RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 SIRPAP78324 504 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 HLA-BQ31612 363 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 TMEM215Q68D42 235 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 VASNQ6EMK4 673 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 PGAP1Q75T13 922 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 PXKQ7Z7A4 578 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 BCORP1Q8N888 145 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 ZFP41Q8N8Y5 198 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 PRRT1Q99946 306 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 ISYNA1Q9NPH2 558 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 NOTOA8MTQ0 251 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 ZNF587BE7ETH6 402 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 ARHGAP33O14559 1287 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 RFPL3O75679 317 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 PAPLNO95428 1278 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 UBBP0CG47 229 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 FUT4P22083 530 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 DRD3P35462 400 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 TRMT12Q53H54 448 aaKnown RBP11.03□□□□□ -0.64
PTPRF-205ENST00000414879 YIF1BQ5BJH7 314 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 FAM26EQ8N5C1 309 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 INTS12Q96CB8 462 aaKnown RBP11.03□□□□□ -0.64
PTPRF-205ENST00000414879 RADILQ96JH8 1075 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 GABARAPL3Q9BY60 117 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 ZNF814B7Z6K7 855 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 RAC2P15153 192 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 DRD5P21918 477 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 AQP2P41181 271 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 BMXP51813 675 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 ADARB1P78563 741 aaKnown RBP11.03□□□□□ -0.64
PTPRF-205ENST00000414879 FZD2Q14332 565 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 HBMQ6B0K9 141 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 SLC16A9Q7RTY1 509 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 NKAIN3Q8N8D7 197 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 STK35Q8TDR2 534 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 ZNF431Q8TF32 576 aaPredicted RBP11.03□□□□□ -0.64
PTPRF-205ENST00000414879 ITPKCQ96DU7 683 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 EDEM2Q9BV94 578 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 UBQLN3Q9H347 655 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 CDCP1Q9H5V8 836 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 MOB1AQ9H8S9 216 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 TFPTP0C1Z6 253 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 ARSBP15848 533 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 PTBP1P26599 531 aaKnown RBP eCLIP11.03□□□□□ -0.644e-7■■■■□ 23.8
PTPRF-205ENST00000414879 NR4A2P43354 598 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 MECP2P51608 486 aaKnown RBP11.03□□□□□ -0.64
PTPRF-205ENST00000414879 GPR85P60893 370 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 RPL27P61353 136 aaKnown RBP11.03□□□□□ -0.64
PTPRF-205ENST00000414879 LILRA2Q8N149 483 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 GJC3Q8NFK1 279 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 FAM71F1Q96KD3 344 aaPredicted RBP11.03□□□□□ -0.64
PTPRF-205ENST00000414879 EGLN3Q9H6Z9 239 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 SLC25A19Q9HC21 320 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 NUBP2Q9Y5Y2 271 aa11.03□□□□□ -0.64
PTPRF-205ENST00000414879 TRAV18A0A075B6X5 111 aa11.02□□□□□ -0.64
PTPRF-205ENST00000414879 TMEM129A0AVI4 362 aa11.02□□□□□ -0.64
PTPRF-205ENST00000414879 GNRHRP30968 328 aa11.02□□□□□ -0.64
PTPRF-205ENST00000414879 PIGAP37287 484 aa11.02□□□□□ -0.64
PTPRF-205ENST00000414879 FASLGP48023 281 aa11.02□□□□□ -0.64
PTPRF-205ENST00000414879 CLDN17P56750 224 aa11.02□□□□□ -0.64
PTPRF-205ENST00000414879 CMTM1Q8IZ96 169 aa11.02□□□□□ -0.64
PTPRF-205ENST00000414879 ADGRF3Q8IZF5 1079 aa11.02□□□□□ -0.64
PTPRF-205ENST00000414879 OR7G2Q8NG99 324 aa11.02□□□□□ -0.64
PTPRF-205ENST00000414879 OR51T1Q8NGJ9 327 aa11.02□□□□□ -0.64
PTPRF-205ENST00000414879 ZBTB8AQ96BR9 441 aa11.02□□□□□ -0.64
PTPRF-205ENST00000414879 CCDC74BQ96LY2 380 aa11.02□□□□□ -0.64
PTPRF-205ENST00000414879 CSF3RQ99062 836 aa11.02□□□□□ -0.64
PTPRF-205ENST00000414879 ETV7Q9Y603 341 aa11.02□□□□□ -0.64
PTPRF-205ENST00000414879 MTCH2Q9Y6C9 303 aa11.02□□□□□ -0.64
PTPRF-205ENST00000414879 NUP205Q92621 2012 aa11.02□□□□□ -0.64
PTPRF-205ENST00000414879 FUOMA2VDF0 154 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 PMS2P1A4D2B8 440 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 NPIPB8E9PQR5 432 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 P2RX6O15547 441 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 HTR3BO95264 441 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 CYC1P08574 325 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 SIGLEC14Q08ET2 396 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 Q499Y3 187 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 IQCF2Q8IXL9 164 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 SLC25A44Q96H78 314 aaPredicted RBP11.02□□□□□ -0.65
PTPRF-205ENST00000414879 ACER3Q9NUN7 267 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 FKBP14Q9NWM8 211 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 NDRG4Q9ULP0 352 aaKnown RBP11.02□□□□□ -0.65
PTPRF-205ENST00000414879 A0A1W2PPK0 400 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 C7orf72A4D263 438 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 SLC35F4A4IF30 521 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 ZNF593O00488 134 aaPredicted RBP11.02□□□□□ -0.65
PTPRF-205ENST00000414879 CD160O95971 181 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 SERPINA5P05154 406 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 CCDC58Q4VC31 144 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 METTL11BQ5VVY1 283 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 IGFN1Q86VF2 1251 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 CCL4L1Q8NHW4 92 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 CNOT9Q92600 299 aaKnown RBP11.02□□□□□ -0.65
PTPRF-205ENST00000414879 OR2A14Q96R47 310 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 SYT4Q9H2B2 425 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 ERVMER34-1Q9H9K5 563 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 MAN2C1Q9NTJ4 1040 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 OTOFQ9HC10 1997 aa11.02□□□□□ -0.65
PTPRF-205ENST00000414879 LOC105369274A0A096LPK9 316 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms