RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 GPR45Q9Y5Y3 372 aa13□□□□□ -0.33
ATG4B-209ENST00000425239 A8MVM7 634 aa12.99□□□□□ -0.33
ATG4B-209ENST00000425239 RPL36A-HNRNPH2H7BZ11 118 aa12.99□□□□□ -0.33
ATG4B-209ENST00000425239 FRS3O43559 492 aa12.99□□□□□ -0.33
ATG4B-209ENST00000425239 LILRA1O75019 489 aa12.99□□□□□ -0.33
ATG4B-209ENST00000425239 VAMP5O95183 116 aa12.99□□□□□ -0.33
ATG4B-209ENST00000425239 STAMBPO95630 424 aa12.99□□□□□ -0.33
ATG4B-209ENST00000425239 PGRP06401 933 aa12.99□□□□□ -0.33
ATG4B-209ENST00000425239 TACSTD2P09758 323 aa12.99□□□□□ -0.33
ATG4B-209ENST00000425239 TFPTP0C1Z6 253 aa12.99□□□□□ -0.33
ATG4B-209ENST00000425239 CECR9P0C854 216 aa12.99□□□□□ -0.33
ATG4B-209ENST00000425239 APEHP13798 732 aaKnown RBP12.99□□□□□ -0.33
ATG4B-209ENST00000425239 CXCR1P25024 350 aa12.99□□□□□ -0.33
ATG4B-209ENST00000425239 IL2RGP31785 369 aa12.99□□□□□ -0.33
ATG4B-209ENST00000425239 SLC1A6P48664 564 aa12.99□□□□□ -0.33
ATG4B-209ENST00000425239 TUBA1BP68363 451 aa12.99□□□□□ -0.33
ATG4B-209ENST00000425239 TUBA4AP68366 448 aa12.99□□□□□ -0.33
ATG4B-209ENST00000425239 TXNL4AP83876 142 aaKnown RBP12.99□□□□□ -0.33
ATG4B-209ENST00000425239 TNFAIP8L3Q5GJ75 292 aa12.99□□□□□ -0.33
ATG4B-209ENST00000425239 TMEM225Q6GV28 225 aa12.99□□□□□ -0.33
ATG4B-209ENST00000425239 TUBA1AQ71U36 451 aa12.99□□□□□ -0.33
ATG4B-209ENST00000425239 GPAT4Q86UL3 456 aa12.99□□□□□ -0.33
ATG4B-209ENST00000425239 ZCCHC24Q8N2G6 241 aaKnown RBP12.99□□□□□ -0.33
ATG4B-209ENST00000425239 C1orf159Q96HA4 380 aa12.99□□□□□ -0.33
ATG4B-209ENST00000425239 ZNF317Q96PQ6 595 aaPredicted RBP12.99□□□□□ -0.33
ATG4B-209ENST00000425239 PANX1Q96RD7 426 aa12.99□□□□□ -0.33
ATG4B-209ENST00000425239 PTDSS2Q9BVG9 487 aa12.99□□□□□ -0.33
ATG4B-209ENST00000425239 LINC00470Q9BZP3 86 aa12.99□□□□□ -0.33
ATG4B-209ENST00000425239 MYOZ1Q9NP98 299 aaPredicted RBP12.99□□□□□ -0.33
ATG4B-209ENST00000425239 AIG1Q9NVV5 245 aa12.99□□□□□ -0.33
ATG4B-209ENST00000425239 FKBP7Q9Y680 259 aa12.99□□□□□ -0.33
ATG4B-209ENST00000425239 LRP5LA4QPB2 252 aa12.98□□□□□ -0.33
ATG4B-209ENST00000425239 SDHDO14521 159 aa12.98□□□□□ -0.33
ATG4B-209ENST00000425239 TGFAP01135 160 aa12.98□□□□□ -0.33
ATG4B-209ENST00000425239 CRYAAP02489 173 aa12.98□□□□□ -0.33
ATG4B-209ENST00000425239 CELA3BP08861 270 aa12.98□□□□□ -0.33
ATG4B-209ENST00000425239 PAX7P23759 505 aa12.98□□□□□ -0.33
ATG4B-209ENST00000425239 PPOXP50336 477 aa12.98□□□□□ -0.33
ATG4B-209ENST00000425239 IDH3GP51553 393 aaPredicted RBP12.98□□□□□ -0.33
ATG4B-209ENST00000425239 NME5P56597 212 aa12.98□□□□□ -0.33
ATG4B-209ENST00000425239 SNRPD2P62316 118 aaKnown RBP12.98□□□□□ -0.33
ATG4B-209ENST00000425239 HPCAP84074 193 aa12.98□□□□□ -0.33
ATG4B-209ENST00000425239 C1orf140Q5VVS0 124 aa12.98□□□□□ -0.33
ATG4B-209ENST00000425239 WBP2NLQ6ICG8 309 aa12.98□□□□□ -0.33
ATG4B-209ENST00000425239 ZNF621Q6ZSS3 439 aa12.98□□□□□ -0.33
ATG4B-209ENST00000425239 ZNF440Q8IYI8 595 aa12.98□□□□□ -0.33
ATG4B-209ENST00000425239 KDM8Q8N371 416 aa12.98□□□□□ -0.33
ATG4B-209ENST00000425239 ANKK1Q8NFD2 765 aa12.98□□□□□ -0.33
ATG4B-209ENST00000425239 NUP37Q8NFH4 326 aa12.98□□□□□ -0.33
ATG4B-209ENST00000425239 OR52P1PQ8NH57 321 aa12.98□□□□□ -0.33
ATG4B-209ENST00000425239 PNPT1Q8TCS8 783 aaKnown RBP12.98□□□□□ -0.33
ATG4B-209ENST00000425239 SLC38A5Q8WUX1 472 aa12.98□□□□□ -0.33
ATG4B-209ENST00000425239 C3orf49Q96BT1 292 aa12.98□□□□□ -0.33
ATG4B-209ENST00000425239 ZNF837Q96EG3 531 aaPredicted RBP12.98□□□□□ -0.33
ATG4B-209ENST00000425239 VRK1Q99986 396 aaPredicted RBP12.98□□□□□ -0.33
ATG4B-209ENST00000425239 SSU72Q9NP77 194 aaKnown RBP12.98□□□□□ -0.33
ATG4B-209ENST00000425239 ADPRHL2Q9NX46 363 aa12.98□□□□□ -0.33
ATG4B-209ENST00000425239 B3GAT1Q9P2W7 334 aa12.98□□□□□ -0.33
ATG4B-209ENST00000425239 A0A096LPE4 126 aa12.97□□□□□ -0.33
ATG4B-209ENST00000425239 A0A1W2PPZ6 126 aa12.97□□□□□ -0.33
ATG4B-209ENST00000425239 ZNF587BE7ETH6 402 aa12.97□□□□□ -0.33
ATG4B-209ENST00000425239 SNUPNO95149 360 aaKnown RBP12.97□□□□□ -0.33
ATG4B-209ENST00000425239 C8BP07358 591 aa12.97□□□□□ -0.33
ATG4B-209ENST00000425239 NR2F1P10589 423 aa12.97□□□□□ -0.33
ATG4B-209ENST00000425239 HOXB1P14653 301 aaPredicted RBP12.97□□□□□ -0.33
ATG4B-209ENST00000425239 BGNP21810 368 aa12.97□□□□□ -0.33
ATG4B-209ENST00000425239 THBS4P35443 961 aa12.97□□□□□ -0.33
ATG4B-209ENST00000425239 IFFO1Q0D2I5 559 aa12.97□□□□□ -0.33
ATG4B-209ENST00000425239 RIN1Q13671 783 aa12.97□□□□□ -0.33
ATG4B-209ENST00000425239 GNA13Q14344 377 aa12.97□□□□□ -0.33
ATG4B-209ENST00000425239 CR1LQ2VPA4 569 aa12.97□□□□□ -0.33
ATG4B-209ENST00000425239 RNF220Q5VTB9 566 aa12.97□□□□□ -0.33
ATG4B-209ENST00000425239 NHLRC1Q6VVB1 395 aa12.97□□□□□ -0.33
ATG4B-209ENST00000425239 SPATA19Q7Z5L4 167 aa12.97□□□□□ -0.33
ATG4B-209ENST00000425239 ABHD12BQ7Z5M8 362 aaPredicted RBP12.97□□□□□ -0.33
ATG4B-209ENST00000425239 TRIML2Q8N7C3 387 aa12.97□□□□□ -0.33
ATG4B-209ENST00000425239 ZNF540Q8NDQ6 660 aa12.97□□□□□ -0.33
ATG4B-209ENST00000425239 MFSD8Q8NHS3 518 aa12.97□□□□□ -0.33
ATG4B-209ENST00000425239 ALKBH3Q96Q83 286 aaPredicted RBP12.97□□□□□ -0.33
ATG4B-209ENST00000425239 OR52E6Q96RD3 313 aa12.97□□□□□ -0.33
ATG4B-209ENST00000425239 ZNF442Q9H7R0 627 aa12.97□□□□□ -0.33
ATG4B-209ENST00000425239 SEC14L4Q9UDX3 406 aa12.97□□□□□ -0.33
ATG4B-209ENST00000425239 RASD1Q9Y272 281 aa12.97□□□□□ -0.33
ATG4B-209ENST00000425239 OR6C65A6NJZ3 312 aa12.96□□□□□ -0.33
ATG4B-209ENST00000425239 PNMTP11086 282 aa12.96□□□□□ -0.33
ATG4B-209ENST00000425239 ETFAP13804 333 aa12.96□□□□□ -0.33
ATG4B-209ENST00000425239 CBR1P16152 277 aa12.96□□□□□ -0.33
ATG4B-209ENST00000425239 MSMPQ1L6U9 139 aa12.96□□□□□ -0.33
ATG4B-209ENST00000425239 NIPAL3Q6P499 406 aa12.96□□□□□ -0.33
ATG4B-209ENST00000425239 KLHL24Q6TFL4 600 aa12.96□□□□□ -0.33
ATG4B-209ENST00000425239 SLC46A3Q7Z3Q1 461 aa12.96□□□□□ -0.33
ATG4B-209ENST00000425239 SERPINA11Q86U17 422 aa12.96□□□□□ -0.33
ATG4B-209ENST00000425239 PEX5LQ8IYB4 626 aa12.96□□□□□ -0.33
ATG4B-209ENST00000425239 OR4F15Q8NGB8 312 aa12.96□□□□□ -0.33
ATG4B-209ENST00000425239 STK35Q8TDR2 534 aa12.96□□□□□ -0.33
ATG4B-209ENST00000425239 ZNF75AQ96N20 296 aa12.96□□□□□ -0.33
ATG4B-209ENST00000425239 B3GNT2Q9NY97 397 aa12.96□□□□□ -0.33
ATG4B-209ENST00000425239 ZNF443Q9Y2A4 671 aaPredicted RBP12.96□□□□□ -0.33
ATG4B-209ENST00000425239 IGHV2OR16-5A0A0B4J2B6 119 aa12.95□□□□□ -0.34
ATG4B-209ENST00000425239 TM9SF1O15321 606 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms