RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 IGSF11Q5DX21 431 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 TMEM81Q6P7N7 255 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 MDGA2Q7Z553 956 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 RBM45Q8IUH3 476 aaKnown RBP16.41■□□□□ 0.22
SMPD4-202ENST00000409031 LFNGQ8NES3 379 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 OR4K15Q8NH41 348 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 BMFQ96LC9 184 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 TGM7Q96PF1 710 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 SERINC2Q96SA4 455 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 DNAJC25-GNG10A0A024R161 153 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 SERPINA5P05154 406 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 MEOX2P50222 304 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 PFN3P60673 137 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 HYAL4Q2M3T9 481 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 RTL6Q6ICC9 239 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 NAXEQ8NCW5 288 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 OR51D1Q8NGF3 324 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 NICN1Q9BSH3 213 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 NELFAQ9H3P2 528 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 IGFLR1Q9H665 355 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 ELOVL3Q9HB03 270 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 SPATA6Q9NWH7 488 aaPredicted RBP16.41■□□□□ 0.22
SMPD4-202ENST00000409031 B3GALT1Q9Y5Z6 326 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 SLC22A7Q9Y694 548 aa16.41■□□□□ 0.22
SMPD4-202ENST00000409031 UBR2Q8IWV8 1755 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 HHLA1C9JL84 531 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 B3GALT4O96024 378 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 IL5P05113 134 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 SPOCK1Q08629 439 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 ELAVL3Q14576 367 aaKnown RBP16.4■□□□□ 0.22
SMPD4-202ENST00000409031 SSX1Q16384 188 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 C3orf33Q6P1S2 294 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 C8orf82Q6P1X6 216 aaPredicted RBP16.4■□□□□ 0.22
SMPD4-202ENST00000409031 HSD11B1LQ7Z5J1 315 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 SKA3Q8IX90 412 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 FAM71CQ8NEG0 241 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 OR5T1Q8NG75 326 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 BRI3BPQ8WY22 251 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 ALG12Q9BV10 488 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 SIRT5Q9NXA8 310 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 TMEM72A0PK05 275 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 PLGP00747 810 aaPredicted RBP16.4■□□□□ 0.22
SMPD4-202ENST00000409031 PRAMEF8Q5VWM4 474 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 PRAMEF7Q5VXH5 474 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 TMEM225Q6GV28 225 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 BEND4Q6ZU67 534 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 P4HA3Q7Z4N8 544 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 DVL3Q92997 716 aaPredicted RBP16.4■□□□□ 0.22
SMPD4-202ENST00000409031 LMF2Q9BU23 707 aaKnown RBP16.4■□□□□ 0.22
SMPD4-202ENST00000409031 POFUT1Q9H488 388 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 HINT3Q9NQE9 182 aaKnown RBP16.4■□□□□ 0.22
SMPD4-202ENST00000409031 SURF4O15260 269 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 TAS2R46P59540 309 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 NUMA1Q14980 2115 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 MRPL2Q5T653 305 aaKnown RBP16.4■□□□□ 0.22
SMPD4-202ENST00000409031 GDF7Q7Z4P5 450 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 HSD17B13Q7Z5P4 300 aaPredicted RBP16.4■□□□□ 0.22
SMPD4-202ENST00000409031 ZNF695Q8IW36 515 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 UPRTQ96BW1 309 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 TNFRSF13CQ96RJ3 184 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 ZNF442Q9H7R0 627 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 BET1O15155 118 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 CD80P33681 288 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 PTGER1P34995 402 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 RAB13P51153 203 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 BAP18Q8IXM2 172 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 OR1J2Q8NGS2 313 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 TMED6Q8WW62 240 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 FAM3DQ96BQ1 224 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 RRNAD1Q96FB5 475 aaKnown RBP16.4■□□□□ 0.22
SMPD4-202ENST00000409031 TMEM121BQ9BXQ6 578 aaPredicted RBP16.4■□□□□ 0.22
SMPD4-202ENST00000409031 FZD3Q9NPG1 666 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 DLL4Q9NR61 685 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 C1orf123Q9NWV4 160 aa16.4■□□□□ 0.22
SMPD4-202ENST00000409031 KCNJ13O60928 360 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 CTBSQ01459 385 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 KIAA0907Q7Z7F0 614 aaPredicted RBP16.39■□□□□ 0.21
SMPD4-202ENST00000409031 DPPA2Q7Z7J5 298 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 LILRB2Q8N423 598 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 FAM213BQ8TBF2 198 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 GIMAP5Q96F15 307 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 NMNAT2Q9BZQ4 307 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 MCOLN1Q9GZU1 580 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 M0QYG6 137 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 TMEM127O75204 238 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 ALKBH1Q13686 389 aaKnown RBP16.39■□□□□ 0.21
SMPD4-202ENST00000409031 NFATC4Q14934 902 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 RTP2Q5QGT7 225 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 CORO6Q6QEF8 472 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 MCEMP1Q8IX19 187 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 HRASLS2Q9NWW9 162 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 NPIPA5A0A0B4J1W7 369 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 LOC100289279A0A1B0GTE1 492 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 NPIPA7E9PJI5 369 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 SIGLEC6O43699 453 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 SCGB1D1O95968 90 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 NPIPA8P0DM63 369 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 ZNF41P51814 821 aaPredicted RBP16.39■□□□□ 0.21
SMPD4-202ENST00000409031 TMPRSS9Q7Z410 1059 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 SMG9Q9H0W8 520 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms