RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 C4orf47A7E2U8 309 aa15.29■□□□□ 0.04
PKP4-204ENST00000421462 RAD1O60671 282 aa15.29■□□□□ 0.04
PKP4-204ENST00000421462 PQBP1O60828 265 aaKnown RBP15.29■□□□□ 0.04
PKP4-204ENST00000421462 RPS27P42677 84 aaKnown RBP15.29■□□□□ 0.04
PKP4-204ENST00000421462 UBE2IP63279 158 aaKnown RBP15.29■□□□□ 0.04
PKP4-204ENST00000421462 DHODHQ02127 395 aa15.29■□□□□ 0.04
PKP4-204ENST00000421462 TRMT12Q53H54 448 aaKnown RBP15.29■□□□□ 0.04
PKP4-204ENST00000421462 IGSF11Q5DX21 431 aa15.29■□□□□ 0.04
PKP4-204ENST00000421462 TMEM64Q6YI46 380 aa15.29■□□□□ 0.04
PKP4-204ENST00000421462 NMNAT3Q96T66 252 aa15.29■□□□□ 0.04
PKP4-204ENST00000421462 MICU1Q9BPX6 476 aa15.29■□□□□ 0.04
PKP4-204ENST00000421462 INPP5EQ9NRR6 644 aa15.29■□□□□ 0.04
PKP4-204ENST00000421462 ABT1Q9ULW3 272 aaKnown RBP15.29■□□□□ 0.04
PKP4-204ENST00000421462 NUP210Q8TEM1 1887 aaPredicted RBP15.29■□□□□ 0.04
PKP4-204ENST00000421462 A0A1W2PQ45 241 aaPredicted RBP15.28■□□□□ 0.04
PKP4-204ENST00000421462 A0A1W2PQY0 241 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 ACOT7O00154 380 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 CTDSPLO15194 276 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 HOXA2O43364 376 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 SLC7A9P82251 487 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 B3GNTL1Q67FW5 361 aaPredicted RBP15.28■□□□□ 0.04
PKP4-204ENST00000421462 LIN54Q6MZP7 749 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 SLC48A1Q6P1K1 146 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 MTSS1LQ765P7 747 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 DNAJA3Q96EY1 480 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 MRGPRX3Q96LB0 322 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 CNN2Q99439 309 aaKnown RBP15.28■□□□□ 0.04
PKP4-204ENST00000421462 PDCD10Q9BUL8 212 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 WDR13Q9H1Z4 485 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 PRDM7Q9NQW5 492 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 MYEF2Q9P2K5 600 aaKnown RBP15.28■□□□□ 0.04
PKP4-204ENST00000421462 FBXL3Q9UKT7 428 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 PLXNA2O75051 1894 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 TMEM272A0A1B0GTI8 110 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 SIGLEC6O43699 453 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 ZFPL1O95159 310 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 PAPLNO95428 1278 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 NANOS3P60323 173 aaKnown RBP15.28■□□□□ 0.04
PKP4-204ENST00000421462 RAB33AQ14088 237 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 UBXN2BQ14CS0 331 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 GUCA2BQ16661 112 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 ELFN2Q5R3F8 820 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 ABHD17CQ6PCB6 329 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 OVCH1Q7RTY7 1134 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 TCEAL8Q8IYN2 117 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 RELTQ969Z4 430 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 UQCC2Q9BRT2 126 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 PTDSS2Q9BVG9 487 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 MRPS30Q9NP92 439 aaKnown RBP15.28■□□□□ 0.04
PKP4-204ENST00000421462 SPHK2Q9NRA0 654 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 ASF1BQ9NVP2 202 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 FBXO4Q9UKT5 387 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 OR1A2Q9Y585 309 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 TGM5O43548 720 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 PVALBP20472 110 aaPredicted RBP15.28■□□□□ 0.04
PKP4-204ENST00000421462 ST8SIA6P61647 398 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 PPP2CBP62714 309 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 PPP2CAP67775 309 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 ACTC1P68032 377 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 ACTA1P68133 377 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 ULBP3Q9BZM4 244 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 TMEM231Q9H6L2 316 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 ESRP2Q9H6T0 727 aaKnown RBP15.28■□□□□ 0.04
PKP4-204ENST00000421462 MED9Q9NWA0 146 aa15.28■□□□□ 0.04
PKP4-204ENST00000421462 ZNF223Q9UK11 482 aaPredicted RBP15.28■□□□□ 0.04
PKP4-204ENST00000421462 OR6C65A6NJZ3 312 aa15.27■□□□□ 0.04
PKP4-204ENST00000421462 OR8G3PP0DMU2 310 aa15.27■□□□□ 0.04
PKP4-204ENST00000421462 CD53P19397 219 aa15.27■□□□□ 0.04
PKP4-204ENST00000421462 MAOBP27338 520 aa15.27■□□□□ 0.04
PKP4-204ENST00000421462 FGL1Q08830 312 aa15.27■□□□□ 0.04
PKP4-204ENST00000421462 RBMS2Q15434 407 aaKnown RBP15.27■□□□□ 0.04
PKP4-204ENST00000421462 MFSD12Q6NUT3 480 aa15.27■□□□□ 0.04
PKP4-204ENST00000421462 ZPLD1Q8TCW7 415 aa15.27■□□□□ 0.04
PKP4-204ENST00000421462 SFXN5Q8TD22 340 aa15.27■□□□□ 0.04
PKP4-204ENST00000421462 NR4A3Q92570 626 aa15.27■□□□□ 0.04
PKP4-204ENST00000421462 TSSK2Q96PF2 358 aa15.27■□□□□ 0.04
PKP4-204ENST00000421462 CMSS1Q9BQ75 279 aaKnown RBP15.27■□□□□ 0.04
PKP4-204ENST00000421462 TMPRSS13Q9BYE2 586 aa15.27■□□□□ 0.04
PKP4-204ENST00000421462 DNTTIP1Q9H147 329 aa15.27■□□□□ 0.04
PKP4-204ENST00000421462 NCDNQ9UBB6 729 aa15.27■□□□□ 0.04
PKP4-204ENST00000421462 TRAV18A0A075B6X5 111 aa15.27■□□□□ 0.03
PKP4-204ENST00000421462 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.27■□□□□ 0.03
PKP4-204ENST00000421462 DNAJB6O75190 326 aa15.27■□□□□ 0.03
PKP4-204ENST00000421462 CLEC3AO75596 197 aa15.27■□□□□ 0.03
PKP4-204ENST00000421462 IFNGP01579 166 aa15.27■□□□□ 0.03
PKP4-204ENST00000421462 RPN2P04844 631 aa15.27■□□□□ 0.03
PKP4-204ENST00000421462 C8AP07357 584 aa15.27■□□□□ 0.03
PKP4-204ENST00000421462 PRDX1Q06830 199 aaKnown RBP15.27■□□□□ 0.03
PKP4-204ENST00000421462 TEAD2Q15562 447 aa15.27■□□□□ 0.03
PKP4-204ENST00000421462 AMZ1Q400G9 498 aa15.27■□□□□ 0.03
PKP4-204ENST00000421462 UNQ6126/PRO20091Q6UXV3 157 aa15.27■□□□□ 0.03
PKP4-204ENST00000421462 BEST3Q8N1M1 668 aa15.27■□□□□ 0.03
PKP4-204ENST00000421462 ZNF511Q8NB15 262 aa15.27■□□□□ 0.03
PKP4-204ENST00000421462 ARRDC3Q96B67 414 aa15.27■□□□□ 0.03
PKP4-204ENST00000421462 GIMAP5Q96F15 307 aa15.27■□□□□ 0.03
PKP4-204ENST00000421462 SDF2Q99470 211 aa15.27■□□□□ 0.03
PKP4-204ENST00000421462 ZMAT3Q9HA38 289 aaKnown RBP15.27■□□□□ 0.03
PKP4-204ENST00000421462 CDV3Q9UKY7 258 aaKnown RBP15.27■□□□□ 0.03
PKP4-204ENST00000421462 PLEKHM1Q9Y4G2 1056 aa15.27■□□□□ 0.03
PKP4-204ENST00000421462 GON4LQ3T8J9 2241 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms