RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 HELZ2Q9BYK8 2649 aaKnown RBP6.61□□□□□ -1.35
LINC01049-201ENST00000426840 LIPT2A6NK58 231 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 ZNF814B7Z6K7 855 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 FTCDNL1E5RQL4 147 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 SMAD9O15198 467 aaKnown RBP6.61□□□□□ -1.35
LINC01049-201ENST00000426840 CHP2O43745 196 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 FZD7O75084 574 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 OR5F1O95221 314 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 SYNGR4O95473 234 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 IFNW1P05000 195 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 TMIGD3P0DMS9 266 aaPredicted RBP6.61□□□□□ -1.35
LINC01049-201ENST00000426840 THRBP10828 461 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 AGAP20933 346 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 FPR1P21462 350 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 SLC7A1P30825 629 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 IDUAP35475 653 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 PER3P56645 1201 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 OR2B6P58173 313 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 H3F3AP84243 136 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 VLDLRP98155 873 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 GUSBP1Q15486 140 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 ZNF239Q16600 458 aaKnown RBP6.61□□□□□ -1.35
LINC01049-201ENST00000426840 C1orf140Q5VVS0 124 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 XKRXQ6PP77 449 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 DEF8Q6ZN54 512 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 CCDC121Q6ZUS5 278 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 MRGPRGQ86SM5 289 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 P3H2Q8IVL5 708 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 ZNF808Q8N4W9 903 aaPredicted RBP6.61□□□□□ -1.35
LINC01049-201ENST00000426840 LILRB4Q8NHJ6 448 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 MFSD8Q8NHS3 518 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 SSC4DQ8WTU2 575 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 TAAR8Q969N4 342 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 CPNE4Q96A23 557 aaPredicted RBP6.61□□□□□ -1.35
LINC01049-201ENST00000426840 SDCCAG3Q96C92 435 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 INTS12Q96CB8 462 aaKnown RBP6.61□□□□□ -1.35
LINC01049-201ENST00000426840 MPP4Q96JB8 637 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 PRRC1Q96M27 445 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 TM9SF2Q99805 663 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 TMEM43Q9BTV4 400 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 ZNF426Q9BUY5 554 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 LRMDAQ9H2I8 198 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 TIGARQ9NQ88 270 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 MAN2C1Q9NTJ4 1040 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 NDUFAF4Q9P032 175 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 SLC7A8Q9UHI5 535 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 ING1Q9UK53 422 aaPredicted RBP6.61□□□□□ -1.35
LINC01049-201ENST00000426840 POMPQ9Y244 141 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 ENPP4Q9Y6X5 453 aa6.61□□□□□ -1.35
LINC01049-201ENST00000426840 TRAV36DV7A0A075B6V5 113 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 IGHV3-15A0A0B4J1V0 119 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 HSPB2A8KAH6 182 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 DNPH1O43598 174 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 OR2T1O43869 369 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 CYTIPO60759 359 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 RAMP1O60894 148 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 TNFSF13O75888 250 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 DIRAS1O95057 198 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 IL18BPO95998 194 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 WNT11O96014 354 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 BGLAPP02818 100 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 CRHP06850 196 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 RHCEP18577 417 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 CTSSP25774 331 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 CHRNB4P30926 498 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 KIR2DL2P43627 348 aaPredicted RBP6.6□□□□□ -1.35
LINC01049-201ENST00000426840 RPS5P46782 204 aaKnown RBP6.6□□□□□ -1.35
LINC01049-201ENST00000426840 P2RY4P51582 365 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 SMSP52788 366 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 GP2P55259 537 aaKnown RBP6.6□□□□□ -1.35
LINC01049-201ENST00000426840 TAS2R41P59536 307 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 CSNK2A1P68400 391 aaPredicted RBP6.6□□□□□ -1.35
LINC01049-201ENST00000426840 SLC35A1P78382 337 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 ST3GAL3Q11203 375 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 OR7A5Q15622 319 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 HSPB2Q16082 182 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 MTX3Q5HYI7 312 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 GTF2IRD2BQ6EKJ0 949 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 OR2A2Q6IF42 318 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 TTC33Q6PID6 262 aaPredicted RBP6.6□□□□□ -1.35
LINC01049-201ENST00000426840 C5orf46Q6UWT4 87 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 NHLRC1Q6VVB1 395 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 FCRLAQ7L513 359 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 PIWIL3Q7Z3Z3 882 aaKnown RBP6.6□□□□□ -1.35
LINC01049-201ENST00000426840 P4HA3Q7Z4N8 544 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 GTF2IRD2Q86UP8 949 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 CCDC103Q8IW40 242 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 GCNT2Q8N0V5 402 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 SLC43A2Q8N370 569 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 TMEM99Q8N816 258 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 PIK3C3Q8NEB9 887 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 OR6S1Q8NH40 331 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 RNF128Q8TEB7 428 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 ASB5Q8WWX0 329 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 CCDC124Q96CT7 223 aaKnown RBP6.6□□□□□ -1.35
LINC01049-201ENST00000426840 DHRS1Q96LJ7 313 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 HS6ST2Q96MM7 605 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 ZFP3Q96NJ6 502 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 PSMG3-AS1Q96PY0 264 aa6.6□□□□□ -1.35
LINC01049-201ENST00000426840 ZNF300Q96RE9 604 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms