RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 LINC00470Q9BZP3 86 aa13.33□□□□□ -0.28
DDX56-202ENST00000415758 DPY30Q9C005 99 aa13.33□□□□□ -0.28
DDX56-202ENST00000415758 TMEM229AB2RXF0 380 aa13.32□□□□□ -0.28
DDX56-202ENST00000415758 RPL36A-HNRNPH2H7BZ11 118 aa13.32□□□□□ -0.28
DDX56-202ENST00000415758 UPK3AO75631 287 aa13.32□□□□□ -0.28
DDX56-202ENST00000415758 VENTXO95231 258 aa13.32□□□□□ -0.28
DDX56-202ENST00000415758 CHRM4P08173 479 aa13.32□□□□□ -0.28
DDX56-202ENST00000415758 CBR1P16152 277 aa13.32□□□□□ -0.28
DDX56-202ENST00000415758 IL7RP16871 459 aa13.32□□□□□ -0.28
DDX56-202ENST00000415758 CXCR1P25024 350 aa13.32□□□□□ -0.28
DDX56-202ENST00000415758 THBS4P35443 961 aa13.32□□□□□ -0.28
DDX56-202ENST00000415758 COMPP49747 757 aaPredicted RBP13.32□□□□□ -0.28
DDX56-202ENST00000415758 SH3BGRP55822 239 aaPredicted RBP13.32□□□□□ -0.28
DDX56-202ENST00000415758 SYPL1Q16563 259 aa13.32□□□□□ -0.28
DDX56-202ENST00000415758 DPY19L1Q2PZI1 675 aa13.32□□□□□ -0.28
DDX56-202ENST00000415758 MRPL2Q5T653 305 aaKnown RBP13.32□□□□□ -0.28
DDX56-202ENST00000415758 LSRQ86X29 649 aaPredicted RBP13.32□□□□□ -0.28
DDX56-202ENST00000415758 EPHX4Q8IUS5 362 aa13.32□□□□□ -0.28
DDX56-202ENST00000415758 ZNF440Q8IYI8 595 aa13.32□□□□□ -0.28
DDX56-202ENST00000415758 SEMA6DQ8NFY4 1073 aa13.32□□□□□ -0.28
DDX56-202ENST00000415758 TCP10LQ8TDR4 215 aa13.32□□□□□ -0.28
DDX56-202ENST00000415758 UBASH3BQ8TF42 649 aa13.32□□□□□ -0.28
DDX56-202ENST00000415758 SLC35A5Q9BS91 424 aa13.32□□□□□ -0.28
DDX56-202ENST00000415758 AKTIPQ9H8T0 292 aa13.32□□□□□ -0.28
DDX56-202ENST00000415758 SEC61A2Q9H9S3 476 aa13.32□□□□□ -0.28
DDX56-202ENST00000415758 A8MVM7 634 aa13.31□□□□□ -0.28
DDX56-202ENST00000415758 B4DSR2 109 aa13.31□□□□□ -0.28
DDX56-202ENST00000415758 NPIPB7O75200 414 aa13.31□□□□□ -0.28
DDX56-202ENST00000415758 C1QCP02747 245 aa13.31□□□□□ -0.28
DDX56-202ENST00000415758 DBIP07108 87 aaKnown RBP13.31□□□□□ -0.28
DDX56-202ENST00000415758 IFNGR1P15260 489 aa13.31□□□□□ -0.28
DDX56-202ENST00000415758 CHI3L1P36222 383 aaPredicted RBP13.31□□□□□ -0.28
DDX56-202ENST00000415758 ACAA2P42765 397 aaKnown RBP13.31□□□□□ -0.28
DDX56-202ENST00000415758 TUBA1BP68363 451 aa13.31□□□□□ -0.28
DDX56-202ENST00000415758 TUBA4AP68366 448 aa13.31□□□□□ -0.28
DDX56-202ENST00000415758 TRIP10Q15642 601 aa13.31□□□□□ -0.28
DDX56-202ENST00000415758 ADRM1Q16186 407 aa13.31□□□□□ -0.28
DDX56-202ENST00000415758 NIPAL3Q6P499 406 aa13.31□□□□□ -0.28
DDX56-202ENST00000415758 TUBA1AQ71U36 451 aa13.31□□□□□ -0.28
DDX56-202ENST00000415758 RNF130Q86XS8 419 aa13.31□□□□□ -0.28
DDX56-202ENST00000415758 SVOPLQ8N434 492 aa13.31□□□□□ -0.28
DDX56-202ENST00000415758 IL17RDQ8NFM7 739 aa13.31□□□□□ -0.28
DDX56-202ENST00000415758 CCDC115Q96NT0 180 aa13.31□□□□□ -0.28
DDX56-202ENST00000415758 ALKBH3Q96Q83 286 aaPredicted RBP13.31□□□□□ -0.28
DDX56-202ENST00000415758 TAPBPLQ9BX59 468 aa13.31□□□□□ -0.28
DDX56-202ENST00000415758 ADPRHL2Q9NX46 363 aa13.31□□□□□ -0.28
DDX56-202ENST00000415758 BTNL2Q9UIR0 455 aa13.31□□□□□ -0.28
DDX56-202ENST00000415758 RASD1Q9Y272 281 aa13.31□□□□□ -0.28
DDX56-202ENST00000415758 A0A096LPE4 126 aa13.3□□□□□ -0.28
DDX56-202ENST00000415758 IGHV2OR16-5A0A0B4J2B6 119 aa13.3□□□□□ -0.28
DDX56-202ENST00000415758 A0A1W2PPZ6 126 aa13.3□□□□□ -0.28
DDX56-202ENST00000415758 CDHR4A6H8M9 788 aa13.3□□□□□ -0.28
DDX56-202ENST00000415758 ZNF432O94892 652 aa13.3□□□□□ -0.28
DDX56-202ENST00000415758 BPGMP07738 259 aa13.3□□□□□ -0.28
DDX56-202ENST00000415758 TFPTP0C1Z6 253 aa13.3□□□□□ -0.28
DDX56-202ENST00000415758 ARR3P36575 388 aa13.3□□□□□ -0.28
DDX56-202ENST00000415758 EVX1P49640 407 aa13.3□□□□□ -0.28
DDX56-202ENST00000415758 ANXA11P50995 505 aaKnown RBP13.3□□□□□ -0.28
DDX56-202ENST00000415758 ROR2Q01974 943 aaKnown RBP13.3□□□□□ -0.28
DDX56-202ENST00000415758 SPANXN4Q5MJ08 99 aa13.3□□□□□ -0.28
DDX56-202ENST00000415758 WBP2NLQ6ICG8 309 aa13.3□□□□□ -0.28
DDX56-202ENST00000415758 SPATA21Q7Z572 469 aa13.3□□□□□ -0.28
DDX56-202ENST00000415758 MYPOPQ86VE0 399 aaPredicted RBP13.3□□□□□ -0.28
DDX56-202ENST00000415758 LRRC34Q8IZ02 419 aa13.3□□□□□ -0.28
DDX56-202ENST00000415758 RIBC1Q8N443 379 aaPredicted RBP13.3□□□□□ -0.28
DDX56-202ENST00000415758 CKAP2Q8WWK9 683 aa13.3□□□□□ -0.28
DDX56-202ENST00000415758 A0A096LPI6 279 aa13.29□□□□□ -0.28
DDX56-202ENST00000415758 TLDC2A0PJX2 215 aa13.29□□□□□ -0.28
DDX56-202ENST00000415758 FRS3O43559 492 aa13.29□□□□□ -0.28
DDX56-202ENST00000415758 SPAG7O75391 227 aa13.29□□□□□ -0.28
DDX56-202ENST00000415758 CELA3BP08861 270 aa13.29□□□□□ -0.28
DDX56-202ENST00000415758 CLNS1AP54105 237 aaKnown RBP13.29□□□□□ -0.28
DDX56-202ENST00000415758 BNIP2Q12982 314 aa13.29□□□□□ -0.28
DDX56-202ENST00000415758 FAM174BQ3ZCQ3 159 aa13.29□□□□□ -0.28
DDX56-202ENST00000415758 C1orf140Q5VVS0 124 aa13.29□□□□□ -0.28
DDX56-202ENST00000415758 PRAMEF8Q5VWM4 474 aa13.29□□□□□ -0.28
DDX56-202ENST00000415758 PRAMEF7Q5VXH5 474 aa13.29□□□□□ -0.28
DDX56-202ENST00000415758 CCDC36Q8IYA8 594 aa13.29□□□□□ -0.28
DDX56-202ENST00000415758 PEX5LQ8IYB4 626 aa13.29□□□□□ -0.28
DDX56-202ENST00000415758 ZMYND19Q96E35 227 aaPredicted RBP13.29□□□□□ -0.28
DDX56-202ENST00000415758 RACGAP1Q9H0H5 632 aa13.29□□□□□ -0.28
DDX56-202ENST00000415758 OCEL1Q9H607 264 aa13.29□□□□□ -0.28
DDX56-202ENST00000415758 DYNLRB1Q9NP97 96 aa13.29□□□□□ -0.28
DDX56-202ENST00000415758 RLIMQ9NVW2 624 aa13.29□□□□□ -0.28
DDX56-202ENST00000415758 RCE1Q9Y256 329 aa13.29□□□□□ -0.28
DDX56-202ENST00000415758 MGAM2Q2M2H8 2515 aa13.28□□□□□ -0.28
DDX56-202ENST00000415758 SH3PXD2BA1X283 911 aa13.28□□□□□ -0.28
DDX56-202ENST00000415758 CCDC154A6NI56 674 aa13.28□□□□□ -0.28
DDX56-202ENST00000415758 FTCDNL1E5RQL4 147 aa13.28□□□□□ -0.28
DDX56-202ENST00000415758 ADRA2AP08913 450 aa13.28□□□□□ -0.28
DDX56-202ENST00000415758 GKN3PP0CG01 181 aa13.28□□□□□ -0.28
DDX56-202ENST00000415758 NR2F1P10589 423 aa13.28□□□□□ -0.28
DDX56-202ENST00000415758 EGR1P18146 543 aa13.28□□□□□ -0.28
DDX56-202ENST00000415758 S100A3P33764 101 aa13.28□□□□□ -0.28
DDX56-202ENST00000415758 ETV4P43268 484 aa13.28□□□□□ -0.28
DDX56-202ENST00000415758 COPZ1P61923 177 aa13.28□□□□□ -0.28
DDX56-202ENST00000415758 ARF1P84077 181 aaKnown RBP13.28□□□□□ -0.28
DDX56-202ENST00000415758 SCGB2A2Q13296 93 aa13.28□□□□□ -0.28
DDX56-202ENST00000415758 MAPK11Q15759 364 aa13.28□□□□□ -0.28
DDX56-202ENST00000415758 PDCD2Q16342 344 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms