RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 RS1O15537 224 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 CACNG3O60359 315 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 KIAA0754O94854 1291 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 WISP3O95389 354 aaPredicted RBP2.57□□□□□ -2
HMGB1P49-201ENST00000418882 CAPN1P07384 714 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 POLR2EP19388 210 aaKnown RBP2.57□□□□□ -2
HMGB1P49-201ENST00000418882 NPR2P20594 1047 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 GALP22466 123 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 PSMA2P25787 234 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 FGF9P31371 208 aaPredicted RBP2.57□□□□□ -2
HMGB1P49-201ENST00000418882 CASQ1P31415 396 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 PRRX1P54821 245 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 PRMT2P55345 433 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 PSG5Q15238 335 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 TRIM16LQ309B1 348 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 TP53I3Q53FA7 332 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 TAS2R42Q7RTR8 314 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 RDH10Q8IZV5 341 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 BBS5Q8N3I7 341 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 OR51G1Q8NGK1 321 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 ST8SIA1Q92185 356 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 PIGCQ92535 297 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 ARPC1AQ92747 370 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 NPY6RQ99463 290 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 CCT7Q99832 543 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 BCL7BQ9BQE9 202 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 NRIP2Q9BQI9 281 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 SLC35A5Q9BS91 424 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 NXF5Q9H1B4 397 aaKnown RBP2.57□□□□□ -2
HMGB1P49-201ENST00000418882 C20orf85Q9H1P6 137 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 RBAKQ9NYW8 714 aaPredicted RBP2.57□□□□□ -2
HMGB1P49-201ENST00000418882 MRPS7Q9Y2R9 242 aaKnown RBP2.57□□□□□ -2
HMGB1P49-201ENST00000418882 IGHV1OR21-1A0A087WYE8 117 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 A0A096LNJ9 63 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 SPRR5A0A1B0GTR4 108 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 NKX2-6A6NCS4 301 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 OR2AG2A6NM03 316 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 FOXE1O00358 373 aaPredicted RBP2.56□□□□□ -2
HMGB1P49-201ENST00000418882 DCTN6O00399 190 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 TNNI3P19429 210 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 MAGP20916 626 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 CXCR2P25025 360 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 HTR2AP28223 471 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 RFC4P35249 363 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 SH3BGRP55822 239 aaPredicted RBP2.56□□□□□ -2
HMGB1P49-201ENST00000418882 SELENOTP62341 195 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 SELPLGQ14242 412 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 ARL6IP1Q15041 203 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 NRF1Q16656 503 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 CCDC57Q2TAC2 916 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 FILIP1LQ4L180 1135 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 BCL7AQ4VC05 210 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 PHYHD1Q5SRE7 291 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 TTC23Q5W5X9 447 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 METAP1DQ6UB28 335 aaPredicted RBP2.56□□□□□ -2
HMGB1P49-201ENST00000418882 CDR2LQ86X02 465 aaPredicted RBP2.56□□□□□ -2
HMGB1P49-201ENST00000418882 TTC5Q8N0Z6 440 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 OR2L13Q8N349 312 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 ATP6V0D2Q8N8Y2 350 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 BHLHE23Q8NDY6 225 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 OR51S1Q8NGJ8 323 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 VCXQ9H320 206 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 EML4Q9HC35 981 aaKnown RBP2.56□□□□□ -2
HMGB1P49-201ENST00000418882 CYTL1Q9NRR1 136 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 RASD1Q9Y272 281 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 AK6Q9Y3D8 172 aaKnown RBP2.56□□□□□ -2
HMGB1P49-201ENST00000418882 V9GY05 133 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 CLSPNQ9HAW4 1339 aa2.56□□□□□ -2
HMGB1P49-201ENST00000418882 MBLAC1A4D2B0 266 aaPredicted RBP2.55□□□□□ -2
HMGB1P49-201ENST00000418882 ARHGEF35A5YM69 484 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 NCF1BA6NI72 391 aaPredicted RBP2.55□□□□□ -2
HMGB1P49-201ENST00000418882 LRRIQ4A6NIV6 560 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 OR52A4PA6NMU1 304 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 NCF1CA8MVU1 366 aaPredicted RBP2.55□□□□□ -2
HMGB1P49-201ENST00000418882 E7ESA3 106 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 H0YIV9 168 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 DLGAP1O14490 977 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 PRRG1O14668 218 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 RHOBTB1O94844 696 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 MFN2O95140 757 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 STAMBPO95630 424 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 H2BFMP0C1H6 154 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 ANXA8P13928 327 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 DAP3P51398 398 aaKnown RBP2.55□□□□□ -2
HMGB1P49-201ENST00000418882 HNRNPA3P51991 378 aaKnown RBP2.55□□□□□ -2
HMGB1P49-201ENST00000418882 AP3M2P53677 418 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 TAS2R19P59542 299 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 PFN3P60673 137 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 CBX1P83916 185 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 BST1Q10588 318 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 SRSF5Q13243 272 aaKnown RBP2.55□□□□□ -2
HMGB1P49-201ENST00000418882 GRB7Q14451 532 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 PPP1R7Q15435 360 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 TSPO2Q5TGU0 170 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 OR2G6Q5TZ20 316 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 ANXA8L1Q5VT79 327 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 C11orf71Q6IPW1 123 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 C6orf89Q6UWU4 347 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 MAP3K15Q6ZN16 1313 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 RUFY3Q7L099 469 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms