RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 CREB3L2Q70SY1 520 aa16.2■□□□□ 0.18
GPC1-205ENST00000427506 ABHD12BQ7Z5M8 362 aaPredicted RBP16.2■□□□□ 0.18
GPC1-205ENST00000427506 RETREG3Q86VR2 466 aa16.2■□□□□ 0.18
GPC1-205ENST00000427506 COMTD1Q86VU5 262 aa16.2■□□□□ 0.18
GPC1-205ENST00000427506 SMR3AQ99954 134 aa16.2■□□□□ 0.18
GPC1-205ENST00000427506 C1QTNF6Q9BXI9 259 aa16.2■□□□□ 0.18
GPC1-205ENST00000427506 CISD1Q9NZ45 108 aaKnown RBP16.2■□□□□ 0.18
GPC1-205ENST00000427506 TESQ9UGI8 421 aaKnown RBP16.2■□□□□ 0.18
GPC1-205ENST00000427506 POU2F3Q9UKI9 436 aa16.2■□□□□ 0.18
GPC1-205ENST00000427506 H7C1Q1 480 aa16.19■□□□□ 0.18
GPC1-205ENST00000427506 PDLIM1O00151 329 aa16.19■□□□□ 0.18
GPC1-205ENST00000427506 OR2T1O43869 369 aa16.19■□□□□ 0.18
GPC1-205ENST00000427506 SOD3P08294 240 aa16.19■□□□□ 0.18
GPC1-205ENST00000427506 PTAFRP25105 342 aa16.19■□□□□ 0.18
GPC1-205ENST00000427506 P2RY4P51582 365 aa16.19■□□□□ 0.18
GPC1-205ENST00000427506 IL1RL1Q01638 556 aa16.19■□□□□ 0.18
GPC1-205ENST00000427506 EGR4Q05215 589 aa16.19■□□□□ 0.18
GPC1-205ENST00000427506 SF3A3Q12874 501 aaKnown RBP eCLIP16.19■□□□□ 0.18
GPC1-205ENST00000427506 SELPLGQ14242 412 aa16.19■□□□□ 0.18
GPC1-205ENST00000427506 SLC22A25Q6T423 547 aa16.19■□□□□ 0.18
GPC1-205ENST00000427506 C5orf46Q6UWT4 87 aa16.19■□□□□ 0.18
GPC1-205ENST00000427506 C6orf89Q6UWU4 347 aa16.19■□□□□ 0.18
GPC1-205ENST00000427506 RANBP3LQ86VV4 465 aaPredicted RBP16.19■□□□□ 0.18
GPC1-205ENST00000427506 KDM8Q8N371 416 aa16.19■□□□□ 0.18
GPC1-205ENST00000427506 C17orf78Q8N4C9 275 aa16.19■□□□□ 0.18
GPC1-205ENST00000427506 SMYD1Q8NB12 490 aa16.19■□□□□ 0.18
GPC1-205ENST00000427506 C1orf162Q8NEQ5 155 aaPredicted RBP16.19■□□□□ 0.18
GPC1-205ENST00000427506 SLC38A4Q969I6 547 aa16.19■□□□□ 0.18
GPC1-205ENST00000427506 SLC47A1Q96FL8 570 aa16.19■□□□□ 0.18
GPC1-205ENST00000427506 TRMT61AQ96FX7 289 aaKnown RBP16.19■□□□□ 0.18
GPC1-205ENST00000427506 RADILQ96JH8 1075 aa16.19■□□□□ 0.18
GPC1-205ENST00000427506 PTDSS2Q9BVG9 487 aa16.19■□□□□ 0.18
GPC1-205ENST00000427506 ALG2Q9H553 416 aa16.19■□□□□ 0.18
GPC1-205ENST00000427506 EVA1AQ9H8M9 152 aa16.19■□□□□ 0.18
GPC1-205ENST00000427506 ZNF701Q9NV72 531 aaPredicted RBP16.19■□□□□ 0.18
GPC1-205ENST00000427506 FAIMQ9NVQ4 179 aa16.19■□□□□ 0.18
GPC1-205ENST00000427506 MGAT4BQ9UQ53 548 aa16.19■□□□□ 0.18
GPC1-205ENST00000427506 AMDHD2Q9Y303 409 aa16.19■□□□□ 0.18
GPC1-205ENST00000427506 SHISA9B4DS77 424 aa16.18■□□□□ 0.18
GPC1-205ENST00000427506 FTCDNL1E5RQL4 147 aa16.18■□□□□ 0.18
GPC1-205ENST00000427506 SMAD7O15105 426 aaKnown RBP16.18■□□□□ 0.18
GPC1-205ENST00000427506 MFN2O95140 757 aa16.18■□□□□ 0.18
GPC1-205ENST00000427506 OPN1SWP03999 348 aa16.18■□□□□ 0.18
GPC1-205ENST00000427506 DANCRP0C864 163 aa16.18■□□□□ 0.18
GPC1-205ENST00000427506 PAX1P15863 534 aa16.18■□□□□ 0.18
GPC1-205ENST00000427506 ZNF43P17038 809 aa16.18■□□□□ 0.18
GPC1-205ENST00000427506 CBLP22681 906 aa16.18■□□□□ 0.18
GPC1-205ENST00000427506 SELENOPP49908 381 aa16.18■□□□□ 0.18
GPC1-205ENST00000427506 ARFIP2P53365 341 aa16.18■□□□□ 0.18
GPC1-205ENST00000427506 DMTNQ08495 405 aa16.18■□□□□ 0.18
GPC1-205ENST00000427506 OR1Q1Q15612 314 aa16.18■□□□□ 0.18
GPC1-205ENST00000427506 FAM69AQ5T7M9 428 aa16.18■□□□□ 0.18
GPC1-205ENST00000427506 FAM91A1Q658Y4 838 aa16.18■□□□□ 0.18
GPC1-205ENST00000427506 KLHL24Q6TFL4 600 aa16.18■□□□□ 0.18
GPC1-205ENST00000427506 CLEC9AQ6UXN8 241 aa16.18■□□□□ 0.18
GPC1-205ENST00000427506 PTOV1Q86YD1 416 aa16.18■□□□□ 0.18
GPC1-205ENST00000427506 DEPDC4Q8N2C3 294 aa16.18■□□□□ 0.18
GPC1-205ENST00000427506 TAAR8Q969N4 342 aa16.18■□□□□ 0.18
GPC1-205ENST00000427506 SLC17A5Q9NRA2 495 aa16.18■□□□□ 0.18
GPC1-205ENST00000427506 MAGED1Q9Y5V3 778 aaPredicted RBP16.18■□□□□ 0.18
GPC1-205ENST00000427506 TRAV36DV7A0A075B6V5 113 aa16.17■□□□□ 0.18
GPC1-205ENST00000427506 TRIM64A6NGJ6 449 aa16.17■□□□□ 0.18
GPC1-205ENST00000427506 TRIM64BA6NI03 449 aa16.17■□□□□ 0.18
GPC1-205ENST00000427506 OR6C65A6NJZ3 312 aa16.17■□□□□ 0.18
GPC1-205ENST00000427506 ZNF587BE7ETH6 402 aa16.17■□□□□ 0.18
GPC1-205ENST00000427506 M0QX08 132 aa16.17■□□□□ 0.18
GPC1-205ENST00000427506 AIM2O14862 343 aa16.17■□□□□ 0.18
GPC1-205ENST00000427506 VIMP08670 466 aaKnown RBP16.17■□□□□ 0.18
GPC1-205ENST00000427506 CD40P25942 277 aa16.17■□□□□ 0.18
GPC1-205ENST00000427506 CDKN1AP38936 164 aa16.17■□□□□ 0.18
GPC1-205ENST00000427506 CLDN17P56750 224 aa16.17■□□□□ 0.18
GPC1-205ENST00000427506 PRPS1P60891 318 aa16.17■□□□□ 0.18
GPC1-205ENST00000427506 C1DQ13901 141 aaKnown RBP16.17■□□□□ 0.18
GPC1-205ENST00000427506 CYLC2Q14093 348 aaPredicted RBP16.17■□□□□ 0.18
GPC1-205ENST00000427506 MMEL1Q495T6 779 aa16.17■□□□□ 0.18
GPC1-205ENST00000427506 Q71RC1 249 aaPredicted RBP16.17■□□□□ 0.18
GPC1-205ENST00000427506 NET1Q7Z628 596 aaPredicted RBP16.17■□□□□ 0.18
GPC1-205ENST00000427506 EPHX4Q8IUS5 362 aa16.17■□□□□ 0.18
GPC1-205ENST00000427506 SLC30A8Q8IWU4 369 aa16.17■□□□□ 0.18
GPC1-205ENST00000427506 WDR31Q8NA23 367 aa16.17■□□□□ 0.18
GPC1-205ENST00000427506 SLC26A7Q8TE54 656 aa16.17■□□□□ 0.18
GPC1-205ENST00000427506 AMBRA1Q9C0C7 1298 aa16.17■□□□□ 0.18
GPC1-205ENST00000427506 MRGBPQ9NV56 204 aa16.17■□□□□ 0.18
GPC1-205ENST00000427506 FGFR1OP2Q9NVK5 253 aa16.17■□□□□ 0.18
GPC1-205ENST00000427506 SEC14L4Q9UDX3 406 aa16.17■□□□□ 0.18
GPC1-205ENST00000427506 PRR14LQ5THK1 2151 aa16.17■□□□□ 0.18
GPC1-205ENST00000427506 FAM171A2A8MVW0 826 aa16.16■□□□□ 0.18
GPC1-205ENST00000427506 M0R082 166 aa16.16■□□□□ 0.18
GPC1-205ENST00000427506 WNT11O96014 354 aa16.16■□□□□ 0.18
GPC1-205ENST00000427506 GRPRP30550 384 aa16.16■□□□□ 0.18
GPC1-205ENST00000427506 PCBP3P57721 371 aaKnown RBP16.16■□□□□ 0.18
GPC1-205ENST00000427506 LGALS3BPQ08380 585 aa16.16■□□□□ 0.18
GPC1-205ENST00000427506 SPOCK1Q08629 439 aa16.16■□□□□ 0.18
GPC1-205ENST00000427506 PGGHGQ32M88 737 aa16.16■□□□□ 0.18
GPC1-205ENST00000427506 CIARTQ8N365 385 aaPredicted RBP16.16■□□□□ 0.18
GPC1-205ENST00000427506 C10orf53Q8N6V4 93 aa16.16■□□□□ 0.18
GPC1-205ENST00000427506 OR10A6Q8NH74 314 aa16.16■□□□□ 0.18
GPC1-205ENST00000427506 ZNF417Q8TAU3 575 aa16.16■□□□□ 0.18
GPC1-205ENST00000427506 OXGR1Q96P68 337 aa16.16■□□□□ 0.18
GPC1-205ENST00000427506 ALKBH3Q96Q83 286 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms