RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 HCRTR2O43614 444 aa13.18□□□□□ -0.3
SGCE-202ENST00000415788 YES1P07947 543 aa13.18□□□□□ -0.3
SGCE-202ENST00000415788 SUMO3P55854 103 aaPredicted RBP13.18□□□□□ -0.3
SGCE-202ENST00000415788 EEF1A1P68104 462 aaKnown RBP13.18□□□□□ -0.3
SGCE-202ENST00000415788 HYAL4Q2M3T9 481 aa13.18□□□□□ -0.3
SGCE-202ENST00000415788 MRPL2Q5T653 305 aaKnown RBP13.18□□□□□ -0.3
SGCE-202ENST00000415788 ZNF836Q6ZNA1 936 aa13.18□□□□□ -0.3
SGCE-202ENST00000415788 GDPGP1Q6ZNW5 385 aa13.18□□□□□ -0.3
SGCE-202ENST00000415788 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.18□□□□□ -0.3
SGCE-202ENST00000415788 GRAMD2AQ8IUY3 354 aa13.18□□□□□ -0.3
SGCE-202ENST00000415788 ZNF440Q8IYI8 595 aa13.18□□□□□ -0.3
SGCE-202ENST00000415788 GATSQ8NAP1 163 aa13.18□□□□□ -0.3
SGCE-202ENST00000415788 FAM71CQ8NEG0 241 aa13.18□□□□□ -0.3
SGCE-202ENST00000415788 Q96MT0 163 aa13.18□□□□□ -0.3
SGCE-202ENST00000415788 CDCA4Q9BXL8 241 aa13.18□□□□□ -0.3
SGCE-202ENST00000415788 PTGES2Q9H7Z7 377 aa13.18□□□□□ -0.3
SGCE-202ENST00000415788 KLHL28Q9NXS3 571 aa13.18□□□□□ -0.3
SGCE-202ENST00000415788 SLC13A4Q9UKG4 626 aa13.18□□□□□ -0.3
SGCE-202ENST00000415788 TBC1D24Q9ULP9 559 aa13.18□□□□□ -0.3
SGCE-202ENST00000415788 C2orf72A6NCS6 295 aa13.17□□□□□ -0.3
SGCE-202ENST00000415788 LRRC3CA6NJW4 275 aa13.17□□□□□ -0.3
SGCE-202ENST00000415788 CCRL2O00421 344 aa13.17□□□□□ -0.3
SGCE-202ENST00000415788 SYT5O00445 386 aa13.17□□□□□ -0.3
SGCE-202ENST00000415788 SUV39H1O43463 412 aa13.17□□□□□ -0.3
SGCE-202ENST00000415788 MPZL2O60487 215 aa13.17□□□□□ -0.3
SGCE-202ENST00000415788 CBR3O75828 277 aa13.17□□□□□ -0.3
SGCE-202ENST00000415788 STSP08842 583 aa13.17□□□□□ -0.3
SGCE-202ENST00000415788 GABRB1P18505 474 aa13.17□□□□□ -0.3
SGCE-202ENST00000415788 PLGLB1Q02325 96 aa13.17□□□□□ -0.3
SGCE-202ENST00000415788 HMGN2P46Q86SG4 172 aa13.17□□□□□ -0.3
SGCE-202ENST00000415788 FADS6Q8N9I5 356 aa13.17□□□□□ -0.3
SGCE-202ENST00000415788 WDSUB1Q8N9V3 476 aa13.17□□□□□ -0.3
SGCE-202ENST00000415788 OR4K17Q8NGC6 315 aa13.17□□□□□ -0.3
SGCE-202ENST00000415788 TTTY12Q9BZ98 90 aa13.17□□□□□ -0.3
SGCE-202ENST00000415788 LAT2Q9GZY6 243 aa13.17□□□□□ -0.3
SGCE-202ENST00000415788 SMURF1Q9HCE7 757 aa13.17□□□□□ -0.3
SGCE-202ENST00000415788 USP24Q9UPU5 2620 aa13.17□□□□□ -0.3
SGCE-202ENST00000415788 PINLYPA6NC86 204 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 GNB5O14775 395 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 GLSO94925 669 aaPredicted RBP13.16□□□□□ -0.3
SGCE-202ENST00000415788 PTHP01270 115 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 CRYABP02511 175 aaKnown RBP13.16□□□□□ -0.3
SGCE-202ENST00000415788 OPN1SWP03999 348 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 RRM2P31350 389 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 KCNJ5P48544 419 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 P2RX1P51575 399 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 CRYBA2P53672 197 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 ZNF117Q03924 483 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 ST3GAL4Q11206 333 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 SKP2Q13309 424 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 GANABQ14697 944 aaKnown RBP13.16□□□□□ -0.3
SGCE-202ENST00000415788 ARMC4Q5T2S8 1044 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 OR8H2Q8N162 312 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 OR2M3Q8NG83 312 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 WDFY2Q96P53 400 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 DNAJB12Q9NXW2 375 aaKnown RBP13.16□□□□□ -0.3
SGCE-202ENST00000415788 CARD8Q9Y2G2 431 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 TNRC6AQ8NDV7 1962 aaKnown RBP13.16□□□□□ -0.3
SGCE-202ENST00000415788 CNTRLQ7Z7A1 2325 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 SLC35F4A4IF30 521 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 TNFRSF11BO00300 401 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 PRKCAP17252 672 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 TNFSF8P32971 234 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 SLC6A8P48029 635 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 SELENOWP63302 87 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 OR5M10Q6IEU7 315 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 ZNF550Q7Z398 422 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 NRARPQ7Z6K4 114 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 Q8NA96 180 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 OR10G2Q8NGC3 310 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 OR5W2Q8NH69 310 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 ANGPTL6Q8NI99 470 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 ARSGQ96EG1 525 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 GNRHR2Q96P88 292 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 TMEM246Q9BRR3 403 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 ZNF703Q9H7S9 590 aaPredicted RBP13.16□□□□□ -0.3
SGCE-202ENST00000415788 ZNF226Q9NYT6 803 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 ICAM5Q9UMF0 924 aa13.16□□□□□ -0.3
SGCE-202ENST00000415788 CACNA1BQ00975 2339 aa13.15□□□□□ -0.3
SGCE-202ENST00000415788 ANKUB1A6NFN9 424 aa13.15□□□□□ -0.3
SGCE-202ENST00000415788 CYP7B1O75881 506 aa13.15□□□□□ -0.3
SGCE-202ENST00000415788 LGI1O95970 557 aa13.15□□□□□ -0.3
SGCE-202ENST00000415788 C19orf57Q0VDD7 668 aa13.15□□□□□ -0.3
SGCE-202ENST00000415788 CBFBQ13951 182 aa13.15□□□□□ -0.3
SGCE-202ENST00000415788 INPP5JQ15735 1006 aaPredicted RBP13.15□□□□□ -0.3
SGCE-202ENST00000415788 DUSP7Q16829 419 aa13.15□□□□□ -0.3
SGCE-202ENST00000415788 CBLN3Q6UW01 205 aa13.15□□□□□ -0.3
SGCE-202ENST00000415788 FAM180AQ6UWF9 173 aa13.15□□□□□ -0.3
SGCE-202ENST00000415788 FAM109AQ8N4B1 249 aa13.15□□□□□ -0.3
SGCE-202ENST00000415788 CNOT9Q92600 299 aaKnown RBP13.15□□□□□ -0.3
SGCE-202ENST00000415788 MED30Q96HR3 178 aa13.15□□□□□ -0.3
SGCE-202ENST00000415788 TPD52L3Q96J77 140 aa13.15□□□□□ -0.3
SGCE-202ENST00000415788 FEVQ99581 238 aa13.15□□□□□ -0.3
SGCE-202ENST00000415788 MGLLQ99685 303 aa13.15□□□□□ -0.3
SGCE-202ENST00000415788 UBQLN3Q9H347 655 aa13.15□□□□□ -0.3
SGCE-202ENST00000415788 RNF167Q9H6Y7 350 aa13.15□□□□□ -0.3
SGCE-202ENST00000415788 RLIMQ9NVW2 624 aa13.15□□□□□ -0.3
SGCE-202ENST00000415788 IMPAD1Q9NX62 359 aa13.15□□□□□ -0.3
SGCE-202ENST00000415788 MED11Q9P086 117 aa13.15□□□□□ -0.3
SGCE-202ENST00000415788 FBXL2Q9UKC9 423 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms