RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 VAPAQ9P0L0 249 aa18.48■□□□□ 0.55
RHBDD3-202ENST00000406335 OSGIN1Q9UJX0 560 aa18.48■□□□□ 0.55
RHBDD3-202ENST00000406335 ZNF443Q9Y2A4 671 aaPredicted RBP18.48■□□□□ 0.55
RHBDD3-202ENST00000406335 CHST2Q9Y4C5 530 aa18.48■□□□□ 0.55
RHBDD3-202ENST00000406335 SPIN1Q9Y657 262 aaPredicted RBP18.48■□□□□ 0.55
RHBDD3-202ENST00000406335 TMED7-TICAM2A0A0A6YYA0 188 aa18.47■□□□□ 0.55
RHBDD3-202ENST00000406335 CDHR4A6H8M9 788 aa18.47■□□□□ 0.55
RHBDD3-202ENST00000406335 CFAP73A6NFT4 308 aa18.47■□□□□ 0.55
RHBDD3-202ENST00000406335 GPR171O14626 319 aa18.47■□□□□ 0.55
RHBDD3-202ENST00000406335 TGFAP01135 160 aa18.47■□□□□ 0.55
RHBDD3-202ENST00000406335 NCF2P19878 526 aaPredicted RBP18.47■□□□□ 0.55
RHBDD3-202ENST00000406335 LIN52Q52LA3 116 aa18.47■□□□□ 0.55
RHBDD3-202ENST00000406335 CLIP4Q8N3C7 705 aa18.47■□□□□ 0.55
RHBDD3-202ENST00000406335 RAD21L1Q9H4I0 556 aa18.47■□□□□ 0.55
RHBDD3-202ENST00000406335 ZNF446Q9NWS9 450 aa18.47■□□□□ 0.55
RHBDD3-202ENST00000406335 TMED7Q9Y3B3 224 aa18.47■□□□□ 0.55
RHBDD3-202ENST00000406335 A0A0G2JPF8 293 aa18.46■□□□□ 0.55
RHBDD3-202ENST00000406335 TMEM72A0PK05 275 aa18.46■□□□□ 0.55
RHBDD3-202ENST00000406335 SLC35F4A4IF30 521 aa18.46■□□□□ 0.55
RHBDD3-202ENST00000406335 HNRNPCL2B2RXH8 293 aa18.46■□□□□ 0.55
RHBDD3-202ENST00000406335 HNRNPCL3B7ZW38 293 aa18.46■□□□□ 0.55
RHBDD3-202ENST00000406335 HNRNPCL1O60812 293 aaKnown RBP18.46■□□□□ 0.55
RHBDD3-202ENST00000406335 HNRNPCL4P0DMR1 293 aa18.46■□□□□ 0.55
RHBDD3-202ENST00000406335 BMP2P12643 396 aa18.46■□□□□ 0.55
RHBDD3-202ENST00000406335 TACR3P29371 465 aa18.46■□□□□ 0.55
RHBDD3-202ENST00000406335 ACAA2P42765 397 aaKnown RBP18.46■□□□□ 0.55
RHBDD3-202ENST00000406335 FADDQ13158 208 aa18.46■□□□□ 0.55
RHBDD3-202ENST00000406335 VRK1Q99986 396 aaPredicted RBP18.46■□□□□ 0.55
RHBDD3-202ENST00000406335 IKZF5Q9H5V7 419 aa18.46■□□□□ 0.55
RHBDD3-202ENST00000406335 ZNF385DQ9H6B1 395 aa18.46■□□□□ 0.55
RHBDD3-202ENST00000406335 A4GALTQ9NPC4 353 aa18.46■□□□□ 0.55
RHBDD3-202ENST00000406335 THUMPD1Q9NXG2 353 aaKnown RBP18.46■□□□□ 0.55
RHBDD3-202ENST00000406335 ALPK2Q86TB3 2170 aa18.46■□□□□ 0.55
RHBDD3-202ENST00000406335 TRBV5-3A0A0A0MS03 114 aa18.45■□□□□ 0.54
RHBDD3-202ENST00000406335 TMEM247A6NEH6 219 aa18.45■□□□□ 0.54
RHBDD3-202ENST00000406335 FAAHO00519 579 aa18.45■□□□□ 0.54
RHBDD3-202ENST00000406335 PMS2P2O95744 297 aa18.45■□□□□ 0.54
RHBDD3-202ENST00000406335 PRG2P13727 222 aa18.45■□□□□ 0.54
RHBDD3-202ENST00000406335 SLC1A3P43003 542 aa18.45■□□□□ 0.54
RHBDD3-202ENST00000406335 POLR2HP52434 150 aaKnown RBP18.45■□□□□ 0.54
RHBDD3-202ENST00000406335 PDK3Q15120 406 aa18.45■□□□□ 0.54
RHBDD3-202ENST00000406335 GABRA6Q16445 453 aa18.45■□□□□ 0.54
RHBDD3-202ENST00000406335 KLHL24Q6TFL4 600 aa18.45■□□□□ 0.54
RHBDD3-202ENST00000406335 CASP12Q6UXS9 341 aa18.45■□□□□ 0.54
RHBDD3-202ENST00000406335 ZNF440Q8IYI8 595 aa18.45■□□□□ 0.54
RHBDD3-202ENST00000406335 PIGXQ8TBF5 258 aa18.45■□□□□ 0.54
RHBDD3-202ENST00000406335 STON2Q8WXE9 905 aa18.45■□□□□ 0.54
RHBDD3-202ENST00000406335 MSI2Q96DH6 328 aaKnown RBP18.45■□□□□ 0.54
RHBDD3-202ENST00000406335 MUS81Q96NY9 551 aa18.45■□□□□ 0.54
RHBDD3-202ENST00000406335 RSPO3Q9BXY4 272 aaPredicted RBP18.45■□□□□ 0.54
RHBDD3-202ENST00000406335 HDGFL3Q9Y3E1 203 aa18.45■□□□□ 0.54
RHBDD3-202ENST00000406335 PLCE1Q9P212 2302 aa18.45■□□□□ 0.54
RHBDD3-202ENST00000406335 ZC3H12DA2A288 527 aaKnown RBP18.44■□□□□ 0.54
RHBDD3-202ENST00000406335 NDUFS8O00217 210 aa18.44■□□□□ 0.54
RHBDD3-202ENST00000406335 ARAFP10398 606 aa18.44■□□□□ 0.54
RHBDD3-202ENST00000406335 NR4A2P43354 598 aa18.44■□□□□ 0.54
RHBDD3-202ENST00000406335 HTR3AP46098 478 aa18.44■□□□□ 0.54
RHBDD3-202ENST00000406335 OR2B6P58173 313 aa18.44■□□□□ 0.54
RHBDD3-202ENST00000406335 SNRPD2P62316 118 aaKnown RBP18.44■□□□□ 0.54
RHBDD3-202ENST00000406335 TGFBR3Q03167 851 aa18.44■□□□□ 0.54
RHBDD3-202ENST00000406335 LARS2Q15031 903 aaKnown RBP18.44■□□□□ 0.54
RHBDD3-202ENST00000406335 RNF220Q5VTB9 566 aa18.44■□□□□ 0.54
RHBDD3-202ENST00000406335 ABLIM2Q6H8Q1 611 aa18.44■□□□□ 0.54
RHBDD3-202ENST00000406335 OR52E4Q8NGH9 312 aa18.44■□□□□ 0.54
RHBDD3-202ENST00000406335 NFKBIDQ8NI38 313 aa18.44■□□□□ 0.54
RHBDD3-202ENST00000406335 KCNS3Q9BQ31 491 aa18.44■□□□□ 0.54
RHBDD3-202ENST00000406335 SPATA9Q9BWV2 254 aa18.44■□□□□ 0.54
RHBDD3-202ENST00000406335 ADAM19Q9H013 955 aa18.44■□□□□ 0.54
RHBDD3-202ENST00000406335 BCL2L10Q9HD36 194 aa18.44■□□□□ 0.54
RHBDD3-202ENST00000406335 TMEM45AQ9NWC5 275 aa18.44■□□□□ 0.54
RHBDD3-202ENST00000406335 ZNF232Q9UNY5 417 aa18.44■□□□□ 0.54
RHBDD3-202ENST00000406335 AMDHD2Q9Y303 409 aa18.44■□□□□ 0.54
RHBDD3-202ENST00000406335 IGKV3D-15A0A087WSY6 115 aa18.43■□□□□ 0.54
RHBDD3-202ENST00000406335 A0A0G2JND7 137 aa18.43■□□□□ 0.54
RHBDD3-202ENST00000406335 FRS3O43559 492 aa18.43■□□□□ 0.54
RHBDD3-202ENST00000406335 IMPDH2P12268 514 aa18.43■□□□□ 0.54
RHBDD3-202ENST00000406335 CLK1P49759 484 aaKnown RBP18.43■□□□□ 0.54
RHBDD3-202ENST00000406335 RUNX1T1Q06455 604 aa18.43■□□□□ 0.54
RHBDD3-202ENST00000406335 DLEU7Q6UYE1 221 aa18.43■□□□□ 0.54
RHBDD3-202ENST00000406335 SLC46A3Q7Z3Q1 461 aa18.43■□□□□ 0.54
RHBDD3-202ENST00000406335 SERPINA11Q86U17 422 aa18.43■□□□□ 0.54
RHBDD3-202ENST00000406335 CCDC103Q8IW40 242 aa18.43■□□□□ 0.54
RHBDD3-202ENST00000406335 CADM2Q8N3J6 435 aa18.43■□□□□ 0.54
RHBDD3-202ENST00000406335 FOXN4Q96NZ1 517 aa18.43■□□□□ 0.54
RHBDD3-202ENST00000406335 PARPBPQ9NWS1 579 aa18.43■□□□□ 0.54
RHBDD3-202ENST00000406335 TMEM181Q9P2C4 612 aa18.43■□□□□ 0.54
RHBDD3-202ENST00000406335 MOKQ9UQ07 419 aa18.43■□□□□ 0.54
RHBDD3-202ENST00000406335 ZNF716A6NP11 495 aa18.42■□□□□ 0.54
RHBDD3-202ENST00000406335 ATP6V1G2-DDX39BF2Z307 99 aa18.42■□□□□ 0.54
RHBDD3-202ENST00000406335 TCF21O43680 179 aa18.42■□□□□ 0.54
RHBDD3-202ENST00000406335 WNT11O96014 354 aa18.42■□□□□ 0.54
RHBDD3-202ENST00000406335 UQCRBP14927 111 aa18.42■□□□□ 0.54
RHBDD3-202ENST00000406335 CDH2P19022 906 aaPredicted RBP18.42■□□□□ 0.54
RHBDD3-202ENST00000406335 FKBP2P26885 142 aaKnown RBP18.42■□□□□ 0.54
RHBDD3-202ENST00000406335 SRP14P37108 136 aaKnown RBP18.42■□□□□ 0.54
RHBDD3-202ENST00000406335 FOXG1P55316 489 aaPredicted RBP18.42■□□□□ 0.54
RHBDD3-202ENST00000406335 PRPS1P60891 318 aa18.42■□□□□ 0.54
RHBDD3-202ENST00000406335 BNIP2Q12982 314 aa18.42■□□□□ 0.54
RHBDD3-202ENST00000406335 ZNF311Q5JNZ3 666 aa18.42■□□□□ 0.54
RHBDD3-202ENST00000406335 GCNT6Q5T4J0 391 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms