RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 PVALBP20472 110 aaPredicted RBP6.9□□□□□ -1.31
LINC01108-201ENST00000427276 HTR2AP28223 471 aa6.9□□□□□ -1.31
LINC01108-201ENST00000427276 GABRA3P34903 492 aa6.9□□□□□ -1.31
LINC01108-201ENST00000427276 FAUP35544 74 aaKnown RBP6.9□□□□□ -1.31
LINC01108-201ENST00000427276 REEP5Q00765 189 aa6.9□□□□□ -1.31
LINC01108-201ENST00000427276 CDK5R1Q15078 307 aa6.9□□□□□ -1.31
LINC01108-201ENST00000427276 DMKNQ6E0U4 476 aaPredicted RBP6.9□□□□□ -1.31
LINC01108-201ENST00000427276 MRM1Q6IN84 353 aaKnown RBP6.9□□□□□ -1.31
LINC01108-201ENST00000427276 CFAP161Q6P656 301 aa6.9□□□□□ -1.31
LINC01108-201ENST00000427276 SEZ6L2Q6UXD5 910 aa6.9□□□□□ -1.31
LINC01108-201ENST00000427276 UNQ6126/PRO20091Q6UXV3 157 aa6.9□□□□□ -1.31
LINC01108-201ENST00000427276 ZNF627Q7L945 461 aa6.9□□□□□ -1.31
LINC01108-201ENST00000427276 RASGRP3Q8IV61 690 aa6.9□□□□□ -1.31
LINC01108-201ENST00000427276 BEST3Q8N1M1 668 aa6.9□□□□□ -1.31
LINC01108-201ENST00000427276 MUC20Q8N307 709 aaPredicted RBP6.9□□□□□ -1.31
LINC01108-201ENST00000427276 ZNF676Q8N7Q3 588 aa6.9□□□□□ -1.31
LINC01108-201ENST00000427276 OR5K2Q8NHB8 316 aa6.9□□□□□ -1.31
LINC01108-201ENST00000427276 CASTOR1Q8WTX7 329 aa6.9□□□□□ -1.31
LINC01108-201ENST00000427276 KISS1RQ969F8 398 aaPredicted RBP6.9□□□□□ -1.31
LINC01108-201ENST00000427276 ZNF75AQ96N20 296 aa6.9□□□□□ -1.31
LINC01108-201ENST00000427276 NKX6-2Q9C056 277 aaPredicted RBP6.9□□□□□ -1.31
LINC01108-201ENST00000427276 CDH23Q9H251 3354 aa6.9□□□□□ -1.31
LINC01108-201ENST00000427276 DPEP2Q9H4A9 486 aa6.9□□□□□ -1.31
LINC01108-201ENST00000427276 ZNF230Q9UIE0 474 aaPredicted RBP6.9□□□□□ -1.31
LINC01108-201ENST00000427276 ERVK-19Q9WJR5 959 aa6.9□□□□□ -1.31
LINC01108-201ENST00000427276 NOP16Q9Y3C1 178 aaKnown RBP6.9□□□□□ -1.31
LINC01108-201ENST00000427276 TCF20Q9UGU0 1960 aaKnown RBP6.89□□□□□ -1.31
LINC01108-201ENST00000427276 KANTRA0A1W2PQU2 76 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 BHLHE40O14503 412 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 PRAMEF2O60811 474 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 ITGA10O75578 1167 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 CXCL14O95715 111 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 HIST1H2ABP04908 130 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 ZNF806P0C7X5 589 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 CBR1P16152 277 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 TAS2R20P59543 309 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 SHC2P98077 582 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 TNFRSF17Q02223 184 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 BDH1Q02338 343 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 PRDX1Q06830 199 aaKnown RBP6.89□□□□□ -1.31
LINC01108-201ENST00000427276 PLA2G7Q13093 441 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 NKPD1Q17RQ9 610 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 AMZ1Q400G9 498 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 PDSS1Q5T2R2 415 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 STPG1Q5TH74 334 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 HIST3H2AQ7L7L0 130 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 MRGPREQ86SM8 312 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 CBLN2Q8IUK8 224 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 TCEAL8Q8IYN2 117 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 SHISA5Q8N114 240 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 LINC00469Q8N7U9 141 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 GATSQ8NAP1 163 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 KREMEN2Q8NCW0 462 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 BPIFCQ8NFQ6 507 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 TTLQ8NG68 377 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 OR51D1Q8NGF3 324 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 OR10G6Q8NH81 332 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 OR1S1Q8NH92 325 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 STK35Q8TDR2 534 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 HIST1H2ACQ93077 130 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 TRIM43Q96BQ3 446 aaPredicted RBP6.89□□□□□ -1.31
LINC01108-201ENST00000427276 MS4A6EQ96DS6 147 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 SMIM19Q96E16 107 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 ZNF514Q96K75 400 aaPredicted RBP6.89□□□□□ -1.31
LINC01108-201ENST00000427276 ADAD1Q96M93 576 aaKnown RBP6.89□□□□□ -1.31
LINC01108-201ENST00000427276 INSM2Q96T92 566 aaPredicted RBP6.89□□□□□ -1.31
LINC01108-201ENST00000427276 AICDAQ9GZX7 198 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 ANKRD19PQ9H560 264 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 PELI2Q9HAT8 420 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 TREM1Q9NP99 234 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 SPHK1Q9NYA1 384 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 TAS2R5Q9NYW4 299 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 GMEB2Q9UKD1 530 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 MOKQ9UQ07 419 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 F5P12259 2224 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 ARPC4-TTLL3A0A0A6YYG9 625 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 TMEM72A0PK05 275 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 ZNF98A6NK75 572 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 C4orf47A7E2U8 309 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 F5H0A9 414 aaPredicted RBP6.89□□□□□ -1.31
LINC01108-201ENST00000427276 H7C1C5 153 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 M0QYG6 137 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 LILRB5O75023 590 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 HLA-DQA2P01906 255 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 ZNF888P0CJ79 500 aaPredicted RBP6.89□□□□□ -1.31
LINC01108-201ENST00000427276 DDX6P26196 483 aaKnown RBP eCLIP6.89□□□□□ -1.31
LINC01108-201ENST00000427276 PRKAR1BP31321 381 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 LCN6P62502 163 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 SLC7A9P82251 487 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 ZNF234Q14588 700 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 PRRT3Q5FWE3 981 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 ZNF660Q6AZW8 331 aaPredicted RBP6.89□□□□□ -1.31
LINC01108-201ENST00000427276 SLC48A1Q6P1K1 146 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 ABHD17CQ6PCB6 329 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 CDH26Q8IXH8 852 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 LNX2Q8N448 690 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 OR2AK2Q8NG84 335 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 OR4C16Q8NGL9 310 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 HLA-CQ95604 372 aa6.89□□□□□ -1.31
LINC01108-201ENST00000427276 RASD2Q96D21 266 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms