RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 MLLT10P55197 1068 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 CDH15P55291 814 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 RPS7P62081 194 aaKnown RBP5.39□□□□□ -1.55
HMGB3-202ENST00000419110 SLC35A2P78381 396 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 LGALS3BPQ08380 585 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 TUBA3CQ13748 450 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 TBCEQ15813 527 aaPredicted RBP5.39□□□□□ -1.55
HMGB3-202ENST00000419110 NEDD8Q15843 81 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 OCLNQ16625 522 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 GXYLT1Q4G148 440 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 ATP1A1-AS1Q5TC04 95 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 NXNL2Q5VZ03 156 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 FAM205BPQ63HN1 556 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 SLC6A19Q695T7 634 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 TIGD3Q6B0B8 471 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 GPR139Q6DWJ6 353 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 NIPAL3Q6P499 406 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 TUBA3EQ6PEY2 450 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 ARSKQ6UWY0 536 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 DPY19L2P2Q6ZN68 376 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 CCDC81Q6ZN84 652 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 LINC00696Q6ZRV3 163 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 PRSS48Q7RTY5 328 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 GPR141Q7Z602 305 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 ADCK1Q86TW2 530 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 GTPBP8Q8N3Z3 284 aaPredicted RBP5.39□□□□□ -1.55
HMGB3-202ENST00000419110 AMER2Q8N7J2 671 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 KDF1Q8NAX2 398 aaPredicted RBP5.39□□□□□ -1.55
HMGB3-202ENST00000419110 TMEM178AQ8NBL3 297 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 FAM98AQ8NCA5 519 aaKnown RBP5.39□□□□□ -1.55
HMGB3-202ENST00000419110 ADPRHL1Q8NDY3 354 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 OR5J2Q8NH18 312 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 RHOXF1Q8NHV9 184 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 LIPHQ8WWY8 451 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 SMPDL3BQ92485 455 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 PSMF1Q92530 271 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 TM9SF4Q92544 642 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 OTULINQ96BN8 352 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 KTI12Q96EK9 354 aaPredicted RBP5.39□□□□□ -1.55
HMGB3-202ENST00000419110 LRR1Q96L50 414 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 SFXN2Q96NB2 322 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 MOGAT1Q96PD6 335 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 ERMAPQ96PL5 475 aaPredicted RBP5.39□□□□□ -1.55
HMGB3-202ENST00000419110 FAM173AQ9BQD7 235 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 PIGQQ9BRB3 760 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 KATNB1Q9BVA0 655 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 OR2B2Q9GZK3 357 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 OR11A1Q9GZK7 315 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 FAM192AQ9GZU8 254 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 UBQLN3Q9H347 655 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 ZNF703Q9H7S9 590 aaPredicted RBP5.39□□□□□ -1.55
HMGB3-202ENST00000419110 CHST11Q9NPF2 352 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 KLHL1Q9NR64 748 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 PLCXD1Q9NUJ7 323 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 MRPL39Q9NYK5 338 aaKnown RBP5.39□□□□□ -1.55
HMGB3-202ENST00000419110 ZNF226Q9NYT6 803 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 IL20RAQ9UHF4 553 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 FBXL2Q9UKC9 423 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 HDGFL3Q9Y3E1 203 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 HRH3Q9Y5N1 445 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 DNAJC13O75165 2243 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 APC2O95996 2303 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 CACNA1GO43497 2377 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 TEX13CA0A0J9YWL9 993 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 A0A1W2PNV4 684 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 A0A1W2PRG6 482 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 ZC3H12DA2A288 527 aaKnown RBP5.38□□□□□ -1.55
HMGB3-202ENST00000419110 TRABD2BA6NFA1 517 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 CCDC160A6NGH7 325 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 A6NIZ1 184 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 NPIPB13A6NJU9 1138 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 TRIM64CA6NLI5 447 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 CLCA1A8K7I4 914 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 NPIPB4C9JG80 1138 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 LRRN3E7EW58 273 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 NPIPA5E9PKD4 350 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 BLOC1S5-TXNDC5H3BN57 136 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 M0R082 166 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 ARPC3O15145 178 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 KLK10O43240 276 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 RNF13O43567 381 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 DNPH1O43598 174 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 TLX2O43763 284 aaPredicted RBP5.38□□□□□ -1.55
HMGB3-202ENST00000419110 AKAP8O43823 692 aaKnown RBP5.38□□□□□ -1.55
HMGB3-202ENST00000419110 IDH3BO43837 385 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 NME2P1O60361 137 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 NPIPB7O75200 414 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 ENTPD6O75354 484 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 TRIM3O75382 744 aaPredicted RBP5.38□□□□□ -1.55
HMGB3-202ENST00000419110 CBR3O75828 277 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 RAB36O95755 333 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 WDPCPO95876 746 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 RENP00797 406 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 IGHMP01871 453 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 CDK1P06493 297 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 ADORA3P0DMS8 318 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 PEPDP12955 493 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 NR2C1P13056 603 aa5.38□□□□□ -1.55
HMGB3-202ENST00000419110 POU3F2P20265 443 aaPredicted RBP5.38□□□□□ -1.55
HMGB3-202ENST00000419110 NME2P22392 152 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms