RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 CHRDQ9H2X0 955 aa11.77□□□□□ -0.52
HERC3-203ENST00000407637 PRDM13Q9H4Q3 707 aa11.77□□□□□ -0.52
HERC3-203ENST00000407637 SEC61A2Q9H9S3 476 aa11.77□□□□□ -0.52
HERC3-203ENST00000407637 PPP1R14DQ9NXH3 145 aa11.77□□□□□ -0.52
HERC3-203ENST00000407637 KLHL42Q9P2K6 505 aa11.77□□□□□ -0.52
HERC3-203ENST00000407637 ICKQ9UPZ9 632 aa11.77□□□□□ -0.52
HERC3-203ENST00000407637 GPR55Q9Y2T6 319 aaPredicted RBP11.77□□□□□ -0.52
HERC3-203ENST00000407637 NUP210Q8TEM1 1887 aaPredicted RBP11.77□□□□□ -0.53
HERC3-203ENST00000407637 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.77□□□□□ -0.53
HERC3-203ENST00000407637 MBLAC1A4D2B0 266 aaPredicted RBP11.77□□□□□ -0.53
HERC3-203ENST00000407637 YIF1AO95070 293 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 POP4O95707 220 aaKnown RBP11.77□□□□□ -0.53
HERC3-203ENST00000407637 SLC16A8O95907 504 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 CHRM4P08173 479 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 COX5BP10606 129 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 FUT1P19526 365 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 ACKR3P25106 362 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 MAGEB1P43366 347 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 CSNK1EP49674 416 aaKnown RBP11.77□□□□□ -0.53
HERC3-203ENST00000407637 RPS11P62280 158 aaKnown RBP eCLIP11.77□□□□□ -0.53
HERC3-203ENST00000407637 RNF4P78317 190 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 ZNF177Q13360 481 aaPredicted RBP11.77□□□□□ -0.53
HERC3-203ENST00000407637 CDKN3Q16667 212 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 PRRT3Q5FWE3 981 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 C9orf131Q5VYM1 1079 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 OR10K2Q6IF99 312 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 TMED4Q7Z7H5 227 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 GLB1L2Q8IW92 636 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 RNASE11Q8TAA1 199 aaKnown RBP11.77□□□□□ -0.53
HERC3-203ENST00000407637 BRI3BPQ8WY22 251 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 OR5P2Q8WZ92 322 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 SMPDL3AQ92484 453 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 HSPA12BQ96MM6 686 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 NECAB3Q96P71 396 aaPredicted RBP11.77□□□□□ -0.53
HERC3-203ENST00000407637 HRH4Q9H3N8 390 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 SYNPO2LQ9H987 977 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 RHOFQ9HBH0 211 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 NOX4Q9NPH5 578 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 RPS10P5Q9NQ39 176 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 COMMD9Q9P000 198 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 PPP4R1LQ9P1A2 415 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 RBPJLQ9UBG7 517 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 OR5V1Q9UGF6 321 aa11.77□□□□□ -0.53
HERC3-203ENST00000407637 ACOD1A6NK06 481 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 K7ERQ8 282 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 CLTBP09497 229 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 ZGLP1P0C6A0 271 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 IMPA1P29218 277 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 PDHA2P29803 388 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 PPP2R1BP30154 601 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 TRHRP34981 398 aaPredicted RBP11.76□□□□□ -0.53
HERC3-203ENST00000407637 RAB5CP51148 216 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 CRYBB1P53674 252 aaPredicted RBP11.76□□□□□ -0.53
HERC3-203ENST00000407637 INPP5JQ15735 1006 aaPredicted RBP11.76□□□□□ -0.53
HERC3-203ENST00000407637 MST1LQ2TV78 715 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 NKAPLQ5M9Q1 402 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 YOD1Q5VVQ6 348 aaPredicted RBP11.76□□□□□ -0.53
HERC3-203ENST00000407637 CRTC1Q6UUV9 634 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 OR5M8Q8NGP6 311 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 PPP1R1CQ8WVI7 109 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 DIO2Q92813 273 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 RAB3CQ96E17 227 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 PDCD1LG2Q9BQ51 273 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 OCSTAMPQ9BR26 566 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 ADGRL4Q9HBW9 690 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 INPP5EQ9NRR6 644 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 GFOD1Q9NXC2 390 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 FBXO4Q9UKT5 387 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 PRICKLE3O43900 615 aaPredicted RBP11.76□□□□□ -0.53
HERC3-203ENST00000407637 FGF19O95750 216 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 FGBP02675 491 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 OR4E1P0C645 316 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 SLC25A4P12235 298 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 PTGER1P34995 402 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 ZNF280AP59817 542 aaPredicted RBP11.76□□□□□ -0.53
HERC3-203ENST00000407637 ILF3Q12906 894 aaKnown RBP eCLIP11.76□□□□□ -0.53
HERC3-203ENST00000407637 CDK5R1Q15078 307 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 ZNF750Q32MQ0 723 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 SDR9C7Q8NEX9 313 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 OR5AP2Q8NGF4 316 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 TMEM255BQ8WV15 326 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 DVL3Q92997 716 aaPredicted RBP11.76□□□□□ -0.53
HERC3-203ENST00000407637 HAVCR1Q96D42 359 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 SMIM19Q96E16 107 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 SLC35G5Q96KT7 338 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 NEU1Q99519 415 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 TMEM100Q9NV29 134 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 PISDQ9UG56 409 aa11.76□□□□□ -0.53
HERC3-203ENST00000407637 TMEM202A6NGA9 273 aa11.75□□□□□ -0.53
HERC3-203ENST00000407637 NUDT19A8MXV4 375 aa11.75□□□□□ -0.53
HERC3-203ENST00000407637 RBBP9O75884 186 aa11.75□□□□□ -0.53
HERC3-203ENST00000407637 SBK2P0C263 348 aa11.75□□□□□ -0.53
HERC3-203ENST00000407637 GTF2F2P13984 249 aa11.75□□□□□ -0.53
HERC3-203ENST00000407637 IL9P15248 144 aa11.75□□□□□ -0.53
HERC3-203ENST00000407637 SRMP19623 302 aa11.75□□□□□ -0.53
HERC3-203ENST00000407637 RAB5AP20339 215 aa11.75□□□□□ -0.53
HERC3-203ENST00000407637 GUCA2AQ02747 115 aa11.75□□□□□ -0.53
HERC3-203ENST00000407637 PLA2G7Q13093 441 aa11.75□□□□□ -0.53
HERC3-203ENST00000407637 VGLL4Q14135 290 aa11.75□□□□□ -0.53
HERC3-203ENST00000407637 LIN54Q6MZP7 749 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms