RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 PEPDP12955 493 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 HTR2AP28223 471 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 NOS3P29474 1203 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 ADH7P40394 386 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 PSG6Q00889 435 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 IFITM3Q01628 133 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 SCN1BQ07699 218 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 ALG10BQ5I7T1 473 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 NIPAL3Q6P499 406 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 PAMR1Q6UXH9 720 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 OTULINQ96BN8 352 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 SGTBQ96EQ0 304 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 VSTM2LQ96N03 204 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 OR1F2PQ96R84 312 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 OR10A5Q9H207 317 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 RNF167Q9H6Y7 350 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 HINT3Q9NQE9 182 aaKnown RBP11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 BABAM2Q9NXR7 383 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 DNAJB12Q9NXW2 375 aaKnown RBP11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 HCN3Q9P1Z3 774 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 PADI1Q9ULC6 663 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 SIGLEC7Q9Y286 467 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 NTNG1Q9Y2I2 539 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 SF3B6Q9Y3B4 125 aaKnown RBP11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 GRIP1Q9Y3R0 1128 aa11.78□□□□□ -0.52
SMARCB1-203ENST00000407082 CDC14CA4D256 554 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 SERINC4A6NH21 518 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 CDC42EP2O14613 210 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 CASKO14936 926 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 SLC19A2O60779 497 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 NDUFB2O95178 105 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 CLDN1O95832 211 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 SERPINA3P01011 423 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 CSTAP01040 98 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 PNMTP11086 282 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 PRG2P13727 222 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 HPGDP15428 266 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 MAKP20794 623 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 RORAP35398 523 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 DLSTP36957 453 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 SNRPNP63162 240 aaKnown RBP11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 DCDP81605 110 aaKnown RBP11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 LSM11P83369 360 aaKnown RBP eCLIP11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 MRPL49Q13405 166 aaKnown RBP11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 GALEQ14376 348 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 OR2G6Q5TZ20 316 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 STEAP3Q658P3 488 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 C22orf42Q6IC83 251 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 PLBD1Q6P4A8 553 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 PAQR6Q6TCH4 344 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 ZNF322Q6U7Q0 402 aaPredicted RBP11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 LINC00114Q6XXX2 140 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 LHFPL3Q86UP9 236 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 EGFL6Q8IUX8 553 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 OR8H2Q8N162 312 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 ESX1Q8N693 406 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 METTL27Q8N6F8 245 aaPredicted RBP11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 ATP6V1C2Q8NEY4 427 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 OR51Q1Q8NH59 317 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 HAVCR2Q8TDQ0 301 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 CNOT9Q92600 299 aaKnown RBP11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 MR1Q95460 341 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 ZNF426Q9BUY5 554 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 NPAP1Q9NZP6 1156 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 KCNE5Q9UJ90 142 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 CARD8Q9Y2G2 431 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 SLC6A5Q9Y345 797 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 NOX1Q9Y5S8 564 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 MAU2Q9Y6X3 613 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 SCN2AQ99250 2005 aa11.77□□□□□ -0.53
SMARCB1-203ENST00000407082 CELSR2Q9HCU4 2923 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 NPIPB9F8W1W9 429 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 CTDSP2O14595 271 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 RGS9O75916 674 aaPredicted RBP11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 PDGFAP04085 211 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 ACAA2P42765 397 aaKnown RBP11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 PPICP45877 212 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 OR1D4P47884 311 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 SLC6A8P48029 635 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 RFX3P48380 749 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 PRPS1P60891 318 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 RPS7P62081 194 aaKnown RBP11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 HNRNPA0Q13151 305 aaKnown RBP11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 DNASE1L3Q13609 305 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 NKAIN1Q4KMZ8 207 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 SLC35D3Q5M8T2 416 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 FAM199XQ6PEV8 388 aaPredicted RBP11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 NUP54Q7Z3B4 507 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 TPRA1Q86W33 373 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 MS4A15Q8N5U1 240 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 POMGNT2Q8NAT1 580 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 ZNF485Q8NCK3 441 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 OR4F15Q8NGB8 312 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 OR51G2Q8NGK0 314 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 PFN4Q8NHR9 129 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 CHAC2Q8WUX2 184 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 SPRYD4Q8WW59 207 aaPredicted RBP11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 KCTD12Q96CX2 325 aaKnown RBP11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 TEAD3Q99594 435 aa11.76□□□□□ -0.53
SMARCB1-203ENST00000407082 NEURL2Q9BR09 285 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms