RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 HSD17B8Q92506 261 aa16.63■□□□□ 0.25
TRIM56-202ENST00000412507 PLPPR2Q96GM1 343 aa16.63■□□□□ 0.25
TRIM56-202ENST00000412507 ZNF385AQ96PM9 386 aaKnown RBP16.63■□□□□ 0.25
TRIM56-202ENST00000412507 SEC14L4Q9UDX3 406 aa16.63■□□□□ 0.25
TRIM56-202ENST00000412507 A0A087WUJ7 227 aa16.62■□□□□ 0.25
TRIM56-202ENST00000412507 CPSF4LA6NMK7 179 aaKnown RBP16.62■□□□□ 0.25
TRIM56-202ENST00000412507 AIM2O14862 343 aa16.62■□□□□ 0.25
TRIM56-202ENST00000412507 FMO6PO60774 539 aa16.62■□□□□ 0.25
TRIM56-202ENST00000412507 VAMP5O95183 116 aa16.62■□□□□ 0.25
TRIM56-202ENST00000412507 DRD4P21917 467 aa16.62■□□□□ 0.25
TRIM56-202ENST00000412507 GTF2E2P29084 291 aaKnown RBP16.62■□□□□ 0.25
TRIM56-202ENST00000412507 LSP1P33241 339 aa16.62■□□□□ 0.25
TRIM56-202ENST00000412507 FOXG1P55316 489 aaPredicted RBP16.62■□□□□ 0.25
TRIM56-202ENST00000412507 VEZF1Q14119 521 aa16.62■□□□□ 0.25
TRIM56-202ENST00000412507 STK11Q15831 433 aa16.62■□□□□ 0.25
TRIM56-202ENST00000412507 ENTPD8Q5MY95 495 aa16.62■□□□□ 0.25
TRIM56-202ENST00000412507 ERICH5Q6P6B1 374 aa16.62■□□□□ 0.25
TRIM56-202ENST00000412507 C5orf46Q6UWT4 87 aa16.62■□□□□ 0.25
TRIM56-202ENST00000412507 AAED1Q7RTV5 226 aa16.62■□□□□ 0.25
TRIM56-202ENST00000412507 KDM8Q8N371 416 aa16.62■□□□□ 0.25
TRIM56-202ENST00000412507 TMEM45BQ96B21 275 aa16.62■□□□□ 0.25
TRIM56-202ENST00000412507 UBTD1Q9HAC8 227 aa16.62■□□□□ 0.25
TRIM56-202ENST00000412507 SLC7A10Q9NS82 523 aa16.62■□□□□ 0.25
TRIM56-202ENST00000412507 ASB6Q9NWX5 421 aa16.62■□□□□ 0.25
TRIM56-202ENST00000412507 UPB1Q9UBR1 384 aa16.62■□□□□ 0.25
TRIM56-202ENST00000412507 MALT1Q9UDY8 824 aa16.62■□□□□ 0.25
TRIM56-202ENST00000412507 TRAV36DV7A0A075B6V5 113 aa16.61■□□□□ 0.25
TRIM56-202ENST00000412507 FAM220BPB1ANY3 271 aa16.61■□□□□ 0.25
TRIM56-202ENST00000412507 OR2T1O43869 369 aa16.61■□□□□ 0.25
TRIM56-202ENST00000412507 RAD51DO75771 328 aa16.61■□□□□ 0.25
TRIM56-202ENST00000412507 PLAUP00749 431 aa16.61■□□□□ 0.25
TRIM56-202ENST00000412507 GGT1P19440 569 aa16.61■□□□□ 0.25
TRIM56-202ENST00000412507 CBLP22681 906 aa16.61■□□□□ 0.25
TRIM56-202ENST00000412507 FAM69AQ5T7M9 428 aa16.61■□□□□ 0.25
TRIM56-202ENST00000412507 TSPO2Q5TGU0 170 aa16.61■□□□□ 0.25
TRIM56-202ENST00000412507 CREB3L2Q70SY1 520 aa16.61■□□□□ 0.25
TRIM56-202ENST00000412507 CPLX4Q7Z7G2 160 aa16.61■□□□□ 0.25
TRIM56-202ENST00000412507 RASSF5Q8WWW0 418 aa16.61■□□□□ 0.25
TRIM56-202ENST00000412507 FOXC2Q99958 501 aa16.61■□□□□ 0.25
TRIM56-202ENST00000412507 USB1Q9BQ65 265 aaKnown RBP16.61■□□□□ 0.25
TRIM56-202ENST00000412507 NSRP1Q9H0G5 558 aaKnown RBP16.61■□□□□ 0.25
TRIM56-202ENST00000412507 CMTM6Q9NX76 183 aa16.61■□□□□ 0.25
TRIM56-202ENST00000412507 GMPR2Q9P2T1 348 aaKnown RBP16.61■□□□□ 0.25
TRIM56-202ENST00000412507 RASD1Q9Y272 281 aa16.61■□□□□ 0.25
TRIM56-202ENST00000412507 PLCE1Q9P212 2302 aa16.61■□□□□ 0.25
TRIM56-202ENST00000412507 CIB4A0PJX0 185 aa16.6■□□□□ 0.25
TRIM56-202ENST00000412507 GMNCA6NCL1 334 aa16.6■□□□□ 0.25
TRIM56-202ENST00000412507 M0R082 166 aa16.6■□□□□ 0.25
TRIM56-202ENST00000412507 SNX3O60493 162 aa16.6■□□□□ 0.25
TRIM56-202ENST00000412507 ITGA5P08648 1049 aa16.6■□□□□ 0.25
TRIM56-202ENST00000412507 CD53P19397 219 aa16.6■□□□□ 0.25
TRIM56-202ENST00000412507 GRPRP30550 384 aa16.6■□□□□ 0.25
TRIM56-202ENST00000412507 NR1H2P55055 460 aa16.6■□□□□ 0.25
TRIM56-202ENST00000412507 GNGT1P63211 74 aa16.6■□□□□ 0.25
TRIM56-202ENST00000412507 SWT1Q5T5J6 900 aaKnown RBP16.6■□□□□ 0.25
TRIM56-202ENST00000412507 C9orf135Q5VTT2 229 aa16.6■□□□□ 0.25
TRIM56-202ENST00000412507 ZNF613Q6PF04 617 aa16.6■□□□□ 0.25
TRIM56-202ENST00000412507 TSPYL5Q86VY4 417 aaPredicted RBP16.6■□□□□ 0.25
TRIM56-202ENST00000412507 EPHX4Q8IUS5 362 aa16.6■□□□□ 0.25
TRIM56-202ENST00000412507 MICU2Q8IYU8 434 aa16.6■□□□□ 0.25
TRIM56-202ENST00000412507 OR2T12Q8NG77 320 aa16.6■□□□□ 0.25
TRIM56-202ENST00000412507 ZNF417Q8TAU3 575 aa16.6■□□□□ 0.25
TRIM56-202ENST00000412507 ZNF587Q96SQ5 575 aaPredicted RBP16.6■□□□□ 0.25
TRIM56-202ENST00000412507 MYLK2Q9H1R3 596 aa16.6■□□□□ 0.25
TRIM56-202ENST00000412507 PDLIM1O00151 329 aa16.59■□□□□ 0.25
TRIM56-202ENST00000412507 CHP2O43745 196 aa16.59■□□□□ 0.25
TRIM56-202ENST00000412507 FZD7O75084 574 aa16.59■□□□□ 0.25
TRIM56-202ENST00000412507 THY1P04216 161 aa16.59■□□□□ 0.25
TRIM56-202ENST00000412507 TNFRSF1BP20333 461 aa16.59■□□□□ 0.25
TRIM56-202ENST00000412507 LTBQ06643 244 aa16.59■□□□□ 0.25
TRIM56-202ENST00000412507 PPA1Q15181 289 aa16.59■□□□□ 0.25
TRIM56-202ENST00000412507 ACKR1Q16570 336 aa16.59■□□□□ 0.25
TRIM56-202ENST00000412507 LRRC23Q53EV4 343 aaPredicted RBP16.59■□□□□ 0.25
TRIM56-202ENST00000412507 TIMM23BQ5SRD1 257 aa16.59■□□□□ 0.25
TRIM56-202ENST00000412507 SEZ6L2Q6UXD5 910 aa16.59■□□□□ 0.25
TRIM56-202ENST00000412507 LINC00114Q6XXX2 140 aa16.59■□□□□ 0.25
TRIM56-202ENST00000412507 SPNS3Q6ZMD2 512 aa16.59■□□□□ 0.25
TRIM56-202ENST00000412507 ZNF704Q6ZNC4 412 aaPredicted RBP16.59■□□□□ 0.25
TRIM56-202ENST00000412507 ARPINQ7Z6K5 226 aa16.59■□□□□ 0.25
TRIM56-202ENST00000412507 SLC15A3Q8IY34 581 aa16.59■□□□□ 0.25
TRIM56-202ENST00000412507 ADAMTS16Q8TE57 1224 aa16.59■□□□□ 0.25
TRIM56-202ENST00000412507 PROX1Q92786 737 aa16.59■□□□□ 0.25
TRIM56-202ENST00000412507 MBD6Q96DN6 1003 aa16.59■□□□□ 0.25
TRIM56-202ENST00000412507 MUCL1Q96DR8 90 aa16.59■□□□□ 0.25
TRIM56-202ENST00000412507 EPYCQ99645 322 aa16.59■□□□□ 0.25
TRIM56-202ENST00000412507 TMEM43Q9BTV4 400 aa16.59■□□□□ 0.25
TRIM56-202ENST00000412507 SLCO5A1Q9H2Y9 848 aa16.59■□□□□ 0.25
TRIM56-202ENST00000412507 EFCAB1Q9HAE3 211 aa16.59■□□□□ 0.25
TRIM56-202ENST00000412507 NGBQ9NPG2 151 aa16.59■□□□□ 0.25
TRIM56-202ENST00000412507 TAS2R16Q9NYV7 291 aa16.59■□□□□ 0.25
TRIM56-202ENST00000412507 SH3GLB1Q9Y371 365 aa16.59■□□□□ 0.25
TRIM56-202ENST00000412507 VPS13CQ709C8 3753 aa16.58■□□□□ 0.25
TRIM56-202ENST00000412507 ELOVL7A1L3X0 281 aa16.58■□□□□ 0.24
TRIM56-202ENST00000412507 OR5H1A6NKK0 313 aa16.58■□□□□ 0.24
TRIM56-202ENST00000412507 LRRN3E7EW58 273 aa16.58■□□□□ 0.24
TRIM56-202ENST00000412507 LYPD3O95274 346 aa16.58■□□□□ 0.24
TRIM56-202ENST00000412507 BGLAPP02818 100 aa16.58■□□□□ 0.24
TRIM56-202ENST00000412507 KDELR2P33947 212 aa16.58■□□□□ 0.24
TRIM56-202ENST00000412507 SELENOPP49908 381 aa16.58■□□□□ 0.24
TRIM56-202ENST00000412507 GABRA6Q16445 453 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms