RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 UGT2A1Q9Y4X1 527 aa3.54□□□□□ -1.84
HMGB3P31-201ENST00000413333 KLF18A0A0U1RQI7 1052 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 A0A1W2PPV9 198 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 SMCO3A2RU48 225 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 OR2AG2A6NM03 316 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 LOC110117498-PIK3R3F6TDL0 507 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 DNALI1O14645 258 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 TNFSF11O14788 317 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 PHOX2AO14813 284 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 IGHV3-23P01764 117 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 UBTFL1P0CB47 393 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 SFTPCP11686 197 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 PSMB1P20618 241 aaKnown RBP3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 KITLGP21583 273 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 SYKP43405 635 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 KLK7P49862 253 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 DSCR10P59022 87 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 SELENOTP62341 195 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 KCNJ2P63252 427 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 TGFBIQ15582 683 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 UTF1Q5T230 341 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 LRRC66Q68CR7 880 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 P2RY8Q86VZ1 359 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 ZBED8Q8IZ13 594 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 CCDC148Q8NFR7 591 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 FAM81AQ8TBF8 368 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 ZNF564Q8TBZ8 553 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 ANKRD9Q96BM1 317 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 TM4SF19Q96DZ7 209 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 TECTBQ96PL2 329 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 ANKRA2Q9H9E1 313 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 NEK6Q9HC98 313 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 SLC7A10Q9NS82 523 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 MMP17Q9ULZ9 603 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 VSIG4Q9Y279 399 aa3.53□□□□□ -1.84
HMGB3P31-201ENST00000413333 IGHV1OR21-1A0A087WYE8 117 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 FAM168BA1KXE4 195 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 CCDC182A6NF36 153 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 PPP1R2P9O14990 202 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 HSPB1P04792 205 aaKnown RBP3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 CRYGBP07316 175 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 GALP22466 123 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 SLC2A5P22732 501 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 CXCR2P25025 360 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 IFNA8P32881 189 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 FDFT1P37268 417 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 CDH6P55285 790 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 ZNF45Q02386 682 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 TGFBR3Q03167 851 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 TLE4Q04727 773 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 GNMTQ14749 295 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 SLC1A5Q15758 541 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 KYAT1Q16773 422 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 PRR30Q53SZ7 412 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 C1orf146Q5VVC0 180 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 RAET1LQ5VY80 246 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 TMEM179BQ7Z7N9 219 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 RDH10Q8IZV5 341 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 FNDC5Q8NAU1 212 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 BRSK1Q8TDC3 778 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 PYROXD1Q8WU10 500 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 STMN2Q93045 179 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 TSNARE1Q96NA8 513 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 SMIM14Q96QK8 99 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 PANX1Q96RD7 426 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 MBOAT4Q96T53 435 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 TSG101Q99816 390 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 EBF4Q9BQW3 602 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 NICN1Q9BSH3 213 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 SELENOIQ9C0D9 397 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 POLR2J2Q9GZM3 115 aaKnown RBP3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 POLR2J3Q9H1A7 115 aaKnown RBP3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 EHD1Q9H4M9 534 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 KCNIP1Q9NZI2 227 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 KIF25Q9UIL4 384 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 BTNL2Q9UIR0 455 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 STARD10Q9Y365 291 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 N6AMT1Q9Y5N5 214 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 ABCA7Q8IZY2 2146 aa3.52□□□□□ -1.85
HMGB3P31-201ENST00000413333 RLFQ13129 1914 aa3.51□□□□□ -1.85
HMGB3P31-201ENST00000413333 IGHV3OR16-13A0A075B7E8 117 aa3.51□□□□□ -1.85
HMGB3P31-201ENST00000413333 IGKV3D-20A0A0C4DH25 116 aa3.51□□□□□ -1.85
HMGB3P31-201ENST00000413333 RBMY1BA6NDE4 496 aaKnown RBP3.51□□□□□ -1.85
HMGB3P31-201ENST00000413333 RBMY1EA6NEQ0 496 aaKnown RBP3.51□□□□□ -1.85
HMGB3P31-201ENST00000413333 TCP11X1B4DZS4 312 aa3.51□□□□□ -1.85
HMGB3P31-201ENST00000413333 ERLIN2O94905 339 aa3.51□□□□□ -1.85
HMGB3P31-201ENST00000413333 C1orf105O95561 183 aa3.51□□□□□ -1.85
HMGB3P31-201ENST00000413333 IGHV3-48P01763 117 aa3.51□□□□□ -1.85
HMGB3P31-201ENST00000413333 RBMY1DP0C7P1 496 aaKnown RBP3.51□□□□□ -1.85
HMGB3P31-201ENST00000413333 P0C879 139 aa3.51□□□□□ -1.85
HMGB3P31-201ENST00000413333 RBMY1A1P0DJD3 496 aaKnown RBP3.51□□□□□ -1.85
HMGB3P31-201ENST00000413333 HSD17B2P37059 387 aa3.51□□□□□ -1.85
HMGB3P31-201ENST00000413333 BTDP43251 543 aa3.51□□□□□ -1.85
HMGB3P31-201ENST00000413333 EGFEM1PQ0D2K5 195 aa3.51□□□□□ -1.85
HMGB3P31-201ENST00000413333 DGUOKQ16854 277 aa3.51□□□□□ -1.85
HMGB3P31-201ENST00000413333 TMIGD1Q6UXZ0 262 aa3.51□□□□□ -1.85
HMGB3P31-201ENST00000413333 PLA2G4DQ86XP0 818 aa3.51□□□□□ -1.85
HMGB3P31-201ENST00000413333 CEND1Q8N111 149 aa3.51□□□□□ -1.85
HMGB3P31-201ENST00000413333 ZNF740Q8NDX6 193 aa3.51□□□□□ -1.85
HMGB3P31-201ENST00000413333 OR2AP1Q8NGE2 309 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms