLIM3O94929 683 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 ZFPL1O95159 310 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 IFNGP01579 166 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 HIST1H1CP16403 213 aaKnown RBP10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 HIST1H1TP22492 207 aaPredicted RBP10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 NDUFS1P28331 727 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 CTGFP29279 349 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 CSNK1G2P78368 415 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 S100A12P80511 92 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 LTBQ06643 244 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 PDZK1IP1Q13113 114 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 SNTB1Q13884 538 aaKnown RBP10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 PON3Q15166 354 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 FNDC3BQ53EP0 1204 aaKnown RBP10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 PRRT3Q5FWE3 981 aa10.6□□□□□ -0.71
HMGCS1-202ENST00000433297 MRPL2Q5T653 305 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms