RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 IRGMA1A4Y4 181 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 C2orf72A6NCS6 295 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 SNTNA6NMZ2 147 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 MCIDASD6RGH6 385 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 FTCDNL1E5RQL4 147 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 SLC30A4O14863 429 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 SNPHO15079 494 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 INMTO95050 263 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 SLC2A10O95528 541 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 PPP1R3DO95685 299 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 FADS2O95864 444 aaKnown RBP4.99□□□□□ -1.61
EPHA4-202ENST00000409854 TXNDC12O95881 172 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 CCL3P10147 92 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 HTR1FP30939 366 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 S100A12P80511 92 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 RAB40BQ12829 278 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 FOXF1Q12946 379 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 CNPY1Q3B7I2 92 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 NIPAL3Q6P499 406 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 ARSKQ6UWY0 536 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 IL20RBQ6UXL0 311 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 B3GNT6Q6ZMB0 384 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 FAM122BQ7Z309 247 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 MARCH9Q86YJ5 346 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 GID4Q8IVV7 300 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 STX19Q8N4C7 294 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 POC1BQ8TC44 478 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 RFKQ969G6 155 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 C1GALT1C1Q96EU7 318 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 CRELD1Q96HD1 420 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 SGCZQ96LD1 299 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 DDOQ99489 341 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 NPAS1Q99742 590 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 CCDC90BQ9GZT6 254 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 NANSQ9NR45 359 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 DLL3Q9NYJ7 618 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 IL17BQ9UHF5 180 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 KLHL21Q9UJP4 597 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.99□□□□□ -1.61
EPHA4-202ENST00000409854 DIMT1Q9UNQ2 313 aaKnown RBP4.99□□□□□ -1.61
EPHA4-202ENST00000409854 EXOGQ9Y2C4 368 aaKnown RBP4.99□□□□□ -1.61
EPHA4-202ENST00000409854 LSM2Q9Y333 95 aaKnown RBP4.99□□□□□ -1.61
EPHA4-202ENST00000409854 A0A087WZY1 265 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 ZC3H12DA2A288 527 aaKnown RBP4.99□□□□□ -1.61
EPHA4-202ENST00000409854 J3QRE1 110 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 CDK2AP1O14519 115 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 IMPA2O14732 288 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 GMFGO60234 142 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 ADORA3P0DMS8 318 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 LIPCP11150 499 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 HK1P19367 917 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 ADH6P28332 368 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 RBMS1P29558 406 aaKnown RBP4.99□□□□□ -1.61
EPHA4-202ENST00000409854 ZNF41P51814 821 aaPredicted RBP4.99□□□□□ -1.61
EPHA4-202ENST00000409854 MLLT10P55197 1068 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 RELQ04864 619 aaPredicted RBP4.99□□□□□ -1.61
EPHA4-202ENST00000409854 ANKRD39Q53RE8 183 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 DCAF10Q5QP82 559 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 ARMC4Q5T2S8 1044 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 FAM69AQ5T7M9 428 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 ZNF468Q5VIY5 522 aaPredicted RBP4.99□□□□□ -1.61
EPHA4-202ENST00000409854 C1orf140Q5VVS0 124 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 SLC22A10Q63ZE4 541 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 OR5M10Q6IEU7 315 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 CXXC5Q7LFL8 322 aaKnown RBP4.99□□□□□ -1.61
EPHA4-202ENST00000409854 ZNF227Q86WZ6 799 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 OR52I1Q8NGK6 324 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 KISS1RQ969F8 398 aaPredicted RBP4.99□□□□□ -1.61
EPHA4-202ENST00000409854 LGALS12Q96DT0 336 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 YIPF6Q96EC8 236 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 TMEM80Q96HE8 168 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 PLEKHA8Q96JA3 519 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 HPF1Q9NWY4 346 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 EMC3Q9P0I2 261 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 RSL24D1Q9UHA3 163 aaKnown RBP4.99□□□□□ -1.61
EPHA4-202ENST00000409854 CCDC182A6NF36 153 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 TRIM3O75382 744 aaPredicted RBP4.99□□□□□ -1.61
EPHA4-202ENST00000409854 SLC25A12O75746 678 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 RAB36O95755 333 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 ECDO95905 644 aaPredicted RBP4.99□□□□□ -1.61
EPHA4-202ENST00000409854 PAHP00439 452 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 RPS5P46782 204 aaKnown RBP4.99□□□□□ -1.61
EPHA4-202ENST00000409854 MTNR1AP48039 350 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 NOVA1P51513 510 aaKnown RBP4.99□□□□□ -1.61
EPHA4-202ENST00000409854 TMBIM6P55061 237 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 CDH11P55287 796 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 AIMP2Q13155 320 aaKnown RBP4.99□□□□□ -1.61
EPHA4-202ENST00000409854 RTP5Q14D33 572 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 SGCBQ16585 318 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 KLHL22Q53GT1 634 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 ACER2Q5QJU3 275 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 ZNF367Q7RTV3 350 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 PLCZ1Q86YW0 608 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 CPOQ8IVL8 374 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 TMEM156Q8N614 296 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 BBS1Q8NFJ9 593 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 MOSPD2Q8NHP6 518 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 RORBQ92753 470 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 ZBTB8AQ96BR9 441 aa4.99□□□□□ -1.61
EPHA4-202ENST00000409854 ISOC1Q96CN7 298 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms