RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 CREB3L2Q70SY1 520 aa11.38□□□□□ -0.59
DEPDC7-203ENST00000427755 SERPINA11Q86U17 422 aa11.38□□□□□ -0.59
DEPDC7-203ENST00000427755 OR1K1Q8NGR3 316 aa11.38□□□□□ -0.59
DEPDC7-203ENST00000427755 PROX1Q92786 737 aa11.38□□□□□ -0.59
DEPDC7-203ENST00000427755 TMEM19Q96HH6 336 aa11.38□□□□□ -0.59
DEPDC7-203ENST00000427755 SLC38A2Q96QD8 506 aa11.38□□□□□ -0.59
DEPDC7-203ENST00000427755 PTDSS2Q9BVG9 487 aa11.38□□□□□ -0.59
DEPDC7-203ENST00000427755 SPATA9Q9BWV2 254 aa11.38□□□□□ -0.59
DEPDC7-203ENST00000427755 NELFAQ9H3P2 528 aa11.38□□□□□ -0.59
DEPDC7-203ENST00000427755 SDR39U1Q9NRG7 319 aaPredicted RBP11.38□□□□□ -0.59
DEPDC7-203ENST00000427755 TMEM45AQ9NWC5 275 aa11.38□□□□□ -0.59
DEPDC7-203ENST00000427755 ADPRHL2Q9NX46 363 aa11.38□□□□□ -0.59
DEPDC7-203ENST00000427755 CALML5Q9NZT1 146 aa11.38□□□□□ -0.59
DEPDC7-203ENST00000427755 ZIM2Q9NZV7 527 aa11.38□□□□□ -0.59
DEPDC7-203ENST00000427755 CRNNQ9UBG3 495 aaPredicted RBP11.38□□□□□ -0.59
DEPDC7-203ENST00000427755 CDC42EP3Q9UKI2 254 aa11.38□□□□□ -0.59
DEPDC7-203ENST00000427755 PMF1-BGLAPU3KQ54 211 aa11.38□□□□□ -0.59
DEPDC7-203ENST00000427755 ARPC4-TTLL3A0A0A6YYG9 625 aa11.37□□□□□ -0.59
DEPDC7-203ENST00000427755 FTCDNL1E5RQL4 147 aa11.37□□□□□ -0.59
DEPDC7-203ENST00000427755 FZD7O75084 574 aa11.37□□□□□ -0.59
DEPDC7-203ENST00000427755 UPK3AO75631 287 aa11.37□□□□□ -0.59
DEPDC7-203ENST00000427755 VAMP5O95183 116 aa11.37□□□□□ -0.59
DEPDC7-203ENST00000427755 BMP4P12644 408 aa11.37□□□□□ -0.59
DEPDC7-203ENST00000427755 USF1P22415 310 aaPredicted RBP11.37□□□□□ -0.59
DEPDC7-203ENST00000427755 COPZ1P61923 177 aa11.37□□□□□ -0.59
DEPDC7-203ENST00000427755 EGR4Q05215 589 aa11.37□□□□□ -0.59
DEPDC7-203ENST00000427755 LARS2Q15031 903 aaKnown RBP11.37□□□□□ -0.59
DEPDC7-203ENST00000427755 ZSWIM7Q19AV6 140 aa11.37□□□□□ -0.59
DEPDC7-203ENST00000427755 NXNQ6DKJ4 435 aa11.37□□□□□ -0.59
DEPDC7-203ENST00000427755 TMEM225Q6GV28 225 aa11.37□□□□□ -0.59
DEPDC7-203ENST00000427755 MSANTD1Q6ZTZ1 278 aa11.37□□□□□ -0.59
DEPDC7-203ENST00000427755 ABHD12BQ7Z5M8 362 aaPredicted RBP11.37□□□□□ -0.59
DEPDC7-203ENST00000427755 OR9I1Q8NGQ6 314 aa11.37□□□□□ -0.59
DEPDC7-203ENST00000427755 STK35Q8TDR2 534 aa11.37□□□□□ -0.59
DEPDC7-203ENST00000427755 BCL2L2Q92843 193 aaPredicted RBP11.37□□□□□ -0.59
DEPDC7-203ENST00000427755 FBXO17Q96EF6 278 aa11.37□□□□□ -0.59
DEPDC7-203ENST00000427755 SORCS2Q96PQ0 1159 aa11.37□□□□□ -0.59
DEPDC7-203ENST00000427755 ALKBH3Q96Q83 286 aaPredicted RBP11.37□□□□□ -0.59
DEPDC7-203ENST00000427755 KATNB1Q9BVA0 655 aa11.37□□□□□ -0.59
DEPDC7-203ENST00000427755 TAPBPLQ9BX59 468 aa11.37□□□□□ -0.59
DEPDC7-203ENST00000427755 RSPO3Q9BXY4 272 aaPredicted RBP11.37□□□□□ -0.59
DEPDC7-203ENST00000427755 RASD1Q9Y272 281 aa11.37□□□□□ -0.59
DEPDC7-203ENST00000427755 A0A096LPI6 279 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 A0A0G2JPF8 293 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 HNRNPCL2B2RXH8 293 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 HNRNPCL3B7ZW38 293 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 ZNF587BE7ETH6 402 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 SLCO1B7G3V0H7 640 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 NR5A2O00482 541 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 HNRNPCL1O60812 293 aaKnown RBP11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 ZNF432O94892 652 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 IGLV1-44P01699 117 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 NUDT7P0C024 238 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 HNRNPCL4P0DMR1 293 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 ZNF16P17020 682 aaPredicted RBP11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 HOXB9P17482 250 aaPredicted RBP11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 HOXC5Q00444 222 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 PRAMEF8Q5VWM4 474 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 PRAMEF7Q5VXH5 474 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 CYB5R2Q6BCY4 276 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 NIPAL3Q6P499 406 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 MFSD8Q8NHS3 518 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 MAGEE2Q8TD90 523 aaPredicted RBP11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 MGARPQ8TDB4 240 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 TMEM158Q8WZ71 300 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 GTF2H4Q92759 462 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 ITCHQ96J02 903 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 ZNF317Q96PQ6 595 aaPredicted RBP11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 OR52B2Q96RD2 323 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 KCNK17Q96T54 332 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 LINC00470Q9BZP3 86 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 SEC61A2Q9H9S3 476 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 BCL2L10Q9HD36 194 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 CA10Q9NS85 328 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 THUMPD1Q9NXG2 353 aaKnown RBP11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 B3GAT1Q9P2W7 334 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 IFT52Q9Y366 437 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 PCDHB14Q9Y5E9 798 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 RTTNQ86VV8 2226 aa11.36□□□□□ -0.59
DEPDC7-203ENST00000427755 A0A096LPE4 126 aa11.35□□□□□ -0.59
DEPDC7-203ENST00000427755 A0A1W2PPZ6 126 aa11.35□□□□□ -0.59
DEPDC7-203ENST00000427755 OR6C65A6NJZ3 312 aa11.35□□□□□ -0.59
DEPDC7-203ENST00000427755 PHF1O43189 567 aaPredicted RBP11.35□□□□□ -0.59
DEPDC7-203ENST00000427755 KRT33AO76009 404 aa11.35□□□□□ -0.59
DEPDC7-203ENST00000427755 ANP32DO95626 131 aa11.35□□□□□ -0.59
DEPDC7-203ENST00000427755 CECR9P0C854 216 aa11.35□□□□□ -0.59
DEPDC7-203ENST00000427755 PNMTP11086 282 aa11.35□□□□□ -0.59
DEPDC7-203ENST00000427755 BMP2P12643 396 aa11.35□□□□□ -0.59
DEPDC7-203ENST00000427755 NCF2P19878 526 aaPredicted RBP11.35□□□□□ -0.59
DEPDC7-203ENST00000427755 PAX7P23759 505 aa11.35□□□□□ -0.59
DEPDC7-203ENST00000427755 CALCRP30988 508 aa11.35□□□□□ -0.59
DEPDC7-203ENST00000427755 SERPINF1P36955 418 aa11.35□□□□□ -0.59
DEPDC7-203ENST00000427755 PDLIM4P50479 330 aa11.35□□□□□ -0.59
DEPDC7-203ENST00000427755 POLR2JP52435 117 aaKnown RBP11.35□□□□□ -0.59
DEPDC7-203ENST00000427755 SLC18A1P54219 525 aa11.35□□□□□ -0.59
DEPDC7-203ENST00000427755 TUBA1BP68363 451 aa11.35□□□□□ -0.59
DEPDC7-203ENST00000427755 TUBA4AP68366 448 aa11.35□□□□□ -0.59
DEPDC7-203ENST00000427755 LSM11P83369 360 aaKnown RBP eCLIP11.35□□□□□ -0.59
DEPDC7-203ENST00000427755 NAAAQ02083 359 aa11.35□□□□□ -0.59
DEPDC7-203ENST00000427755 RGNQ15493 299 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms