RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 RUNDC3AQ59EK9 446 aa12.79□□□□□ -0.36
NIF3L1-205ENST00000409588 RPS26P11Q5JNZ5 115 aaPredicted RBP12.79□□□□□ -0.36
NIF3L1-205ENST00000409588 PAGE3Q5JUK9 113 aa12.79□□□□□ -0.36
NIF3L1-205ENST00000409588 DLEU7Q6UYE1 221 aa12.79□□□□□ -0.36
NIF3L1-205ENST00000409588 MSRB3Q8IXL7 192 aa12.79□□□□□ -0.36
NIF3L1-205ENST00000409588 ZIC4Q8N9L1 334 aa12.79□□□□□ -0.36
NIF3L1-205ENST00000409588 ELOA3Q8NG57 546 aa12.79□□□□□ -0.36
NIF3L1-205ENST00000409588 OR6S1Q8NH40 331 aa12.79□□□□□ -0.36
NIF3L1-205ENST00000409588 COX4I2Q96KJ9 171 aa12.79□□□□□ -0.36
NIF3L1-205ENST00000409588 Q96MF0 132 aa12.79□□□□□ -0.36
NIF3L1-205ENST00000409588 SLCO5A1Q9H2Y9 848 aa12.79□□□□□ -0.36
NIF3L1-205ENST00000409588 ALG2Q9H553 416 aa12.79□□□□□ -0.36
NIF3L1-205ENST00000409588 SELENONQ9NZV5 590 aa12.79□□□□□ -0.36
NIF3L1-205ENST00000409588 SLAMF8Q9P0V8 285 aa12.79□□□□□ -0.36
NIF3L1-205ENST00000409588 SLC13A4Q9UKG4 626 aa12.79□□□□□ -0.36
NIF3L1-205ENST00000409588 B3GALT5Q9Y2C3 310 aa12.79□□□□□ -0.36
NIF3L1-205ENST00000409588 ROS1P08922 2347 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 ANGPT2O15123 496 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 EDF1O60869 148 aaKnown RBP12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 RAMP1O60894 148 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 FZD7O75084 574 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 RAD51DO75771 328 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 KRT33AO76009 404 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 NPPAP01160 153 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 IGHV3-9P01782 118 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 C8BP07358 591 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 VIMP08670 466 aaKnown RBP12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 BMP4P12644 408 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 GTF2E2P29084 291 aaKnown RBP12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 SCARB2Q14108 478 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 TSPO2Q5TGU0 170 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 AGAP6Q5VW22 663 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 CLEC9AQ6UXN8 241 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 CREB3L2Q70SY1 520 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 GPAT4Q86UL3 456 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 C11orf65Q8NCR3 313 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 HIPK4Q8NE63 616 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 NFKBIDQ8NI38 313 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 SLC38A4Q969I6 547 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 SLC47A1Q96FL8 570 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 EPYCQ99645 322 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 SH3GL1Q99961 368 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 LINC00470Q9BZP3 86 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 TMEM27Q9HBJ8 222 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 BARX1Q9HBU1 254 aaPredicted RBP12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 SLC7A10Q9NS82 523 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 ADPRHL2Q9NX46 363 aa12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 TESQ9UGI8 421 aaKnown RBP12.78□□□□□ -0.36
NIF3L1-205ENST00000409588 FTCDNL1E5RQL4 147 aa12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 ABCD4O14678 606 aa12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 FRS3O43559 492 aa12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 FMO6PO60774 539 aa12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 HEXAP06865 529 aa12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 ITGA5P08648 1049 aa12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 ZNF43P17038 809 aa12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 CD40P25942 277 aa12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 P2RY4P51582 365 aa12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 BNIP2Q12982 314 aa12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 ADRM1Q16186 407 aa12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 ALG10BQ5I7T1 473 aa12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 FAM69AQ5T7M9 428 aa12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 LCE2AQ5TA79 106 aaPredicted RBP12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 KLHL24Q6TFL4 600 aa12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 DTX2Q86UW9 622 aa12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 ARMC8Q8IUR7 673 aa12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 OR52E4Q8NGH9 312 aa12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 OR52N5Q8NH56 324 aa12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 RASSF5Q8WWW0 418 aa12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 ANKRD27Q96NW4 1050 aa12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 OXGR1Q96P68 337 aa12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 FKRPQ9H9S5 495 aa12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 SLC17A5Q9NRA2 495 aa12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 RCE1Q9Y256 329 aa12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 ANGPT4Q9Y264 503 aa12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 CORINQ9Y5Q5 1042 aa12.77□□□□□ -0.37
NIF3L1-205ENST00000409588 TRAV36DV7A0A075B6V5 113 aa12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 SHISA9B4DS77 424 aa12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 ZNF587BE7ETH6 402 aa12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 AIM2O14862 343 aa12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 SOD3P08294 240 aa12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 SH3BGRP55822 239 aaPredicted RBP12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 NCALDP61601 193 aa12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 EGR4Q05215 589 aa12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 NRF1Q16656 503 aa12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 PGGHGQ32M88 737 aa12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 C3orf36Q3SXR2 165 aa12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 INTS11Q5TA45 600 aaKnown RBP12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 ZNF544Q6NX49 715 aa12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 SLC22A25Q6T423 547 aa12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 TREML4Q6UXN2 200 aa12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 H1FNTQ75WM6 255 aaPredicted RBP12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 RANBP3LQ86VV4 465 aaPredicted RBP12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 CCDC36Q8IYA8 594 aa12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 WDR31Q8NA23 367 aa12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 ADPRHL1Q8NDY3 354 aa12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 MAGEE2Q8TD90 523 aaPredicted RBP12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 DNAJA3Q96EY1 480 aa12.76□□□□□ -0.37
NIF3L1-205ENST00000409588 POM121Q96HA1 1249 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms