RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 KCTD21Q4G0X4 260 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 ZNF766Q5HY98 468 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 RBM48Q5RL73 367 aaKnown RBP16.43■□□□□ 0.22
HMGN1-206ENST00000431390 C1QL3Q5VWW1 255 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 RAET1LQ5VY80 246 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 THSD4Q6ZMP0 1018 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 PTCHD4Q6ZW05 846 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 HIST3H2AQ7L7L0 130 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 GALNTL5Q7Z4T8 443 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 LNX2Q8N448 690 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 OR8J1Q8NGP2 316 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 MFSD8Q8NHS3 518 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 CNIH3Q8TBE1 160 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 HIST1H2ACQ93077 130 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 UBE2FQ969M7 185 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 ZNF566Q969W8 418 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 KLHL1Q9NR64 748 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 RASSF1Q9NS23 344 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 TVP23BQ9NYZ1 205 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 CNTRLQ7Z7A1 2325 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 OR2M5A3KFT3 312 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 FTCDNL1E5RQL4 147 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 TCEA1P23193 301 aaKnown RBP16.43■□□□□ 0.22
HMGN1-206ENST00000431390 GDF1P27539 372 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 UQCRC1P31930 480 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 PCYT1AP49585 367 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 FOXK1P85037 733 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 HYAL4Q2M3T9 481 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 LAIR2Q6ISS4 152 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 NANOGNBQ7Z5D8 188 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 OR5M1Q8NGP8 315 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 APH1BQ8WW43 257 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 ARL5BQ96KC2 179 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 GPX7Q96SL4 187 aaPredicted RBP16.43■□□□□ 0.22
HMGN1-206ENST00000431390 NDEL1Q9GZM8 345 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 ENKD1Q9H0I2 346 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 ADNPQ9H2P0 1102 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 ZNF703Q9H7S9 590 aaPredicted RBP16.43■□□□□ 0.22
HMGN1-206ENST00000431390 IL20RAQ9UHF4 553 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 RPH3AQ9Y2J0 694 aaPredicted RBP16.43■□□□□ 0.22
HMGN1-206ENST00000431390 PCDHGA9Q9Y5G4 932 aaKnown RBP16.43■□□□□ 0.22
HMGN1-206ENST00000431390 CORINQ9Y5Q5 1042 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 UBR5O95071 2799 aaPredicted RBP16.42■□□□□ 0.22
HMGN1-206ENST00000431390 WBP4O75554 376 aaKnown RBP16.42■□□□□ 0.22
HMGN1-206ENST00000431390 CCDC159P0C7I6 412 aa16.42■□□□□ 0.22
HMGN1-206ENST00000431390 RFPL3SP0C7P2 107 aa16.42■□□□□ 0.22
HMGN1-206ENST00000431390 TFPIP10646 304 aa16.42■□□□□ 0.22
HMGN1-206ENST00000431390 IDUAP35475 653 aa16.42■□□□□ 0.22
HMGN1-206ENST00000431390 MEOX1P50221 254 aa16.42■□□□□ 0.22
HMGN1-206ENST00000431390 CSNK2BP67870 215 aa16.42■□□□□ 0.22
HMGN1-206ENST00000431390 EFNB1P98172 346 aa16.42■□□□□ 0.22
HMGN1-206ENST00000431390 TOMM20Q15388 145 aa16.42■□□□□ 0.22
HMGN1-206ENST00000431390 SNAPC1Q16533 368 aa16.42■□□□□ 0.22
HMGN1-206ENST00000431390 SGCBQ16585 318 aa16.42■□□□□ 0.22
HMGN1-206ENST00000431390 TBR1Q16650 682 aa16.42■□□□□ 0.22
HMGN1-206ENST00000431390 DPY19L2P2Q6ZN68 376 aa16.42■□□□□ 0.22
HMGN1-206ENST00000431390 ZFP62Q8NB50 900 aaPredicted RBP16.42■□□□□ 0.22
HMGN1-206ENST00000431390 FAM83FQ8NEG4 500 aaPredicted RBP16.42■□□□□ 0.22
HMGN1-206ENST00000431390 OR14L1PQ8NHC6 308 aa16.42■□□□□ 0.22
HMGN1-206ENST00000431390 TM9SF4Q92544 642 aa16.42■□□□□ 0.22
HMGN1-206ENST00000431390 IFT27Q9BW83 186 aa16.42■□□□□ 0.22
HMGN1-206ENST00000431390 TTTY12Q9BZ98 90 aa16.42■□□□□ 0.22
HMGN1-206ENST00000431390 BLOC1S6Q9UL45 172 aa16.42■□□□□ 0.22
HMGN1-206ENST00000431390 HDGFL3Q9Y3E1 203 aa16.42■□□□□ 0.22
HMGN1-206ENST00000431390 COL12A1Q99715 3063 aa16.41■□□□□ 0.22
HMGN1-206ENST00000431390 TRIM64A6NGJ6 449 aa16.41■□□□□ 0.22
HMGN1-206ENST00000431390 H3BML4 177 aa16.41■□□□□ 0.22
HMGN1-206ENST00000431390 SURF4O15260 269 aa16.41■□□□□ 0.22
HMGN1-206ENST00000431390 GLSO94925 669 aaPredicted RBP16.41■□□□□ 0.22
HMGN1-206ENST00000431390 HPNP05981 417 aa16.41■□□□□ 0.22
HMGN1-206ENST00000431390 B3GALT5-AS1P59052 145 aa16.41■□□□□ 0.22
HMGN1-206ENST00000431390 TMEM201Q5SNT2 666 aa16.41■□□□□ 0.22
HMGN1-206ENST00000431390 SLC25A30Q5SVS4 291 aa16.41■□□□□ 0.22
HMGN1-206ENST00000431390 CCDC103Q8IW40 242 aa16.41■□□□□ 0.22
HMGN1-206ENST00000431390 FAM26EQ8N5C1 309 aa16.41■□□□□ 0.22
HMGN1-206ENST00000431390 SCAIQ8N9R8 606 aa16.41■□□□□ 0.22
HMGN1-206ENST00000431390 ATP6V1C2Q8NEY4 427 aa16.41■□□□□ 0.22
HMGN1-206ENST00000431390 OR5J2Q8NH18 312 aa16.41■□□□□ 0.22
HMGN1-206ENST00000431390 SLC25A36Q96CQ1 311 aa16.41■□□□□ 0.22
HMGN1-206ENST00000431390 TAPBPLQ9BX59 468 aa16.41■□□□□ 0.22
HMGN1-206ENST00000431390 ASPNQ9BXN1 380 aa16.41■□□□□ 0.22
HMGN1-206ENST00000431390 QPCTLQ9NXS2 382 aa16.41■□□□□ 0.22
HMGN1-206ENST00000431390 MRPL39Q9NYK5 338 aaKnown RBP16.41■□□□□ 0.22
HMGN1-206ENST00000431390 FREM3P0C091 2139 aa16.41■□□□□ 0.22
HMGN1-206ENST00000431390 SH3D21A4FU49 640 aa16.4■□□□□ 0.22
HMGN1-206ENST00000431390 LIPT2A6NK58 231 aa16.4■□□□□ 0.22
HMGN1-206ENST00000431390 BLOC1S5-TXNDC5H3BN57 136 aa16.4■□□□□ 0.22
HMGN1-206ENST00000431390 LINC01387J3KSC0 135 aa16.4■□□□□ 0.22
HMGN1-206ENST00000431390 M0R129 80 aa16.4■□□□□ 0.22
HMGN1-206ENST00000431390 SLC1A7O00341 560 aa16.4■□□□□ 0.22
HMGN1-206ENST00000431390 PRKYO43930 277 aa16.4■□□□□ 0.22
HMGN1-206ENST00000431390 SFTPCP11686 197 aa16.4■□□□□ 0.22
HMGN1-206ENST00000431390 CRHBPP24387 322 aa16.4■□□□□ 0.22
HMGN1-206ENST00000431390 GRPRP30550 384 aa16.4■□□□□ 0.22
HMGN1-206ENST00000431390 RAC1P63000 192 aa16.4■□□□□ 0.22
HMGN1-206ENST00000431390 SLC6A19Q695T7 634 aa16.4■□□□□ 0.22
HMGN1-206ENST00000431390 IGFL3Q6UXB1 125 aa16.4■□□□□ 0.22
HMGN1-206ENST00000431390 YRDCQ86U90 279 aaKnown RBP16.4■□□□□ 0.22
HMGN1-206ENST00000431390 TCEANCQ8N8B7 351 aa16.4■□□□□ 0.22
HMGN1-206ENST00000431390 LRRC75AQ8NAA5 344 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms