RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 MIPOL1Q8TD10 442 aa12.66□□□□□ -0.38
PDAP1-202ENST00000426447 MS4A5Q9H3V2 200 aa12.66□□□□□ -0.38
PDAP1-202ENST00000426447 CRLF2Q9HC73 371 aa12.66□□□□□ -0.38
PDAP1-202ENST00000426447 TREM2Q9NZC2 230 aa12.66□□□□□ -0.38
PDAP1-202ENST00000426447 REV1Q9UBZ9 1251 aa12.66□□□□□ -0.38
PDAP1-202ENST00000426447 CMAHPQ9Y471 501 aa12.66□□□□□ -0.38
PDAP1-202ENST00000426447 CFAP73A6NFT4 308 aa12.65□□□□□ -0.38
PDAP1-202ENST00000426447 UPK3AO75631 287 aa12.65□□□□□ -0.38
PDAP1-202ENST00000426447 VAMP5O95183 116 aa12.65□□□□□ -0.38
PDAP1-202ENST00000426447 CPSF4O95639 269 aaKnown RBP12.65□□□□□ -0.38
PDAP1-202ENST00000426447 IGKV3-15P01624 115 aa12.65□□□□□ -0.38
PDAP1-202ENST00000426447 SAGP10523 405 aaPredicted RBP12.65□□□□□ -0.38
PDAP1-202ENST00000426447 G6PDP11413 515 aa12.65□□□□□ -0.38
PDAP1-202ENST00000426447 KRT4P19013 534 aa12.65□□□□□ -0.38
PDAP1-202ENST00000426447 TCN1P20061 433 aaPredicted RBP12.65□□□□□ -0.38
PDAP1-202ENST00000426447 EPHA1P21709 976 aa12.65□□□□□ -0.38
PDAP1-202ENST00000426447 UQCRC2P22695 453 aa12.65□□□□□ -0.38
PDAP1-202ENST00000426447 ARR3P36575 388 aa12.65□□□□□ -0.38
PDAP1-202ENST00000426447 CAPZA2P47755 286 aa12.65□□□□□ -0.38
PDAP1-202ENST00000426447 SH3BGRP55822 239 aaPredicted RBP12.65□□□□□ -0.38
PDAP1-202ENST00000426447 ARF1P84077 181 aaKnown RBP12.65□□□□□ -0.38
PDAP1-202ENST00000426447 ROR2Q01974 943 aaKnown RBP12.65□□□□□ -0.38
PDAP1-202ENST00000426447 SNTB2Q13425 540 aaKnown RBP12.65□□□□□ -0.38
PDAP1-202ENST00000426447 GNA13Q14344 377 aa12.65□□□□□ -0.38
PDAP1-202ENST00000426447 PCLAFQ15004 111 aa12.65□□□□□ -0.38
PDAP1-202ENST00000426447 XKR7Q5GH72 579 aa12.65□□□□□ -0.38
PDAP1-202ENST00000426447 AP1ARQ63HQ0 302 aa12.65□□□□□ -0.38
PDAP1-202ENST00000426447 KRT80Q6KB66 452 aa12.65□□□□□ -0.38
PDAP1-202ENST00000426447 LINGO2Q7L985 606 aa12.65□□□□□ -0.38
PDAP1-202ENST00000426447 CMIPQ8IY22 773 aa12.65□□□□□ -0.38
PDAP1-202ENST00000426447 MNS1Q8NEH6 495 aa12.65□□□□□ -0.38
PDAP1-202ENST00000426447 IL17RDQ8NFM7 739 aa12.65□□□□□ -0.38
PDAP1-202ENST00000426447 TUBGCP3Q96CW5 907 aa12.65□□□□□ -0.38
PDAP1-202ENST00000426447 C3orf30Q96M34 536 aa12.65□□□□□ -0.38
PDAP1-202ENST00000426447 IGHV2OR16-5A0A0B4J2B6 119 aa12.64□□□□□ -0.39
PDAP1-202ENST00000426447 SMIM23A6NLE4 172 aa12.64□□□□□ -0.39
PDAP1-202ENST00000426447 M0R233 179 aa12.64□□□□□ -0.39
PDAP1-202ENST00000426447 RNASET2O00584 256 aaKnown RBP12.64□□□□□ -0.39
PDAP1-202ENST00000426447 SYNGR3O43761 229 aa12.64□□□□□ -0.39
PDAP1-202ENST00000426447 NPHS1O60500 1241 aa12.64□□□□□ -0.39
PDAP1-202ENST00000426447 TFP02787 698 aa12.64□□□□□ -0.39
PDAP1-202ENST00000426447 IL7RP16871 459 aa12.64□□□□□ -0.39
PDAP1-202ENST00000426447 COL8A2P25067 703 aa12.64□□□□□ -0.39
PDAP1-202ENST00000426447 CHI3L1P36222 383 aaPredicted RBP12.64□□□□□ -0.39
PDAP1-202ENST00000426447 CLDN8P56748 225 aa12.64□□□□□ -0.39
PDAP1-202ENST00000426447 MAD2L1Q13257 205 aaPredicted RBP12.64□□□□□ -0.39
PDAP1-202ENST00000426447 GSTA3Q16772 222 aa12.64□□□□□ -0.39
PDAP1-202ENST00000426447 SLC9B1Q4ZJI4 515 aa12.64□□□□□ -0.39
PDAP1-202ENST00000426447 AWAT1Q58HT5 328 aa12.64□□□□□ -0.39
PDAP1-202ENST00000426447 ZNF311Q5JNZ3 666 aa12.64□□□□□ -0.39
PDAP1-202ENST00000426447 PRAMEF8Q5VWM4 474 aa12.64□□□□□ -0.39
PDAP1-202ENST00000426447 PRAMEF7Q5VXH5 474 aa12.64□□□□□ -0.39
PDAP1-202ENST00000426447 MYPOPQ86VE0 399 aaPredicted RBP12.64□□□□□ -0.39
PDAP1-202ENST00000426447 CARM1Q86X55 608 aa12.64□□□□□ -0.39
PDAP1-202ENST00000426447 VPS37AQ8NEZ2 397 aa12.64□□□□□ -0.39
PDAP1-202ENST00000426447 RDH5Q92781 318 aa12.64□□□□□ -0.39
PDAP1-202ENST00000426447 SUCNR1Q9BXA5 334 aa12.64□□□□□ -0.39
PDAP1-202ENST00000426447 DPY30Q9C005 99 aa12.64□□□□□ -0.39
PDAP1-202ENST00000426447 MEGF8Q7Z7M0 2845 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 TRAV20A0A0B4J274 112 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 PPIHO43447 177 aaKnown RBP12.63□□□□□ -0.39
PDAP1-202ENST00000426447 PNPP00491 289 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 CHRM4P08173 479 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 IGFBP1P08833 259 aaPredicted RBP12.63□□□□□ -0.39
PDAP1-202ENST00000426447 GAAP10253 952 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 ANPEPP15144 967 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 ACHEP22303 614 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 ALDH3A1P30838 453 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 TMEM33P57088 247 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 PLAURQ03405 335 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 FUT5Q11128 374 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 BNIP2Q12982 314 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 PDLIM3Q53GG5 364 aaPredicted RBP12.63□□□□□ -0.39
PDAP1-202ENST00000426447 ELFN2Q5R3F8 820 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 PRR31Q5SQ13 230 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 REP15Q6BDI9 236 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 ANKRD46Q86W74 232 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 EPHX4Q8IUS5 362 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 IFT20Q8IY31 132 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 C4orf33Q8N1A6 199 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 CADM2Q8N3J6 435 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 LINC00470Q9BZP3 86 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 NELFAQ9H3P2 528 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 MTHFD2LQ9H903 347 aaPredicted RBP12.63□□□□□ -0.39
PDAP1-202ENST00000426447 NOX3Q9HBY0 568 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 MARCOQ9UEW3 520 aaPredicted RBP12.63□□□□□ -0.39
PDAP1-202ENST00000426447 RASD1Q9Y272 281 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 PCDHGB1Q9Y5G3 927 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 NOX1Q9Y5S8 564 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 TENM1Q9UKZ4 2725 aa12.63□□□□□ -0.39
PDAP1-202ENST00000426447 LOC105371242A0A075B767 164 aa12.62□□□□□ -0.39
PDAP1-202ENST00000426447 PRSS51A0A1B0GVH4 220 aa12.62□□□□□ -0.39
PDAP1-202ENST00000426447 AGAP5A6NIR3 686 aa12.62□□□□□ -0.39
PDAP1-202ENST00000426447 A8MVM7 634 aa12.62□□□□□ -0.39
PDAP1-202ENST00000426447 TMEM229AB2RXF0 380 aa12.62□□□□□ -0.39
PDAP1-202ENST00000426447 FAAHO00519 579 aa12.62□□□□□ -0.39
PDAP1-202ENST00000426447 BCL10O95999 233 aa12.62□□□□□ -0.39
PDAP1-202ENST00000426447 HPXP02790 462 aa12.62□□□□□ -0.39
PDAP1-202ENST00000426447 FAM153BP0C7A2 387 aa12.62□□□□□ -0.39
PDAP1-202ENST00000426447 NR4A1P22736 598 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms