RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 EIF1BO60739 113 aaKnown RBP11.89□□□□□ -0.51
CNN3-203ENST00000415017 OPN1LWP04000 364 aa11.89□□□□□ -0.51
CNN3-203ENST00000415017 TFPIP10646 304 aa11.89□□□□□ -0.51
CNN3-203ENST00000415017 GPR4P46093 362 aa11.89□□□□□ -0.51
CNN3-203ENST00000415017 CSNK2A1P68400 391 aaPredicted RBP11.89□□□□□ -0.51
CNN3-203ENST00000415017 SLC35A1P78382 337 aa11.89□□□□□ -0.51
CNN3-203ENST00000415017 HSF1Q00613 529 aa11.89□□□□□ -0.51
CNN3-203ENST00000415017 POU4F3Q15319 338 aa11.89□□□□□ -0.51
CNN3-203ENST00000415017 MS4A18Q3C1V0 323 aa11.89□□□□□ -0.51
CNN3-203ENST00000415017 ZBED5Q49AG3 693 aa11.89□□□□□ -0.51
CNN3-203ENST00000415017 OTUD3Q5T2D3 398 aaPredicted RBP11.89□□□□□ -0.51
CNN3-203ENST00000415017 HBMQ6B0K9 141 aa11.89□□□□□ -0.51
CNN3-203ENST00000415017 PAQR6Q6TCH4 344 aa11.89□□□□□ -0.51
CNN3-203ENST00000415017 ZNF620Q6ZNG0 422 aa11.89□□□□□ -0.51
CNN3-203ENST00000415017 Q6ZPB1 254 aaPredicted RBP11.89□□□□□ -0.51
CNN3-203ENST00000415017 H1FNTQ75WM6 255 aaPredicted RBP11.89□□□□□ -0.51
CNN3-203ENST00000415017 MEX3DQ86XN8 651 aaKnown RBP11.89□□□□□ -0.51
CNN3-203ENST00000415017 PM20D2Q8IYS1 436 aa11.89□□□□□ -0.51
CNN3-203ENST00000415017 SLC43A2Q8N370 569 aa11.89□□□□□ -0.51
CNN3-203ENST00000415017 MEIOBQ8N635 442 aa11.89□□□□□ -0.51
CNN3-203ENST00000415017 ATP6V1C2Q8NEY4 427 aa11.89□□□□□ -0.51
CNN3-203ENST00000415017 OR5J2Q8NH18 312 aa11.89□□□□□ -0.51
CNN3-203ENST00000415017 OSTF1Q92882 214 aa11.89□□□□□ -0.51
CNN3-203ENST00000415017 TNFRSF13CQ96RJ3 184 aa11.89□□□□□ -0.51
CNN3-203ENST00000415017 GABARAPL3Q9BY60 117 aa11.89□□□□□ -0.51
CNN3-203ENST00000415017 ENKD1Q9H0I2 346 aa11.89□□□□□ -0.51
CNN3-203ENST00000415017 MCCC2Q9HCC0 563 aa11.89□□□□□ -0.51
CNN3-203ENST00000415017 B3GAT1Q9P2W7 334 aa11.89□□□□□ -0.51
CNN3-203ENST00000415017 SEC14L4Q9UDX3 406 aa11.89□□□□□ -0.51
CNN3-203ENST00000415017 ALPK2Q86TB3 2170 aa11.89□□□□□ -0.51
CNN3-203ENST00000415017 A0A1W2PNV4 684 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 NPIPB13A6NJU9 1138 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 AHRRA9YTQ3 701 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 NPIPB4C9JG80 1138 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 M0R082 166 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 EIF1AYO14602 144 aaKnown RBP11.88□□□□□ -0.51
CNN3-203ENST00000415017 TNFSF11O14788 317 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 OSMP13725 252 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 SLC16A1P53985 500 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 CARD18P57730 90 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 ESRRGP62508 458 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 FOXD4Q12950 439 aaPredicted RBP11.88□□□□□ -0.51
CNN3-203ENST00000415017 PDK3Q15120 406 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 OR7A5Q15622 319 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 PDSS1Q5T2R2 415 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 ABLIM2Q6H8Q1 611 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 OAFQ86UD1 273 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 TMEM99Q8N816 258 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 ATG16L2Q8NAA4 619 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 OR13C2Q8NGS9 318 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 ZNF417Q8TAU3 575 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 FAM57AQ8TBR7 257 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 GTPBP3Q969Y2 492 aaKnown RBP11.88□□□□□ -0.51
CNN3-203ENST00000415017 CPNE4Q96A23 557 aaPredicted RBP11.88□□□□□ -0.51
CNN3-203ENST00000415017 SDCCAG3Q96C92 435 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 ZNF587Q96SQ5 575 aaPredicted RBP11.88□□□□□ -0.51
CNN3-203ENST00000415017 TUBA1CQ9BQE3 449 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 TAPBPLQ9BX59 468 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 CHST11Q9NPF2 352 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 PAPOLBQ9NRJ5 636 aaKnown RBP11.88□□□□□ -0.51
CNN3-203ENST00000415017 CLCF1Q9UBD9 225 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 TNFRSF10DQ9UBN6 386 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 ING1Q9UK53 422 aaPredicted RBP11.88□□□□□ -0.51
CNN3-203ENST00000415017 ZNF175Q9Y473 711 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 CDH10Q9Y6N8 788 aa11.88□□□□□ -0.51
CNN3-203ENST00000415017 ZNF716A6NP11 495 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 CXCL13O43927 109 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 CYTIPO60759 359 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 RAMP1O60894 148 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 MITFO75030 526 aaPredicted RBP11.87□□□□□ -0.51
CNN3-203ENST00000415017 VAMP5O95183 116 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 POU2F1P14859 743 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 KLK2P20151 261 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 IGFBP5P24593 272 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 PTGS2P35354 604 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 VHLP40337 213 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 PRPS1P60891 318 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 RPS3AP61247 264 aaKnown RBP11.87□□□□□ -0.51
CNN3-203ENST00000415017 RFX4Q33E94 735 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 GXYLT1Q4G148 440 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 RPL13AP3Q6NVV1 102 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 SMARCD3Q6STE5 483 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 THSD4Q6ZMP0 1018 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 UBQLNLQ8IYU4 475 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 ST6GALNAC3Q8NDV1 305 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 OR8D4Q8NGM9 314 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 MAGEE2Q8TD90 523 aaPredicted RBP11.87□□□□□ -0.51
CNN3-203ENST00000415017 RNF128Q8TEB7 428 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 SLC25A36Q96CQ1 311 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 ZNF845Q96IR2 970 aaPredicted RBP11.87□□□□□ -0.51
CNN3-203ENST00000415017 MBOAT4Q96T53 435 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 SF3B5Q9BWJ5 86 aaKnown RBP11.87□□□□□ -0.51
CNN3-203ENST00000415017 PLA2G12AQ9BZM1 189 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 GRIP2Q9C0E4 1043 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 OR52D1Q9H346 318 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 RNF122Q9H9V4 155 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 ZNF556Q9HAH1 456 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 NRIP3Q9NQ35 241 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 TIGARQ9NQ88 270 aa11.87□□□□□ -0.51
CNN3-203ENST00000415017 KRT84Q9NSB2 600 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms