RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 CHN2P52757 468 aa14.63□□□□□ -0.07
UPF3AP3-201ENST00000420996 ABCE1P61221 599 aaKnown RBP14.63□□□□□ -0.07
UPF3AP3-201ENST00000420996 IFFO1Q0D2I5 559 aa14.63□□□□□ -0.07
UPF3AP3-201ENST00000420996 BNIP2Q12982 314 aa14.63□□□□□ -0.07
UPF3AP3-201ENST00000420996 LINGO2Q7L985 606 aa14.63□□□□□ -0.07
UPF3AP3-201ENST00000420996 NUP37Q8NFH4 326 aa14.63□□□□□ -0.07
UPF3AP3-201ENST00000420996 NEU4Q8WWR8 484 aaPredicted RBP14.63□□□□□ -0.07
UPF3AP3-201ENST00000420996 HPS1Q92902 700 aa14.63□□□□□ -0.07
UPF3AP3-201ENST00000420996 ALKBH3Q96Q83 286 aaPredicted RBP14.63□□□□□ -0.07
UPF3AP3-201ENST00000420996 PANX1Q96RD7 426 aa14.63□□□□□ -0.07
UPF3AP3-201ENST00000420996 LINC00470Q9BZP3 86 aa14.63□□□□□ -0.07
UPF3AP3-201ENST00000420996 ZNF442Q9H7R0 627 aa14.63□□□□□ -0.07
UPF3AP3-201ENST00000420996 RLIMQ9NVW2 624 aa14.63□□□□□ -0.07
UPF3AP3-201ENST00000420996 TMEFF2Q9UIK5 374 aaPredicted RBP14.63□□□□□ -0.07
UPF3AP3-201ENST00000420996 RASD1Q9Y272 281 aa14.63□□□□□ -0.07
UPF3AP3-201ENST00000420996 RAP2CQ9Y3L5 183 aa14.63□□□□□ -0.07
UPF3AP3-201ENST00000420996 SVEP1Q4LDE5 3571 aa14.63□□□□□ -0.07
UPF3AP3-201ENST00000420996 A0A096LPE4 126 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 A0A1W2PPZ6 126 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 CDHR4A6H8M9 788 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 hCG_2039718K7EN88 272 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 TCF21O43680 179 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 LILRA1O75019 489 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 SNUPNO95149 360 aaKnown RBP14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 IGKV3-15P01624 115 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 ERCC1P07992 297 aaPredicted RBP14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 GKN3PP0CG01 181 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 RPL14P50914 215 aaKnown RBP14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 SH3BGRP55822 239 aaPredicted RBP14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 TUBA1BP68363 451 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 TUBA4AP68366 448 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 HGFACQ04756 655 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 CHI3L2Q15782 390 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 COX20Q5RI15 118 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 C1orf140Q5VVS0 124 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 PRAMEF8Q5VWM4 474 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 PRAMEF7Q5VXH5 474 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 WBP2NLQ6ICG8 309 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 NIPAL3Q6P499 406 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 ZNF621Q6ZSS3 439 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 TUBA1AQ71U36 451 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 EPHX4Q8IUS5 362 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 CADM2Q8N3J6 435 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 LINC01356Q8N9X3 169 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 PKNOX2Q96KN3 472 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 DOK1Q99704 481 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 C20orf27Q9GZN8 174 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 NELFAQ9H3P2 528 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 SEC61A2Q9H9S3 476 aa14.62□□□□□ -0.07
UPF3AP3-201ENST00000420996 WDR91A4D1P6 747 aa14.61□□□□□ -0.07
UPF3AP3-201ENST00000420996 FRS3O43559 492 aa14.61□□□□□ -0.07
UPF3AP3-201ENST00000420996 UPK3AO75631 287 aa14.61□□□□□ -0.07
UPF3AP3-201ENST00000420996 TFPTP0C1Z6 253 aa14.61□□□□□ -0.07
UPF3AP3-201ENST00000420996 CBR1P16152 277 aa14.61□□□□□ -0.07
UPF3AP3-201ENST00000420996 NPR2P20594 1047 aa14.61□□□□□ -0.07
UPF3AP3-201ENST00000420996 THBS4P35443 961 aa14.61□□□□□ -0.07
UPF3AP3-201ENST00000420996 CDKN2CP42773 168 aa14.61□□□□□ -0.07
UPF3AP3-201ENST00000420996 COPZ1P61923 177 aa14.61□□□□□ -0.07
UPF3AP3-201ENST00000420996 ROR2Q01974 943 aaKnown RBP14.61□□□□□ -0.07
UPF3AP3-201ENST00000420996 LRRC74AQ0VAA2 488 aa14.61□□□□□ -0.07
UPF3AP3-201ENST00000420996 MAPK11Q15759 364 aa14.61□□□□□ -0.07
UPF3AP3-201ENST00000420996 OGFOD2Q6N063 350 aa14.61□□□□□ -0.07
UPF3AP3-201ENST00000420996 UGT2A3Q6UWM9 527 aa14.61□□□□□ -0.07
UPF3AP3-201ENST00000420996 KIRREL3Q8IZU9 778 aa14.61□□□□□ -0.07
UPF3AP3-201ENST00000420996 ZNF786Q8N393 782 aa14.61□□□□□ -0.07
UPF3AP3-201ENST00000420996 ANKK1Q8NFD2 765 aa14.61□□□□□ -0.07
UPF3AP3-201ENST00000420996 OR52P1PQ8NH57 321 aa14.61□□□□□ -0.07
UPF3AP3-201ENST00000420996 C1orf159Q96HA4 380 aa14.61□□□□□ -0.07
UPF3AP3-201ENST00000420996 TEX37Q96LM6 180 aa14.61□□□□□ -0.07
UPF3AP3-201ENST00000420996 ANKRD27Q96NW4 1050 aa14.61□□□□□ -0.07
UPF3AP3-201ENST00000420996 OR52E6Q96RD3 313 aa14.61□□□□□ -0.07
UPF3AP3-201ENST00000420996 PCDHB14Q9Y5E9 798 aa14.61□□□□□ -0.07
UPF3AP3-201ENST00000420996 A0A096LPI6 279 aa14.6□□□□□ -0.07
UPF3AP3-201ENST00000420996 TMEM129A0AVI4 362 aa14.6□□□□□ -0.07
UPF3AP3-201ENST00000420996 TMEM229AB2RXF0 380 aa14.6□□□□□ -0.07
UPF3AP3-201ENST00000420996 RPL36A-HNRNPH2H7BZ11 118 aa14.6□□□□□ -0.07
UPF3AP3-201ENST00000420996 BIRC5O15392 142 aa14.6□□□□□ -0.07
UPF3AP3-201ENST00000420996 NPIPB7O75200 414 aa14.6□□□□□ -0.07
UPF3AP3-201ENST00000420996 APEX1P27695 318 aaKnown RBP14.6□□□□□ -0.07
UPF3AP3-201ENST00000420996 IL2RGP31785 369 aa14.6□□□□□ -0.07
UPF3AP3-201ENST00000420996 SRP14P37108 136 aaKnown RBP14.6□□□□□ -0.07
UPF3AP3-201ENST00000420996 UFM1P61960 85 aa14.6□□□□□ -0.07
UPF3AP3-201ENST00000420996 LIN52Q52LA3 116 aa14.6□□□□□ -0.07
UPF3AP3-201ENST00000420996 ZNF836Q6ZNA1 936 aa14.6□□□□□ -0.07
UPF3AP3-201ENST00000420996 VRK2Q86Y07 508 aa14.6□□□□□ -0.07
UPF3AP3-201ENST00000420996 ZCCHC24Q8N2G6 241 aaKnown RBP14.6□□□□□ -0.07
UPF3AP3-201ENST00000420996 SVOPLQ8N434 492 aa14.6□□□□□ -0.07
UPF3AP3-201ENST00000420996 PNPT1Q8TCS8 783 aaKnown RBP14.6□□□□□ -0.07
UPF3AP3-201ENST00000420996 STK35Q8TDR2 534 aa14.6□□□□□ -0.07
UPF3AP3-201ENST00000420996 SORT1Q99523 831 aa14.6□□□□□ -0.07
UPF3AP3-201ENST00000420996 NUF2Q9BZD4 464 aa14.6□□□□□ -0.07
UPF3AP3-201ENST00000420996 CALML5Q9NZT1 146 aa14.6□□□□□ -0.07
UPF3AP3-201ENST00000420996 HAO1Q9UJM8 370 aa14.6□□□□□ -0.07
UPF3AP3-201ENST00000420996 DSPPQ9NZW4 1301 aa14.6□□□□□ -0.07
UPF3AP3-201ENST00000420996 ZNF432O94892 652 aa14.59□□□□□ -0.07
UPF3AP3-201ENST00000420996 KRT75O95678 551 aa14.59□□□□□ -0.07
UPF3AP3-201ENST00000420996 GSNP06396 782 aa14.59□□□□□ -0.07
UPF3AP3-201ENST00000420996 CELA3BP08861 270 aa14.59□□□□□ -0.07
UPF3AP3-201ENST00000420996 ITGA2P17301 1181 aa14.59□□□□□ -0.07
UPF3AP3-201ENST00000420996 SLC1A6P48664 564 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms