RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 TMEM71Q6P5X7 295 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 OR4F15Q8NGB8 312 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 KCTD12Q96CX2 325 aaKnown RBP15.97■□□□□ 0.15
PHRF1-202ENST00000413872 CCDC86Q9H6F5 360 aaKnown RBP15.97■□□□□ 0.15
PHRF1-202ENST00000413872 ADAMTS7Q9UKP4 1686 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 PPICP45877 212 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 STT3AP46977 705 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 OR51B6Q9H340 312 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 TUBB1Q9H4B7 451 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 NLKQ9UBE8 527 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 SURF4O15260 269 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 CHRNB4P30926 498 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 BDH1Q02338 343 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 ARHGAP11BQ3KRB8 267 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 SAXO2Q658L1 398 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 H1FNTQ75WM6 255 aaPredicted RBP15.97■□□□□ 0.15
PHRF1-202ENST00000413872 RSPRY1Q96DX4 576 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 EDEM2Q9BV94 578 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 LOXL2Q9Y4K0 774 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 EEF1E1-BLOC1S5C9J1V9 151 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 TPOP07202 933 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 CTSLP07711 333 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 NID1P14543 1247 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 UQCRC1P31930 480 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 EMX1Q04741 257 aaPredicted RBP15.97■□□□□ 0.15
PHRF1-202ENST00000413872 ZNF836Q6ZNA1 936 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 MARCH3Q86UD3 253 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 OR51E2Q9H255 320 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 ZNF226Q9NYT6 803 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 MYOTQ9UBF9 498 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 BCORQ6W2J9 1755 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 G3V3Y1 287 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 BMP1P13497 986 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 GABRG2P18507 467 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 DLSTP36957 453 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 LEXMQ3ZCV2 418 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 BRIX1Q8TDN6 353 aaKnown RBP15.96■□□□□ 0.15
PHRF1-202ENST00000413872 CALHM2Q9HA72 323 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 CPNE5Q9HCH3 593 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 WSB2Q9NYS7 404 aaPredicted RBP15.96■□□□□ 0.15
PHRF1-202ENST00000413872 NUMA1Q14980 2115 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 TMEM265A0A087WTH1 108 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 CYB5BO43169 146 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 B4GALT3O60512 393 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 SC5DO75845 299 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 CDK4P11802 303 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 FXYD4P59646 89 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 RPP30P78346 268 aaKnown RBP15.96■□□□□ 0.15
PHRF1-202ENST00000413872 RHEBQ15382 184 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 SLX4IPQ5VYV7 408 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 LRRC28Q86X40 367 aaPredicted RBP15.96■□□□□ 0.15
PHRF1-202ENST00000413872 MUL1Q969V5 352 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 HRASLS5Q96KN8 279 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 A0A1W2PR48 441 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 H3BMQ9 156 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 ATP6V1G1O75348 118 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 OLFM2O95897 454 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 SF3A2Q15428 464 aaKnown RBP15.96■□□□□ 0.15
PHRF1-202ENST00000413872 NKPD1Q17RQ9 610 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 ZNF813Q6ZN06 617 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 FUNDC1Q8IVP5 155 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 OR6T1Q8NGN1 323 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 RNF128Q8TEB7 428 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 PATE1Q8WXA2 126 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 PSMF1Q92530 271 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 COG8Q96MW5 612 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 NICN1Q9BSH3 213 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 OR2S2Q9NQN1 319 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 NUBP2Q9Y5Y2 271 aa15.96■□□□□ 0.15
PHRF1-202ENST00000413872 CLDN24A6NM45 220 aa15.96■□□□□ 0.14
PHRF1-202ENST00000413872 MSL3P1P0C860 447 aa15.96■□□□□ 0.14
PHRF1-202ENST00000413872 FOXK2Q01167 660 aa15.96■□□□□ 0.14
PHRF1-202ENST00000413872 LSAMPQ13449 338 aa15.96■□□□□ 0.14
PHRF1-202ENST00000413872 DUSP5Q16690 384 aa15.96■□□□□ 0.14
PHRF1-202ENST00000413872 C9orf135Q5VTT2 229 aa15.96■□□□□ 0.14
PHRF1-202ENST00000413872 NDUFAF7Q7L592 441 aa15.96■□□□□ 0.14
PHRF1-202ENST00000413872 LRRC18Q8N456 261 aa15.96■□□□□ 0.14
PHRF1-202ENST00000413872 ST6GALNAC5Q9BVH7 336 aa15.96■□□□□ 0.14
PHRF1-202ENST00000413872 PAQR5Q9NXK6 330 aaPredicted RBP15.96■□□□□ 0.14
PHRF1-202ENST00000413872 STRCP1A6NGW2 1772 aa15.96■□□□□ 0.14
PHRF1-202ENST00000413872 IL7P13232 177 aa15.95■□□□□ 0.14
PHRF1-202ENST00000413872 GABRR1P24046 479 aa15.95■□□□□ 0.14
PHRF1-202ENST00000413872 P2RY14Q15391 338 aa15.95■□□□□ 0.14
PHRF1-202ENST00000413872 MAVSQ7Z434 540 aa15.95■□□□□ 0.14
PHRF1-202ENST00000413872 ARL6Q9H0F7 186 aa15.95■□□□□ 0.14
PHRF1-202ENST00000413872 B3GNT2Q9NY97 397 aa15.95■□□□□ 0.14
PHRF1-202ENST00000413872 KIAA1551Q9HCM1 1747 aa15.95■□□□□ 0.14
PHRF1-202ENST00000413872 HMX2A2RU54 273 aa15.95■□□□□ 0.14
PHRF1-202ENST00000413872 ABHD16AO95870 558 aa15.95■□□□□ 0.14
PHRF1-202ENST00000413872 ETV6P41212 452 aa15.95■□□□□ 0.14
PHRF1-202ENST00000413872 DAPP51397 102 aa15.95■□□□□ 0.14
PHRF1-202ENST00000413872 SQSTM1Q13501 440 aa15.95■□□□□ 0.14
PHRF1-202ENST00000413872 ZNF750Q32MQ0 723 aa15.95■□□□□ 0.14
PHRF1-202ENST00000413872 OR4K15Q8NH41 348 aa15.95■□□□□ 0.14
PHRF1-202ENST00000413872 PHYHIPQ92561 330 aa15.95■□□□□ 0.14
PHRF1-202ENST00000413872 CNOT9Q92600 299 aaKnown RBP15.95■□□□□ 0.14
PHRF1-202ENST00000413872 MLXQ9UH92 298 aa15.95■□□□□ 0.14
PHRF1-202ENST00000413872 GABRA5P31644 462 aa15.95■□□□□ 0.14
PHRF1-202ENST00000413872 SIRPAP78324 504 aa15.95■□□□□ 0.14
PHRF1-202ENST00000413872 SPOCK1Q08629 439 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms