RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 NDUFV2P19404 249 aa12.96□□□□□ -0.33
ATG3-202ENST00000402314 F8A1P23610 371 aa12.96□□□□□ -0.33
ATG3-202ENST00000402314 TEAD1P28347 426 aa12.96□□□□□ -0.33
ATG3-202ENST00000402314 ALG11Q2TAA5 492 aa12.96□□□□□ -0.33
ATG3-202ENST00000402314 BEX5Q5H9J7 111 aa12.96□□□□□ -0.33
ATG3-202ENST00000402314 UBE2Q1Q7Z7E8 422 aa12.96□□□□□ -0.33
ATG3-202ENST00000402314 COX18Q8N8Q8 333 aa12.96□□□□□ -0.33
ATG3-202ENST00000402314 OR2T33Q8NG76 320 aa12.96□□□□□ -0.33
ATG3-202ENST00000402314 OR4N2Q8NGD1 307 aa12.96□□□□□ -0.33
ATG3-202ENST00000402314 OSTF1Q92882 214 aa12.96□□□□□ -0.33
ATG3-202ENST00000402314 WDR92Q96MX6 357 aa12.96□□□□□ -0.33
ATG3-202ENST00000402314 PTCHD1Q96NR3 888 aa12.96□□□□□ -0.33
ATG3-202ENST00000402314 OR14A2Q96R54 314 aa12.96□□□□□ -0.33
ATG3-202ENST00000402314 MNTQ99583 582 aa12.96□□□□□ -0.33
ATG3-202ENST00000402314 NPAS1Q99742 590 aa12.96□□□□□ -0.33
ATG3-202ENST00000402314 GAL3ST1Q99999 423 aa12.96□□□□□ -0.33
ATG3-202ENST00000402314 ZNF559Q9BR84 538 aa12.96□□□□□ -0.33
ATG3-202ENST00000402314 TRIM36Q9NQ86 728 aa12.96□□□□□ -0.33
ATG3-202ENST00000402314 HPF1Q9NWY4 346 aa12.96□□□□□ -0.33
ATG3-202ENST00000402314 ATG2AQ2TAZ0 1938 aa12.96□□□□□ -0.33
ATG3-202ENST00000402314 CDHR4A6H8M9 788 aa12.96□□□□□ -0.34
ATG3-202ENST00000402314 GRPRP30550 384 aa12.96□□□□□ -0.34
ATG3-202ENST00000402314 GABRA3P34903 492 aa12.96□□□□□ -0.34
ATG3-202ENST00000402314 NAA10P41227 235 aaPredicted RBP12.96□□□□□ -0.34
ATG3-202ENST00000402314 EEF1A1P68104 462 aaKnown RBP12.96□□□□□ -0.34
ATG3-202ENST00000402314 HLXQ14774 488 aaPredicted RBP12.96□□□□□ -0.34
ATG3-202ENST00000402314 NFATC4Q14934 902 aa12.96□□□□□ -0.34
ATG3-202ENST00000402314 OR1Q1Q15612 314 aa12.96□□□□□ -0.34
ATG3-202ENST00000402314 DCST2Q5T1A1 773 aa12.96□□□□□ -0.34
ATG3-202ENST00000402314 STPG1Q5TH74 334 aa12.96□□□□□ -0.34
ATG3-202ENST00000402314 CMTM4Q8IZR5 234 aa12.96□□□□□ -0.34
ATG3-202ENST00000402314 NOX3Q9HBY0 568 aa12.96□□□□□ -0.34
ATG3-202ENST00000402314 HRASLSQ9HDD0 168 aa12.96□□□□□ -0.34
ATG3-202ENST00000402314 MRPS18AQ9NVS2 196 aaKnown RBP12.96□□□□□ -0.34
ATG3-202ENST00000402314 CALML5Q9NZT1 146 aa12.96□□□□□ -0.34
ATG3-202ENST00000402314 PIPOXQ9P0Z9 390 aa12.96□□□□□ -0.34
ATG3-202ENST00000402314 COPZ2Q9P299 210 aa12.96□□□□□ -0.34
ATG3-202ENST00000402314 DUXAA6NLW8 204 aa12.95□□□□□ -0.34
ATG3-202ENST00000402314 HRKO00198 91 aa12.95□□□□□ -0.34
ATG3-202ENST00000402314 PTBP1P26599 531 aaKnown RBP eCLIP12.95□□□□□ -0.341e-6■■□□□ 12.5
ATG3-202ENST00000402314 HTR1FP30939 366 aa12.95□□□□□ -0.34
ATG3-202ENST00000402314 SCARF2Q96GP6 870 aaPredicted RBP12.95□□□□□ -0.34
ATG3-202ENST00000402314 UBL7Q96S82 380 aaPredicted RBP12.95□□□□□ -0.34
ATG3-202ENST00000402314 SIDT1Q9NXL6 827 aaKnown RBP12.95□□□□□ -0.34
ATG3-202ENST00000402314 PCDHGA5Q9Y5G8 931 aa12.95□□□□□ -0.34
ATG3-202ENST00000402314 SLC22A7Q9Y694 548 aa12.95□□□□□ -0.34
ATG3-202ENST00000402314 SLCO1B1Q9Y6L6 691 aa12.95□□□□□ -0.34
ATG3-202ENST00000402314 IRGMA1A4Y4 181 aa12.95□□□□□ -0.34
ATG3-202ENST00000402314 SAGP10523 405 aaPredicted RBP12.95□□□□□ -0.34
ATG3-202ENST00000402314 PSMB1P20618 241 aaKnown RBP12.95□□□□□ -0.34
ATG3-202ENST00000402314 CTHP32929 405 aa12.95□□□□□ -0.34
ATG3-202ENST00000402314 STAT5AP42229 794 aa12.95□□□□□ -0.34
ATG3-202ENST00000402314 CCR9P51686 369 aa12.95□□□□□ -0.34
ATG3-202ENST00000402314 LINC00303Q3SY05 128 aa12.95□□□□□ -0.34
ATG3-202ENST00000402314 OR10Z1Q8NGY1 313 aa12.95□□□□□ -0.34
ATG3-202ENST00000402314 OR52N1Q8NH53 320 aa12.95□□□□□ -0.34
ATG3-202ENST00000402314 FANK1Q8TC84 345 aa12.95□□□□□ -0.34
ATG3-202ENST00000402314 LRRC46Q96FV0 321 aa12.95□□□□□ -0.34
ATG3-202ENST00000402314 ZNF578Q96N58 590 aaPredicted RBP12.95□□□□□ -0.34
ATG3-202ENST00000402314 ISYNA1Q9NPH2 558 aa12.95□□□□□ -0.34
ATG3-202ENST00000402314 PILRAQ9UKJ1 303 aa12.95□□□□□ -0.34
ATG3-202ENST00000402314 HEBP2Q9Y5Z4 205 aa12.95□□□□□ -0.34
ATG3-202ENST00000402314 FANCMQ8IYD8 2048 aa12.95□□□□□ -0.34
ATG3-202ENST00000402314 ACOD1A6NK06 481 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 MCRIP1C9JLW8 97 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 SUSD5O60279 629 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 MTRF1O75570 445 aaKnown RBP12.94□□□□□ -0.34
ATG3-202ENST00000402314 RPS15P62841 145 aaKnown RBP12.94□□□□□ -0.34
ATG3-202ENST00000402314 LGALS3BPQ08380 585 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 KLF9Q13886 244 aaPredicted RBP12.94□□□□□ -0.34
ATG3-202ENST00000402314 ERV3-1Q14264 604 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 ARHGAP11BQ3KRB8 267 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 HSD17B12Q53GQ0 312 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 PRAMEF8Q5VWM4 474 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 PRAMEF7Q5VXH5 474 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 HDDC2Q7Z4H3 204 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 SDR16C5Q8N3Y7 309 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 ELSPBP1Q96BH3 223 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 KCTD12Q96CX2 325 aaKnown RBP12.94□□□□□ -0.34
ATG3-202ENST00000402314 TM4SF19Q96DZ7 209 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 PEX11GQ96HA9 241 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 SERINC2Q96SA4 455 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 USB1Q9BQ65 265 aaKnown RBP12.94□□□□□ -0.34
ATG3-202ENST00000402314 EVA1AQ9H8M9 152 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 IL21RQ9HBE5 538 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 HRASLS2Q9NWW9 162 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 ZMIZ1Q9ULJ6 1067 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 IDSB3KWA1 339 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 RDH16O75452 317 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 UBL3O95164 117 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 RLN2P04090 185 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 SMIM10L1P0DMW3 83 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 ACHEP22303 614 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 TLX1P31314 330 aaPredicted RBP12.94□□□□□ -0.34
ATG3-202ENST00000402314 NDUFAF6Q330K2 333 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 GXYLT1Q4G148 440 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 PRPF38BQ5VTL8 546 aaKnown RBP12.94□□□□□ -0.34
ATG3-202ENST00000402314 C11orf88Q6PI97 169 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 TFAP2EQ6VUC0 442 aa12.94□□□□□ -0.34
ATG3-202ENST00000402314 Q6ZSR6 202 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms