RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 HSD17B8Q92506 261 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 HIST1H2ACQ93077 130 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 TMEM45BQ96B21 275 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 SLC41A3Q96GZ6 507 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 NSL1Q96IY1 281 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 RSPO3Q9BXY4 272 aaPredicted RBP13.04□□□□□ -0.32
CHD1-202ENST00000414220 SLC19A3Q9BZV2 496 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 ACTR6Q9GZN1 396 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 ASB6Q9NWX5 421 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 FAM53CQ9NYF3 392 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 SLC7A7Q9UM01 511 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 USP22Q9UPT9 525 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 FLVCR1Q9Y5Y0 555 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 CIB4A0PJX0 185 aa13.03□□□□□ -0.32
CHD1-202ENST00000414220 FTCDNL1E5RQL4 147 aa13.03□□□□□ -0.32
CHD1-202ENST00000414220 SHOX2O60902 331 aaPredicted RBP13.03□□□□□ -0.32
CHD1-202ENST00000414220 GRPRP30550 384 aa13.03□□□□□ -0.32
CHD1-202ENST00000414220 TGFBR3Q03167 851 aa13.03□□□□□ -0.32
CHD1-202ENST00000414220 ST3GAL3Q11203 375 aa13.03□□□□□ -0.32
CHD1-202ENST00000414220 PMS2P3Q13401 168 aa13.03□□□□□ -0.32
CHD1-202ENST00000414220 POU4F3Q15319 338 aa13.03□□□□□ -0.32
CHD1-202ENST00000414220 SPATS1Q496A3 300 aa13.03□□□□□ -0.32
CHD1-202ENST00000414220 IFI44LQ53G44 452 aa13.03□□□□□ -0.32
CHD1-202ENST00000414220 SAMD4BQ5PRF9 694 aaKnown RBP13.03□□□□□ -0.32
CHD1-202ENST00000414220 ANKRD34AQ69YU3 496 aa13.03□□□□□ -0.32
CHD1-202ENST00000414220 GLYATQ6IB77 296 aa13.03□□□□□ -0.32
CHD1-202ENST00000414220 CBLL1Q75N03 491 aa13.03□□□□□ -0.32
CHD1-202ENST00000414220 BHLHA15Q7RTS1 189 aaPredicted RBP13.03□□□□□ -0.32
CHD1-202ENST00000414220 CYP4Z1Q86W10 505 aa13.03□□□□□ -0.32
CHD1-202ENST00000414220 RBM45Q8IUH3 476 aaKnown RBP13.03□□□□□ -0.32
CHD1-202ENST00000414220 SCAIQ8N9R8 606 aa13.03□□□□□ -0.32
CHD1-202ENST00000414220 POMGNT2Q8NAT1 580 aa13.03□□□□□ -0.32
CHD1-202ENST00000414220 GEMIN6Q8WXD5 167 aaKnown RBP13.03□□□□□ -0.32
CHD1-202ENST00000414220 TAAR8Q969N4 342 aa13.03□□□□□ -0.32
CHD1-202ENST00000414220 MUCL1Q96DR8 90 aa13.03□□□□□ -0.32
CHD1-202ENST00000414220 ZC3HAV1LQ96H79 300 aaKnown RBP13.03□□□□□ -0.32
CHD1-202ENST00000414220 HS6ST2Q96MM7 605 aa13.03□□□□□ -0.32
CHD1-202ENST00000414220 OXGR1Q96P68 337 aa13.03□□□□□ -0.32
CHD1-202ENST00000414220 WFDC6Q9BQY6 131 aa13.03□□□□□ -0.32
CHD1-202ENST00000414220 PTDSS2Q9BVG9 487 aa13.03□□□□□ -0.32
CHD1-202ENST00000414220 PRSS50Q9UI38 385 aa13.03□□□□□ -0.32
CHD1-202ENST00000414220 SAMD4AQ9UPU9 718 aaKnown RBP13.03□□□□□ -0.32
CHD1-202ENST00000414220 HTR3EA5X5Y0 456 aa13.02□□□□□ -0.33
CHD1-202ENST00000414220 CYSRT1A8MQ03 144 aa13.02□□□□□ -0.33
CHD1-202ENST00000414220 ZNF814B7Z6K7 855 aa13.02□□□□□ -0.33
CHD1-202ENST00000414220 RAMP1O60894 148 aa13.02□□□□□ -0.33
CHD1-202ENST00000414220 SERPINA1P01009 418 aa13.02□□□□□ -0.33
CHD1-202ENST00000414220 GGT1P19440 569 aa13.02□□□□□ -0.33
CHD1-202ENST00000414220 CRYGSP22914 178 aa13.02□□□□□ -0.33
CHD1-202ENST00000414220 RBM34P42696 430 aaKnown RBP13.02□□□□□ -0.33
CHD1-202ENST00000414220 OR1E2P47887 323 aa13.02□□□□□ -0.33
CHD1-202ENST00000414220 CRYBA2P53672 197 aa13.02□□□□□ -0.33
CHD1-202ENST00000414220 OR7E24Q6IFN5 339 aa13.02□□□□□ -0.33
CHD1-202ENST00000414220 LINC00114Q6XXX2 140 aa13.02□□□□□ -0.33
CHD1-202ENST00000414220 CREB3L2Q70SY1 520 aa13.02□□□□□ -0.33
CHD1-202ENST00000414220 P2RY8Q86VZ1 359 aa13.02□□□□□ -0.33
CHD1-202ENST00000414220 UEVLDQ8IX04 471 aa13.02□□□□□ -0.33
CHD1-202ENST00000414220 ADPRHL1Q8NDY3 354 aa13.02□□□□□ -0.33
CHD1-202ENST00000414220 OR4D11Q8NGI4 311 aa13.02□□□□□ -0.33
CHD1-202ENST00000414220 BCAS4Q8TDM0 211 aa13.02□□□□□ -0.33
CHD1-202ENST00000414220 ARL8BQ9NVJ2 186 aa13.02□□□□□ -0.33
CHD1-202ENST00000414220 TAS2R16Q9NYV7 291 aa13.02□□□□□ -0.33
CHD1-202ENST00000414220 MAGEL2Q9UJ55 1249 aa13.02□□□□□ -0.33
CHD1-202ENST00000414220 RIMS3Q9UJD0 308 aa13.02□□□□□ -0.33
CHD1-202ENST00000414220 FAM32AQ9Y421 112 aaKnown RBP13.02□□□□□ -0.33
CHD1-202ENST00000414220 CACNA1DQ01668 2161 aa13.02□□□□□ -0.33
CHD1-202ENST00000414220 UNC79Q9P2D8 2635 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 IGKV1D-42A0A075B6H8 117 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 LOC102725191A0A1B0GVB3 256 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 FAM221AA4D161 298 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 B2RBV5 119 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 M0R082 166 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 UMPSP11172 480 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 CALB2P22676 271 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 CBLP22681 906 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 AHCYP23526 432 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 HOXC12P31275 282 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 NR1H2P55055 460 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 FAPQ12884 760 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 BEX5Q5H9J7 111 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.01□□□□□ -0.33
CHD1-202ENST00000414220 P3H2Q8IVL5 708 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 DEFB107AQ8IZN7 70 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 ARHGAP24Q8N264 748 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 FITM2Q8N6M3 262 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 ZNF417Q8TAU3 575 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 S100PBPQ96BU1 408 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 ZNF587Q96SQ5 575 aaPredicted RBP13.01□□□□□ -0.33
CHD1-202ENST00000414220 CDRT15Q96T59 188 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 FNDC11Q9BVV2 318 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 SLCO5A1Q9H2Y9 848 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 FKRPQ9H9S5 495 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 NANSQ9NR45 359 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 MRPL39Q9NYK5 338 aaKnown RBP13.01□□□□□ -0.33
CHD1-202ENST00000414220 MALT1Q9UDY8 824 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 EGFL7Q9UHF1 273 aa13.01□□□□□ -0.33
CHD1-202ENST00000414220 FZD7O75084 574 aa13□□□□□ -0.33
CHD1-202ENST00000414220 LYZL6O75951 148 aa13□□□□□ -0.33
CHD1-202ENST00000414220 STAMBPO95630 424 aa13□□□□□ -0.33
CHD1-202ENST00000414220 IGHV3-9P01782 118 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms