RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 KRT33AO76009 404 aa15.41■□□□□ 0.06
PDLIM2-208ENST00000416159 ARAFP10398 606 aa15.41■□□□□ 0.06
PDLIM2-208ENST00000416159 PTNP21246 168 aa15.41■□□□□ 0.06
PDLIM2-208ENST00000416159 PAX7P23759 505 aa15.41■□□□□ 0.06
PDLIM2-208ENST00000416159 PRKAR1BP31321 381 aa15.41■□□□□ 0.06
PDLIM2-208ENST00000416159 SPOCK1Q08629 439 aa15.41■□□□□ 0.06
PDLIM2-208ENST00000416159 GCNT6Q5T4J0 391 aa15.41■□□□□ 0.06
PDLIM2-208ENST00000416159 ZNF544Q6NX49 715 aa15.41■□□□□ 0.06
PDLIM2-208ENST00000416159 DNM1P46Q6ZS02 220 aa15.41■□□□□ 0.06
PDLIM2-208ENST00000416159 CREB3L2Q70SY1 520 aa15.41■□□□□ 0.06
PDLIM2-208ENST00000416159 KRT73Q86Y46 540 aa15.41■□□□□ 0.06
PDLIM2-208ENST00000416159 MUC15Q8N387 334 aa15.41■□□□□ 0.06
PDLIM2-208ENST00000416159 SPATA5L1Q9BVQ7 753 aa15.41■□□□□ 0.06
PDLIM2-208ENST00000416159 C12orf10Q9HB07 376 aa15.41■□□□□ 0.06
PDLIM2-208ENST00000416159 OBP2BQ9NPH6 170 aa15.41■□□□□ 0.06
PDLIM2-208ENST00000416159 CCDC167Q9P0B6 97 aa15.41■□□□□ 0.06
PDLIM2-208ENST00000416159 SLAMF8Q9P0V8 285 aa15.41■□□□□ 0.06
PDLIM2-208ENST00000416159 GDF2Q9UK05 429 aaPredicted RBP15.41■□□□□ 0.06
PDLIM2-208ENST00000416159 ATP23Q9Y6H3 246 aa15.41■□□□□ 0.06
PDLIM2-208ENST00000416159 ABCA1O95477 2261 aa15.4■□□□□ 0.06
PDLIM2-208ENST00000416159 ELOA3DA6NLF2 546 aaPredicted RBP15.4■□□□□ 0.06
PDLIM2-208ENST00000416159 ATP4BP51164 291 aa15.4■□□□□ 0.06
PDLIM2-208ENST00000416159 AQP5P55064 265 aa15.4■□□□□ 0.06
PDLIM2-208ENST00000416159 HOXC5Q00444 222 aa15.4■□□□□ 0.06
PDLIM2-208ENST00000416159 CDK6Q00534 326 aa15.4■□□□□ 0.06
PDLIM2-208ENST00000416159 ELOA3BQ3SY89 546 aa15.4■□□□□ 0.06
PDLIM2-208ENST00000416159 PAGE3Q5JUK9 113 aa15.4■□□□□ 0.06
PDLIM2-208ENST00000416159 C11orf71Q6IPW1 123 aa15.4■□□□□ 0.06
PDLIM2-208ENST00000416159 REEP3Q6NUK4 255 aa15.4■□□□□ 0.06
PDLIM2-208ENST00000416159 C5orf46Q6UWT4 87 aa15.4■□□□□ 0.06
PDLIM2-208ENST00000416159 C6orf89Q6UWU4 347 aa15.4■□□□□ 0.06
PDLIM2-208ENST00000416159 MSRB3Q8IXL7 192 aa15.4■□□□□ 0.06
PDLIM2-208ENST00000416159 LSMEM1Q8N8F7 131 aa15.4■□□□□ 0.06
PDLIM2-208ENST00000416159 ELOA3Q8NG57 546 aa15.4■□□□□ 0.06
PDLIM2-208ENST00000416159 NFKBIDQ8NI38 313 aa15.4■□□□□ 0.06
PDLIM2-208ENST00000416159 DYDC1Q8WWB3 177 aa15.4■□□□□ 0.06
PDLIM2-208ENST00000416159 SLC25A36Q96CQ1 311 aa15.4■□□□□ 0.06
PDLIM2-208ENST00000416159 CACNG6Q9BXT2 260 aa15.4■□□□□ 0.06
PDLIM2-208ENST00000416159 SLC52A3Q9NQ40 469 aa15.4■□□□□ 0.06
PDLIM2-208ENST00000416159 CORO2BQ9UQ03 480 aa15.4■□□□□ 0.06
PDLIM2-208ENST00000416159 EVPLLA8MZ36 301 aa15.39■□□□□ 0.05
PDLIM2-208ENST00000416159 FTCDNL1E5RQL4 147 aa15.39■□□□□ 0.05
PDLIM2-208ENST00000416159 ZNF587BE7ETH6 402 aa15.39■□□□□ 0.05
PDLIM2-208ENST00000416159 OR2T1O43869 369 aa15.39■□□□□ 0.05
PDLIM2-208ENST00000416159 SSX4O60224 188 aa15.39■□□□□ 0.05
PDLIM2-208ENST00000416159 PNMTP11086 282 aa15.39■□□□□ 0.05
PDLIM2-208ENST00000416159 CDH2P19022 906 aaPredicted RBP15.39■□□□□ 0.05
PDLIM2-208ENST00000416159 GTF2E2P29084 291 aaKnown RBP15.39■□□□□ 0.05
PDLIM2-208ENST00000416159 RPS5P46782 204 aaKnown RBP15.39■□□□□ 0.05
PDLIM2-208ENST00000416159 SELENOPP49908 381 aa15.39■□□□□ 0.05
PDLIM2-208ENST00000416159 SLC25A3Q00325 362 aa15.39■□□□□ 0.05
PDLIM2-208ENST00000416159 EGR4Q05215 589 aa15.39■□□□□ 0.05
PDLIM2-208ENST00000416159 AGKQ53H12 422 aa15.39■□□□□ 0.05
PDLIM2-208ENST00000416159 NIPAL3Q6P499 406 aa15.39■□□□□ 0.05
PDLIM2-208ENST00000416159 DHRS4L2Q6PKH6 230 aa15.39■□□□□ 0.05
PDLIM2-208ENST00000416159 B3GLCTQ6Y288 498 aa15.39■□□□□ 0.05
PDLIM2-208ENST00000416159 EPHX4Q8IUS5 362 aa15.39■□□□□ 0.05
PDLIM2-208ENST00000416159 MAPK1IP1LQ8NDC0 245 aa15.39■□□□□ 0.05
PDLIM2-208ENST00000416159 DNAJA4Q8WW22 397 aaPredicted RBP15.39■□□□□ 0.05
PDLIM2-208ENST00000416159 RHNO1Q9BSD3 238 aa15.39■□□□□ 0.05
PDLIM2-208ENST00000416159 PTDSS2Q9BVG9 487 aa15.39■□□□□ 0.05
PDLIM2-208ENST00000416159 LINC00470Q9BZP3 86 aa15.39■□□□□ 0.05
PDLIM2-208ENST00000416159 VAPAQ9P0L0 249 aa15.39■□□□□ 0.05
PDLIM2-208ENST00000416159 JMJD1CQ15652 2540 aa15.38■□□□□ 0.05
PDLIM2-208ENST00000416159 BMP4P12644 408 aa15.38■□□□□ 0.05
PDLIM2-208ENST00000416159 ZNF43P17038 809 aa15.38■□□□□ 0.05
PDLIM2-208ENST00000416159 GPX2P18283 190 aa15.38■□□□□ 0.05
PDLIM2-208ENST00000416159 APOBEC3AP31941 199 aaPredicted RBP15.38■□□□□ 0.05
PDLIM2-208ENST00000416159 NUDT6P53370 316 aa15.38■□□□□ 0.05
PDLIM2-208ENST00000416159 DSCR9P59020 149 aa15.38■□□□□ 0.05
PDLIM2-208ENST00000416159 KRTAP1-1Q07627 177 aa15.38■□□□□ 0.05
PDLIM2-208ENST00000416159 SQLEQ14534 574 aa15.38■□□□□ 0.05
PDLIM2-208ENST00000416159 RAB35Q15286 201 aa15.38■□□□□ 0.05
PDLIM2-208ENST00000416159 TBRG1Q3YBR2 411 aa15.38■□□□□ 0.05
PDLIM2-208ENST00000416159 HIKESHIQ53FT3 197 aa15.38■□□□□ 0.05
PDLIM2-208ENST00000416159 TTMPQ5BVD1 217 aa15.38■□□□□ 0.05
PDLIM2-208ENST00000416159 NET1Q7Z628 596 aaPredicted RBP15.38■□□□□ 0.05
PDLIM2-208ENST00000416159 BHLHE22Q8NFJ8 381 aaPredicted RBP15.38■□□□□ 0.05
PDLIM2-208ENST00000416159 OR1K1Q8NGR3 316 aa15.38■□□□□ 0.05
PDLIM2-208ENST00000416159 SLC38A4Q969I6 547 aa15.38■□□□□ 0.05
PDLIM2-208ENST00000416159 OXGR1Q96P68 337 aa15.38■□□□□ 0.05
PDLIM2-208ENST00000416159 ZNF607Q96SK3 696 aa15.38■□□□□ 0.05
PDLIM2-208ENST00000416159 RABEP2Q9H5N1 569 aa15.38■□□□□ 0.05
PDLIM2-208ENST00000416159 TMEM38AQ9H6F2 299 aa15.38■□□□□ 0.05
PDLIM2-208ENST00000416159 CR1P17927 2039 aa15.38■□□□□ 0.05
PDLIM2-208ENST00000416159 TRBV5-3A0A0A0MS03 114 aa15.37■□□□□ 0.05
PDLIM2-208ENST00000416159 A0A1B0GWA3 101 aa15.37■□□□□ 0.05
PDLIM2-208ENST00000416159 PRORSD1PA6NEY8 169 aa15.37■□□□□ 0.05
PDLIM2-208ENST00000416159 AIM2O14862 343 aa15.37■□□□□ 0.05
PDLIM2-208ENST00000416159 FZD7O75084 574 aa15.37■□□□□ 0.05
PDLIM2-208ENST00000416159 LGI1O95970 557 aa15.37■□□□□ 0.05
PDLIM2-208ENST00000416159 TP53P04637 393 aaPredicted RBP15.37■□□□□ 0.05
PDLIM2-208ENST00000416159 HOXB1P14653 301 aaPredicted RBP15.37■□□□□ 0.05
PDLIM2-208ENST00000416159 SLC6A2P23975 617 aa15.37■□□□□ 0.05
PDLIM2-208ENST00000416159 CLDN17P56750 224 aa15.37■□□□□ 0.05
PDLIM2-208ENST00000416159 CHRNB3Q05901 458 aa15.37■□□□□ 0.05
PDLIM2-208ENST00000416159 DMTNQ08495 405 aa15.37■□□□□ 0.05
PDLIM2-208ENST00000416159 SCARB2Q14108 478 aa15.37■□□□□ 0.05
PDLIM2-208ENST00000416159 FAM69AQ5T7M9 428 aa15.37■□□□□ 0.05
PDLIM2-208ENST00000416159 PRIMA1Q86XR5 153 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms