RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 TIMP3P35625 211 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 P2RY4P51582 365 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 PMPCAQ10713 525 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 GK3PQ14409 553 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 ATP6AP1Q15904 470 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 OTUD3Q5T2D3 398 aaPredicted RBP15.17■□□□□ 0.02
COL7A1-202ENST00000422991 RIPPLY2Q5TAB7 128 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 TMEM211Q6ICI0 200 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 MAMDC2Q7Z304 686 aaPredicted RBP15.17■□□□□ 0.02
COL7A1-202ENST00000422991 C10orf67Q8IYJ2 551 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 SLC43A2Q8N370 569 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 FAM26EQ8N5C1 309 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 TMEM99Q8N816 258 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 SCAIQ8N9R8 606 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 ADPRHL1Q8NDY3 354 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 ZNF417Q8TAU3 575 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 PIGXQ8TBF5 258 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 ABHD3Q8WU67 409 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 BPIFA2Q96DR5 249 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 ZNF587Q96SQ5 575 aaPredicted RBP15.17■□□□□ 0.02
COL7A1-202ENST00000422991 NAA11Q9BSU3 229 aaPredicted RBP15.17■□□□□ 0.02
COL7A1-202ENST00000422991 CHST11Q9NPF2 352 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 NANSQ9NR45 359 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 MRPL39Q9NYK5 338 aaKnown RBP15.17■□□□□ 0.02
COL7A1-202ENST00000422991 SEC14L4Q9UDX3 406 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 ZNF229Q9UJW7 825 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 TMCC3Q9ULS5 477 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 TMEM5Q9Y2B1 443 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 CORINQ9Y5Q5 1042 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 U3KQV3 271 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 MYO7BQ6PIF6 2116 aa15.16■□□□□ 0.02
COL7A1-202ENST00000422991 RAMP1O60894 148 aa15.16■□□□□ 0.02
COL7A1-202ENST00000422991 LDLRP01130 860 aa15.16■□□□□ 0.02
COL7A1-202ENST00000422991 ASAH2BP0C7U1 165 aa15.16■□□□□ 0.02
COL7A1-202ENST00000422991 MAKP20794 623 aa15.16■□□□□ 0.02
COL7A1-202ENST00000422991 IST1P53990 364 aa15.16■□□□□ 0.02
COL7A1-202ENST00000422991 PPP1R8Q12972 351 aaKnown RBP15.16■□□□□ 0.02
COL7A1-202ENST00000422991 RNPS1Q15287 305 aaKnown RBP15.16■□□□□ 0.02
COL7A1-202ENST00000422991 ZNF771Q7L3S4 317 aaPredicted RBP15.16■□□□□ 0.02
COL7A1-202ENST00000422991 RRM2BQ7LG56 351 aa15.16■□□□□ 0.02
COL7A1-202ENST00000422991 MEX3DQ86XN8 651 aaKnown RBP15.16■□□□□ 0.02
COL7A1-202ENST00000422991 CCDC103Q8IW40 242 aa15.16■□□□□ 0.02
COL7A1-202ENST00000422991 LRRC17Q8N6Y2 441 aa15.16■□□□□ 0.02
COL7A1-202ENST00000422991 NAXEQ8NCW5 288 aa15.16■□□□□ 0.02
COL7A1-202ENST00000422991 LIPHQ8WWY8 451 aa15.16■□□□□ 0.02
COL7A1-202ENST00000422991 ZFP3Q96NJ6 502 aa15.16■□□□□ 0.02
COL7A1-202ENST00000422991 ASPNQ9BXN1 380 aa15.16■□□□□ 0.02
COL7A1-202ENST00000422991 NTN4Q9HB63 628 aa15.16■□□□□ 0.02
COL7A1-202ENST00000422991 C6orf203Q9P0P8 240 aaPredicted RBP15.16■□□□□ 0.02
COL7A1-202ENST00000422991 B3GALT5Q9Y2C3 310 aa15.16■□□□□ 0.02
COL7A1-202ENST00000422991 HECTD1Q9ULT8 2610 aa15.16■□□□□ 0.02
COL7A1-202ENST00000422991 PTPN13Q12923 2485 aa15.16■□□□□ 0.02
COL7A1-202ENST00000422991 ZNF716A6NP11 495 aa15.15■□□□□ 0.02
COL7A1-202ENST00000422991 GNGT2O14610 69 aa15.15■□□□□ 0.02
COL7A1-202ENST00000422991 RCBTB2O95199 551 aa15.15■□□□□ 0.02
COL7A1-202ENST00000422991 IL2RAP01589 272 aa15.15■□□□□ 0.02
COL7A1-202ENST00000422991 FASP25445 335 aa15.15■□□□□ 0.02
COL7A1-202ENST00000422991 GPR4P46093 362 aa15.15■□□□□ 0.02
COL7A1-202ENST00000422991 OMPP47874 163 aa15.15■□□□□ 0.02
COL7A1-202ENST00000422991 ADORA2A-AS1P86434 159 aa15.15■□□□□ 0.02
COL7A1-202ENST00000422991 GUSBP1Q15486 140 aa15.15■□□□□ 0.02
COL7A1-202ENST00000422991 OR2A2Q6IF42 318 aa15.15■□□□□ 0.02
COL7A1-202ENST00000422991 MTFR2Q6P444 385 aa15.15■□□□□ 0.02
COL7A1-202ENST00000422991 TMPRSS11FQ6ZWK6 438 aa15.15■□□□□ 0.02
COL7A1-202ENST00000422991 H1FNTQ75WM6 255 aaPredicted RBP15.15■□□□□ 0.02
COL7A1-202ENST00000422991 TMEM179BQ7Z7N9 219 aa15.15■□□□□ 0.02
COL7A1-202ENST00000422991 LINC00471Q8N535 108 aa15.15■□□□□ 0.02
COL7A1-202ENST00000422991 OR5J2Q8NH18 312 aa15.15■□□□□ 0.02
COL7A1-202ENST00000422991 LRTOMTQ8WZ04 291 aa15.15■□□□□ 0.02
COL7A1-202ENST00000422991 CCDC120Q96HB5 630 aa15.15■□□□□ 0.02
COL7A1-202ENST00000422991 FAM46AQ96IP4 442 aaKnown RBP15.15■□□□□ 0.02
COL7A1-202ENST00000422991 PSD2Q9BQI7 771 aa15.15■□□□□ 0.02
COL7A1-202ENST00000422991 S100A14Q9HCY8 104 aa15.15■□□□□ 0.02
COL7A1-202ENST00000422991 KRCC1Q9NPI7 259 aaPredicted RBP15.15■□□□□ 0.02
COL7A1-202ENST00000422991 KLHL9Q9P2J3 617 aa15.15■□□□□ 0.02
COL7A1-202ENST00000422991 ING1Q9UK53 422 aaPredicted RBP15.15■□□□□ 0.02
COL7A1-202ENST00000422991 SLC5A6Q9Y289 635 aa15.15■□□□□ 0.02
COL7A1-202ENST00000422991 PCNX1Q96RV3 2341 aa15.15■□□□□ 0.02
COL7A1-202ENST00000422991 DIDO1Q9BTC0 2240 aaKnown RBP15.15■□□□□ 0.02
COL7A1-202ENST00000422991 INTS1Q8N201 2190 aaKnown RBP15.14■□□□□ 0.01
COL7A1-202ENST00000422991 IGKV3D-15A0A087WSY6 115 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 A0A0G2JNJ9 132 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 EFCAB9A8MZ26 197 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 KLF4O43474 513 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 OR10H3O60404 316 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 SS18L1O75177 396 aaPredicted RBP15.14■□□□□ 0.01
COL7A1-202ENST00000422991 CCNB2O95067 398 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 FUT1P19526 365 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 DNAJA1P31689 397 aaKnown RBP15.14■□□□□ 0.01
COL7A1-202ENST00000422991 SLC16A1P53985 500 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 PER3P56645 1201 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 SRSF1Q07955 248 aaKnown RBP eCLIP15.14■□□□□ 0.011e-6■■■■□ 19.6
COL7A1-202ENST00000422991 RASGEF1BQ0VAM2 473 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 PMS2P3Q13401 168 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 LAPTM4AQ15012 233 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 PDK3Q15120 406 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 MICAQ29983 383 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 ZNF770Q6IQ21 691 aaPredicted RBP15.14■□□□□ 0.01
COL7A1-202ENST00000422991 HMBOX1Q6NT76 420 aa15.14■□□□□ 0.01
COL7A1-202ENST00000422991 PGBD2Q6P3X8 592 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms