RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 IFNA8P32881 189 aa17.61■□□□□ 0.41
PDLIM2-207ENST00000409417 UGT2B10P36537 528 aa17.61■□□□□ 0.41
PDLIM2-207ENST00000409417 EXOC3L2Q2M3D2 409 aa17.61■□□□□ 0.41
PDLIM2-207ENST00000409417 TTC33Q6PID6 262 aaPredicted RBP17.61■□□□□ 0.41
PDLIM2-207ENST00000409417 OR9K2Q8NGE7 335 aa17.61■□□□□ 0.41
PDLIM2-207ENST00000409417 PRRC1Q96M27 445 aa17.61■□□□□ 0.41
PDLIM2-207ENST00000409417 PRSS27Q9BQR3 290 aa17.61■□□□□ 0.41
PDLIM2-207ENST00000409417 FANCFQ9NPI8 374 aa17.61■□□□□ 0.41
PDLIM2-207ENST00000409417 RASD1Q9Y272 281 aa17.61■□□□□ 0.41
PDLIM2-207ENST00000409417 NOSIPQ9Y314 301 aaKnown RBP17.61■□□□□ 0.41
PDLIM2-207ENST00000409417 FLVCR1Q9Y5Y0 555 aa17.61■□□□□ 0.41
PDLIM2-207ENST00000409417 C16orf97H3BN30 126 aa17.6■□□□□ 0.41
PDLIM2-207ENST00000409417 M0R082 166 aa17.6■□□□□ 0.41
PDLIM2-207ENST00000409417 MT-ATP6P00846 226 aa17.6■□□□□ 0.41
PDLIM2-207ENST00000409417 BGLAPP02818 100 aa17.6■□□□□ 0.41
PDLIM2-207ENST00000409417 PTNP21246 168 aa17.6■□□□□ 0.41
PDLIM2-207ENST00000409417 GRPRP30550 384 aa17.6■□□□□ 0.41
PDLIM2-207ENST00000409417 RBM34P42696 430 aaKnown RBP17.6■□□□□ 0.41
PDLIM2-207ENST00000409417 H1FNTQ75WM6 255 aaPredicted RBP17.6■□□□□ 0.41
PDLIM2-207ENST00000409417 GPAT4Q86UL3 456 aa17.6■□□□□ 0.41
PDLIM2-207ENST00000409417 ZNF100Q8IYN0 542 aa17.6■□□□□ 0.41
PDLIM2-207ENST00000409417 ZNF295-AS1Q8N0V1 137 aa17.6■□□□□ 0.41
PDLIM2-207ENST00000409417 ZNF417Q8TAU3 575 aa17.6■□□□□ 0.41
PDLIM2-207ENST00000409417 ZNF587Q96SQ5 575 aaPredicted RBP17.6■□□□□ 0.41
PDLIM2-207ENST00000409417 PARPBPQ9NWS1 579 aa17.6■□□□□ 0.41
PDLIM2-207ENST00000409417 CRIM1Q9NZV1 1036 aa17.6■□□□□ 0.41
PDLIM2-207ENST00000409417 C6orf203Q9P0P8 240 aaPredicted RBP17.6■□□□□ 0.41
PDLIM2-207ENST00000409417 PRPF19Q9UMS4 504 aaKnown RBP17.6■□□□□ 0.41
PDLIM2-207ENST00000409417 A4GNTQ9UNA3 340 aa17.6■□□□□ 0.41
PDLIM2-207ENST00000409417 FREM1Q5H8C1 2179 aa17.6■□□□□ 0.41
PDLIM2-207ENST00000409417 MRPL33O75394 65 aaKnown RBP17.59■□□□□ 0.41
PDLIM2-207ENST00000409417 CNOT4O95628 575 aaKnown RBP17.59■□□□□ 0.41
PDLIM2-207ENST00000409417 NTF4P34130 210 aa17.59■□□□□ 0.41
PDLIM2-207ENST00000409417 LTBQ06643 244 aa17.59■□□□□ 0.41
PDLIM2-207ENST00000409417 ST3GAL3Q11203 375 aa17.59■□□□□ 0.41
PDLIM2-207ENST00000409417 POU4F3Q15319 338 aa17.59■□□□□ 0.41
PDLIM2-207ENST00000409417 NKAIN4Q8IVV8 208 aa17.59■□□□□ 0.41
PDLIM2-207ENST00000409417 GABRG1Q8N1C3 465 aa17.59■□□□□ 0.41
PDLIM2-207ENST00000409417 C10orf53Q8N6V4 93 aa17.59■□□□□ 0.41
PDLIM2-207ENST00000409417 ZIC4Q8N9L1 334 aa17.59■□□□□ 0.41
PDLIM2-207ENST00000409417 SCAIQ8N9R8 606 aa17.59■□□□□ 0.41
PDLIM2-207ENST00000409417 ADPRHL1Q8NDY3 354 aa17.59■□□□□ 0.41
PDLIM2-207ENST00000409417 FAM222BQ8WU58 562 aa17.59■□□□□ 0.41
PDLIM2-207ENST00000409417 NSMCE2Q96MF7 247 aa17.59■□□□□ 0.41
PDLIM2-207ENST00000409417 MOGAT1Q96PD6 335 aa17.59■□□□□ 0.41
PDLIM2-207ENST00000409417 SEC14L4Q9UDX3 406 aa17.59■□□□□ 0.41
PDLIM2-207ENST00000409417 FFAR1O14842 300 aa17.58■□□□□ 0.41
PDLIM2-207ENST00000409417 EDNRAP25101 427 aa17.58■□□□□ 0.41
PDLIM2-207ENST00000409417 YAP1P46937 504 aaKnown RBP17.58■□□□□ 0.41
PDLIM2-207ENST00000409417 P2RY6Q15077 328 aa17.58■□□□□ 0.41
PDLIM2-207ENST00000409417 STAC2Q6ZMT1 411 aa17.58■□□□□ 0.41
PDLIM2-207ENST00000409417 Q6ZT83 130 aa17.58■□□□□ 0.41
PDLIM2-207ENST00000409417 FAM86B1Q8N7N1 296 aa17.58■□□□□ 0.41
PDLIM2-207ENST00000409417 LINC01560Q8TB33 94 aa17.58■□□□□ 0.41
PDLIM2-207ENST00000409417 TMEM45BQ96B21 275 aa17.58■□□□□ 0.41
PDLIM2-207ENST00000409417 APH1AQ96BI3 265 aa17.58■□□□□ 0.41
PDLIM2-207ENST00000409417 HS6ST2Q96MM7 605 aa17.58■□□□□ 0.41
PDLIM2-207ENST00000409417 FNDC11Q9BVV2 318 aa17.58■□□□□ 0.41
PDLIM2-207ENST00000409417 ASPNQ9BXN1 380 aa17.58■□□□□ 0.41
PDLIM2-207ENST00000409417 KLHL4Q9C0H6 718 aa17.58■□□□□ 0.41
PDLIM2-207ENST00000409417 ACTR3BQ9P1U1 418 aa17.58■□□□□ 0.41
PDLIM2-207ENST00000409417 NDRG3Q9UGV2 375 aa17.58■□□□□ 0.41
PDLIM2-207ENST00000409417 ENPP4Q9Y6X5 453 aa17.58■□□□□ 0.41
PDLIM2-207ENST00000409417 LOC102725191A0A1B0GVB3 256 aa17.57■□□□□ 0.4
PDLIM2-207ENST00000409417 KPNA4O00629 521 aaPredicted RBP17.57■□□□□ 0.4
PDLIM2-207ENST00000409417 PRF1P14222 555 aa17.57■□□□□ 0.4
PDLIM2-207ENST00000409417 CBLP22681 906 aa17.57■□□□□ 0.4
PDLIM2-207ENST00000409417 CCKARP32238 428 aa17.57■□□□□ 0.4
PDLIM2-207ENST00000409417 ZNF74Q16587 644 aa17.57■□□□□ 0.4
PDLIM2-207ENST00000409417 CREB3L2Q70SY1 520 aa17.57■□□□□ 0.4
PDLIM2-207ENST00000409417 TSEN54Q7Z6J9 526 aaKnown RBP17.57■□□□□ 0.4
PDLIM2-207ENST00000409417 OFCC1Q8IZS5 231 aa17.57■□□□□ 0.4
PDLIM2-207ENST00000409417 TMEM255BQ8WV15 326 aa17.57■□□□□ 0.4
PDLIM2-207ENST00000409417 TMEM239Q8WW34 195 aa17.57■□□□□ 0.4
PDLIM2-207ENST00000409417 C14orf79Q96F83 325 aa17.57■□□□□ 0.4
PDLIM2-207ENST00000409417 PYURFQ96I23 114 aa17.57■□□□□ 0.4
PDLIM2-207ENST00000409417 DACH2Q96NX9 599 aa17.57■□□□□ 0.4
PDLIM2-207ENST00000409417 OXGR1Q96P68 337 aa17.57■□□□□ 0.4
PDLIM2-207ENST00000409417 MUC13Q9H3R2 512 aa17.57■□□□□ 0.4
PDLIM2-207ENST00000409417 MEPEQ9NQ76 525 aaPredicted RBP17.57■□□□□ 0.4
PDLIM2-207ENST00000409417 MRPL39Q9NYK5 338 aaKnown RBP17.57■□□□□ 0.4
PDLIM2-207ENST00000409417 NDUFAF4Q9P032 175 aa17.57■□□□□ 0.4
PDLIM2-207ENST00000409417 B3GAT1Q9P2W7 334 aa17.57■□□□□ 0.4
PDLIM2-207ENST00000409417 CACNA1DQ01668 2161 aa17.57■□□□□ 0.4
PDLIM2-207ENST00000409417 APCP25054 2843 aa17.57■□□□□ 0.4
PDLIM2-207ENST00000409417 LRRN3E7EW58 273 aa17.56■□□□□ 0.4
PDLIM2-207ENST00000409417 J3KTA2 159 aa17.56■□□□□ 0.4
PDLIM2-207ENST00000409417 CH25HO95992 272 aa17.56■□□□□ 0.4
PDLIM2-207ENST00000409417 IGF2P01344 180 aa17.56■□□□□ 0.4
PDLIM2-207ENST00000409417 MT-ND1P03886 318 aa17.56■□□□□ 0.4
PDLIM2-207ENST00000409417 EPXP11678 715 aa17.56■□□□□ 0.4
PDLIM2-207ENST00000409417 PSMB1P20618 241 aaKnown RBP17.56■□□□□ 0.4
PDLIM2-207ENST00000409417 SSTR2P30874 369 aa17.56■□□□□ 0.4
PDLIM2-207ENST00000409417 TRIM25Q14258 630 aaKnown RBP17.56■□□□□ 0.4
PDLIM2-207ENST00000409417 FBXW9Q5XUX1 488 aa17.56■□□□□ 0.4
PDLIM2-207ENST00000409417 CYP4Z1Q86W10 505 aa17.56■□□□□ 0.4
PDLIM2-207ENST00000409417 EPHX4Q8IUS5 362 aa17.56■□□□□ 0.4
PDLIM2-207ENST00000409417 KDM8Q8N371 416 aa17.56■□□□□ 0.4
PDLIM2-207ENST00000409417 C7orf34Q96L11 122 aa17.56■□□□□ 0.4
PDLIM2-207ENST00000409417 ZNF385AQ96PM9 386 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms