RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 SQLEQ14534 574 aa13.47□□□□□ -0.25
TPM1-207ENST00000403994 AGKQ53H12 422 aa13.47□□□□□ -0.25
TPM1-207ENST00000403994 REEP3Q6NUK4 255 aa13.47□□□□□ -0.25
TPM1-207ENST00000403994 SLC22A25Q6T423 547 aa13.47□□□□□ -0.25
TPM1-207ENST00000403994 POMGNT2Q8NAT1 580 aa13.47□□□□□ -0.25
TPM1-207ENST00000403994 GRIP2Q9C0E4 1043 aa13.47□□□□□ -0.25
TPM1-207ENST00000403994 TMEM45AQ9NWC5 275 aa13.47□□□□□ -0.25
TPM1-207ENST00000403994 POU2F3Q9UKI9 436 aa13.47□□□□□ -0.25
TPM1-207ENST00000403994 ELOA3DA6NLF2 546 aaPredicted RBP13.46□□□□□ -0.25
TPM1-207ENST00000403994 E7EQL1 145 aa13.46□□□□□ -0.25
TPM1-207ENST00000403994 VAMP5O95183 116 aa13.46□□□□□ -0.25
TPM1-207ENST00000403994 PNMTP11086 282 aa13.46□□□□□ -0.25
TPM1-207ENST00000403994 PTNP21246 168 aa13.46□□□□□ -0.25
TPM1-207ENST00000403994 PCSK6P29122 969 aa13.46□□□□□ -0.25
TPM1-207ENST00000403994 RPS5P46782 204 aaKnown RBP13.46□□□□□ -0.25
TPM1-207ENST00000403994 SELENOPP49908 381 aa13.46□□□□□ -0.25
TPM1-207ENST00000403994 IRX1P78414 480 aaPredicted RBP13.46□□□□□ -0.25
TPM1-207ENST00000403994 CDK6Q00534 326 aa13.46□□□□□ -0.25
TPM1-207ENST00000403994 ELOA3BQ3SY89 546 aa13.46□□□□□ -0.25
TPM1-207ENST00000403994 C11orf71Q6IPW1 123 aa13.46□□□□□ -0.25
TPM1-207ENST00000403994 DHRS4L2Q6PKH6 230 aa13.46□□□□□ -0.25
TPM1-207ENST00000403994 DNM1P46Q6ZS02 220 aa13.46□□□□□ -0.25
TPM1-207ENST00000403994 CREB3L2Q70SY1 520 aa13.46□□□□□ -0.25
TPM1-207ENST00000403994 ELOA3Q8NG57 546 aa13.46□□□□□ -0.25
TPM1-207ENST00000403994 MFSD8Q8NHS3 518 aa13.46□□□□□ -0.25
TPM1-207ENST00000403994 STON2Q8WXE9 905 aa13.46□□□□□ -0.25
TPM1-207ENST00000403994 KTI12Q96EK9 354 aaPredicted RBP13.46□□□□□ -0.25
TPM1-207ENST00000403994 HS6ST2Q96MM7 605 aa13.46□□□□□ -0.25
TPM1-207ENST00000403994 DHRS9Q9BPW9 319 aa13.46□□□□□ -0.25
TPM1-207ENST00000403994 CPPED1Q9BRF8 314 aaPredicted RBP13.46□□□□□ -0.25
TPM1-207ENST00000403994 C1QTNF6Q9BXI9 259 aa13.46□□□□□ -0.25
TPM1-207ENST00000403994 RPS6KB2Q9UBS0 482 aa13.46□□□□□ -0.25
TPM1-207ENST00000403994 SEC14L4Q9UDX3 406 aa13.46□□□□□ -0.25
TPM1-207ENST00000403994 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.46□□□□□ -0.25
TPM1-207ENST00000403994 GDF2Q9UK05 429 aaPredicted RBP13.46□□□□□ -0.25
TPM1-207ENST00000403994 CORO2BQ9UQ03 480 aa13.46□□□□□ -0.25
TPM1-207ENST00000403994 RASD1Q9Y272 281 aa13.46□□□□□ -0.25
TPM1-207ENST00000403994 ABCA1O95477 2261 aa13.46□□□□□ -0.26
TPM1-207ENST00000403994 IGKV1D-42A0A075B6H8 117 aa13.45□□□□□ -0.26
TPM1-207ENST00000403994 A0A1B0GWA3 101 aa13.45□□□□□ -0.26
TPM1-207ENST00000403994 HMGB1P1B2RPK0 211 aaPredicted RBP13.45□□□□□ -0.26
TPM1-207ENST00000403994 INAFM1C9JVW0 142 aa13.45□□□□□ -0.26
TPM1-207ENST00000403994 RNF223E7ERA6 249 aa13.45□□□□□ -0.26
TPM1-207ENST00000403994 ZNF587BE7ETH6 402 aa13.45□□□□□ -0.26
TPM1-207ENST00000403994 CDH2P19022 906 aaPredicted RBP13.45□□□□□ -0.26
TPM1-207ENST00000403994 GTF2E2P29084 291 aaKnown RBP13.45□□□□□ -0.26
TPM1-207ENST00000403994 TTKP33981 857 aa13.45□□□□□ -0.26
TPM1-207ENST00000403994 SCARB2Q14108 478 aa13.45□□□□□ -0.26
TPM1-207ENST00000403994 ADRM1Q16186 407 aa13.45□□□□□ -0.26
TPM1-207ENST00000403994 GLIPR1L2Q4G1C9 344 aa13.45□□□□□ -0.26
TPM1-207ENST00000403994 HIKESHIQ53FT3 197 aa13.45□□□□□ -0.26
TPM1-207ENST00000403994 AGAP6Q5VW22 663 aa13.45□□□□□ -0.26
TPM1-207ENST00000403994 TMEM225Q6GV28 225 aa13.45□□□□□ -0.26
TPM1-207ENST00000403994 KLHL24Q6TFL4 600 aa13.45□□□□□ -0.26
TPM1-207ENST00000403994 LINGO2Q7L985 606 aa13.45□□□□□ -0.26
TPM1-207ENST00000403994 ABHD12BQ7Z5M8 362 aaPredicted RBP13.45□□□□□ -0.26
TPM1-207ENST00000403994 KRT73Q86Y46 540 aa13.45□□□□□ -0.26
TPM1-207ENST00000403994 EPHX4Q8IUS5 362 aa13.45□□□□□ -0.26
TPM1-207ENST00000403994 LSMEM1Q8N8F7 131 aa13.45□□□□□ -0.26
TPM1-207ENST00000403994 MAPK1IP1LQ8NDC0 245 aa13.45□□□□□ -0.26
TPM1-207ENST00000403994 CACNG6Q9BXT2 260 aa13.45□□□□□ -0.26
TPM1-207ENST00000403994 ZNF385DQ9H6B1 395 aa13.45□□□□□ -0.26
TPM1-207ENST00000403994 TMEM38AQ9H6F2 299 aa13.45□□□□□ -0.26
TPM1-207ENST00000403994 C12orf10Q9HB07 376 aa13.45□□□□□ -0.26
TPM1-207ENST00000403994 BARX1Q9HBU1 254 aaPredicted RBP13.45□□□□□ -0.26
TPM1-207ENST00000403994 INTS9Q9NV88 658 aaKnown RBP13.45□□□□□ -0.26
TPM1-207ENST00000403994 TESQ9UGI8 421 aaKnown RBP13.45□□□□□ -0.26
TPM1-207ENST00000403994 B3GALT5Q9Y2C3 310 aa13.45□□□□□ -0.26
TPM1-207ENST00000403994 ATP6V1G2-DDX39BF2Z307 99 aa13.44□□□□□ -0.26
TPM1-207ENST00000403994 TPST1O60507 370 aa13.44□□□□□ -0.26
TPM1-207ENST00000403994 KRT33AO76009 404 aa13.44□□□□□ -0.26
TPM1-207ENST00000403994 GPX2P18283 190 aa13.44□□□□□ -0.26
TPM1-207ENST00000403994 AQP1P29972 269 aa13.44□□□□□ -0.26
TPM1-207ENST00000403994 NRF1Q16656 503 aa13.44□□□□□ -0.26
TPM1-207ENST00000403994 C1QTNF12Q5T7M4 302 aa13.44□□□□□ -0.26
TPM1-207ENST00000403994 NIPAL3Q6P499 406 aa13.44□□□□□ -0.26
TPM1-207ENST00000403994 DLEU7Q6UYE1 221 aa13.44□□□□□ -0.26
TPM1-207ENST00000403994 DHDDSQ86SQ9 333 aa13.44□□□□□ -0.26
TPM1-207ENST00000403994 MUC15Q8N387 334 aa13.44□□□□□ -0.26
TPM1-207ENST00000403994 OR1K1Q8NGR3 316 aa13.44□□□□□ -0.26
TPM1-207ENST00000403994 CKAP2Q8WWK9 683 aa13.44□□□□□ -0.26
TPM1-207ENST00000403994 SLC25A36Q96CQ1 311 aa13.44□□□□□ -0.26
TPM1-207ENST00000403994 THOC1Q96FV9 657 aaKnown RBP13.44□□□□□ -0.26
TPM1-207ENST00000403994 BOD1Q96IK1 185 aa13.44□□□□□ -0.26
TPM1-207ENST00000403994 SPATA5L1Q9BVQ7 753 aa13.44□□□□□ -0.26
TPM1-207ENST00000403994 CBLN4Q9NTU7 201 aa13.44□□□□□ -0.26
TPM1-207ENST00000403994 B3GAT1Q9P2W7 334 aa13.44□□□□□ -0.26
TPM1-207ENST00000403994 FBN1P35555 2871 aaKnown RBP13.44□□□□□ -0.26
TPM1-207ENST00000403994 ARFGEF3Q5TH69 2177 aa13.44□□□□□ -0.26
TPM1-207ENST00000403994 OR6C65A6NJZ3 312 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 M0R082 166 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 LGI1O95970 557 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 WNT11O96014 354 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 SLC6A2P23975 617 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 RGS8P57771 180 aaPredicted RBP13.43□□□□□ -0.26
TPM1-207ENST00000403994 PRPS1P60891 318 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 NCALDP61601 193 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 TBRG1Q3YBR2 411 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 ALG10BQ5I7T1 473 aa13.43□□□□□ -0.26
TPM1-207ENST00000403994 FAM69AQ5T7M9 428 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms