RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 C9orf135Q5VTT2 229 aa4.13□□□□□ -1.75
LSM5-206ENST00000409987 OR52W1Q6IF63 320 aa4.13□□□□□ -1.75
LSM5-206ENST00000409987 H3F3CQ6NXT2 135 aa4.13□□□□□ -1.75
LSM5-206ENST00000409987 C6orf89Q6UWU4 347 aa4.13□□□□□ -1.75
LSM5-206ENST00000409987 NIPA1Q7RTP0 329 aa4.13□□□□□ -1.75
LSM5-206ENST00000409987 CCDC71Q8IV32 467 aaPredicted RBP4.13□□□□□ -1.75
LSM5-206ENST00000409987 CD302Q8IX05 232 aa4.13□□□□□ -1.75
LSM5-206ENST00000409987 FAM9CQ8IZT9 166 aa4.13□□□□□ -1.75
LSM5-206ENST00000409987 ZNF781Q8N8C0 355 aa4.13□□□□□ -1.75
LSM5-206ENST00000409987 GATSQ8NAP1 163 aa4.13□□□□□ -1.75
LSM5-206ENST00000409987 OR4A15Q8NGL6 344 aa4.13□□□□□ -1.75
LSM5-206ENST00000409987 CLHC1Q8NHS4 586 aa4.13□□□□□ -1.75
LSM5-206ENST00000409987 KIFAP3Q92845 792 aa4.13□□□□□ -1.75
LSM5-206ENST00000409987 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.13□□□□□ -1.752e-6■■■■■ 59.4
LSM5-206ENST00000409987 OR5B2Q96R09 309 aa4.13□□□□□ -1.75
LSM5-206ENST00000409987 SLC35A5Q9BS91 424 aa4.13□□□□□ -1.75
LSM5-206ENST00000409987 OCR1Q9BZK8 76 aa4.13□□□□□ -1.75
LSM5-206ENST00000409987 RACGAP1Q9H0H5 632 aa4.13□□□□□ -1.75
LSM5-206ENST00000409987 OR2AG1Q9H205 316 aa4.13□□□□□ -1.75
LSM5-206ENST00000409987 PARVGQ9HBI0 331 aa4.13□□□□□ -1.75
LSM5-206ENST00000409987 MYOZ2Q9NPC6 264 aa4.13□□□□□ -1.75
LSM5-206ENST00000409987 CUTCQ9NTM9 273 aa4.13□□□□□ -1.75
LSM5-206ENST00000409987 CTSZQ9UBR2 303 aa4.13□□□□□ -1.75
LSM5-206ENST00000409987 CLN8Q9UBY8 286 aa4.13□□□□□ -1.75
LSM5-206ENST00000409987 MUTYHQ9UIF7 546 aa4.13□□□□□ -1.75
LSM5-206ENST00000409987 PDE10AQ9Y233 779 aa4.13□□□□□ -1.75
LSM5-206ENST00000409987 V9GYY5 206 aaPredicted RBP4.13□□□□□ -1.75
LSM5-206ENST00000409987 BIVM-ERCC5R4GMW8 1640 aa4.13□□□□□ -1.75
LSM5-206ENST00000409987 CDK12Q9NYV4 1490 aaPredicted RBP4.12□□□□□ -1.75
LSM5-206ENST00000409987 KIF26BQ2KJY2 2108 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 KCNE1BA0A087WTH5 132 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 PDHXO00330 501 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 PFKFB2O60825 505 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 UGT2B17O75795 530 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 HPP00738 406 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 RNF224P0DH78 156 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 OXTRP30559 389 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 IFNA8P32881 189 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 DEKP35659 375 aaKnown RBP4.12□□□□□ -1.75
LSM5-206ENST00000409987 SPAM1P38567 509 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 OPRD1P41143 372 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 ETV5P41161 510 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 IST1P53990 364 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 HMGCS2P54868 508 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 RAD51Q06609 339 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 CD300CQ08708 224 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 ELAVL2Q12926 359 aaKnown RBP4.12□□□□□ -1.75
LSM5-206ENST00000409987 RCAN2Q14206 197 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 FCN2Q15485 313 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 ISXQ2M1V0 245 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 HSDL1Q3SXM5 330 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 XKR4Q5GH76 650 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 PVRIGQ6DKI7 326 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 C22orf42Q6IC83 251 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 FAAP20Q6NZ36 180 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 APOOLQ6UXV4 268 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 SLC16A14Q7RTX9 510 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 SLC47A2Q86VL8 602 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 CCDC65Q8IXS2 484 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 ST13P4Q8IZP2 240 aaPredicted RBP4.12□□□□□ -1.75
LSM5-206ENST00000409987 OR2L13Q8N349 312 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 ATP6V0D2Q8N8Y2 350 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 TMEM104Q8NE00 496 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 NPRL2Q8WTW4 380 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 IL1F10Q8WWZ1 152 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 ZNF689Q96CS4 500 aaPredicted RBP4.12□□□□□ -1.75
LSM5-206ENST00000409987 ARL5BQ96KC2 179 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 ZNF597Q96LX8 424 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 TRIM51Q9BSJ1 452 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 CABLES2Q9BTV7 478 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 GFRA4Q9GZZ7 299 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 RANBP3Q9H6Z4 567 aaPredicted RBP4.12□□□□□ -1.75
LSM5-206ENST00000409987 UGT1A10Q9HAW8 530 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 ADAP2Q9NPF8 381 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 DYRK4Q9NR20 520 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 NANSQ9NR45 359 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 NUDT15Q9NV35 164 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 GPATCH2LQ9NWQ4 482 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 CD300AQ9UGN4 299 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 PHF11Q9UIL8 331 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 BARX2Q9UMQ3 279 aaPredicted RBP4.12□□□□□ -1.75
LSM5-206ENST00000409987 FBXO7Q9Y3I1 522 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 USP16Q9Y5T5 823 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 CNTLNQ9NXG0 1405 aa4.12□□□□□ -1.75
LSM5-206ENST00000409987 NEURL4Q96JN8 1562 aa4.11□□□□□ -1.75
LSM5-206ENST00000409987 SETBP1Q9Y6X0 1596 aa4.11□□□□□ -1.75
LSM5-206ENST00000409987 HECW1Q76N89 1606 aa4.11□□□□□ -1.75
LSM5-206ENST00000409987 GSTTP1A0A1W2PQM5 241 aa4.11□□□□□ -1.75
LSM5-206ENST00000409987 KRTAP16-1A8MUX0 517 aa4.11□□□□□ -1.75
LSM5-206ENST00000409987 TYROBPO43914 113 aa4.11□□□□□ -1.75
LSM5-206ENST00000409987 CHST1O43916 411 aa4.11□□□□□ -1.75
LSM5-206ENST00000409987 CXCL13O43927 109 aa4.11□□□□□ -1.75
LSM5-206ENST00000409987 HUS1O60921 280 aa4.11□□□□□ -1.75
LSM5-206ENST00000409987 NUDT14O95848 222 aa4.11□□□□□ -1.75
LSM5-206ENST00000409987 ZNF853P0CG23 659 aa4.11□□□□□ -1.75
LSM5-206ENST00000409987 UBCP0CG48 685 aaKnown RBP4.11□□□□□ -1.75
LSM5-206ENST00000409987 MYL2P10916 166 aa4.11□□□□□ -1.75
LSM5-206ENST00000409987 SDC1P18827 310 aa4.11□□□□□ -1.75
LSM5-206ENST00000409987 POLR2EP19388 210 aaKnown RBP4.11□□□□□ -1.75
LSM5-206ENST00000409987 CCNOP22674 350 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms