RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 OR9Q2Q8NGE9 314 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 OR6S1Q8NH40 331 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 WNT2BQ93097 391 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 PKP2Q99959 881 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 VKORC1Q9BQB6 163 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 TAPBPLQ9BX59 468 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 RNF122Q9H9V4 155 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 NANSQ9NR45 359 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 MBD3L4A6NDZ8 208 aaPredicted RBP14.23□□□□□ -0.13
HMGA1-204ENST00000401473 MBD3L3A6NE82 208 aaPredicted RBP14.23□□□□□ -0.13
HMGA1-204ENST00000401473 MBD3L5A6NJ08 208 aaPredicted RBP14.23□□□□□ -0.13
HMGA1-204ENST00000401473 M0R082 166 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 ELF3P78545 371 aaPredicted RBP14.23□□□□□ -0.13
HMGA1-204ENST00000401473 FHL1Q13642 323 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 MICAQ29983 383 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 FCRLAQ7L513 359 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 NAXEQ8NCW5 288 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 MBD3L2Q8NHZ7 208 aaPredicted RBP14.23□□□□□ -0.13
HMGA1-204ENST00000401473 ZNF417Q8TAU3 575 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 RNF128Q8TEB7 428 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 LIPHQ8WWY8 451 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 FAM46AQ96IP4 442 aaKnown RBP14.23□□□□□ -0.13
HMGA1-204ENST00000401473 ZNF587Q96SQ5 575 aaPredicted RBP14.23□□□□□ -0.13
HMGA1-204ENST00000401473 SEMA6AQ9H2E6 1030 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 KLHL13Q9P2N7 655 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 MCTS1Q9ULC4 181 aaKnown RBP14.23□□□□□ -0.13
HMGA1-204ENST00000401473 ZNF175Q9Y473 711 aa14.23□□□□□ -0.13
HMGA1-204ENST00000401473 DOPEY1Q5JWR5 2465 aa14.22□□□□□ -0.13
HMGA1-204ENST00000401473 MS4A18H0YCH9 400 aa14.22□□□□□ -0.13
HMGA1-204ENST00000401473 DNPH1O43598 174 aa14.22□□□□□ -0.13
HMGA1-204ENST00000401473 OR10H3O60404 316 aa14.22□□□□□ -0.13
HMGA1-204ENST00000401473 EIF1BO60739 113 aaKnown RBP14.22□□□□□ -0.13
HMGA1-204ENST00000401473 DEAF1O75398 565 aaPredicted RBP14.22□□□□□ -0.13
HMGA1-204ENST00000401473 SYNGR4O95473 234 aa14.22□□□□□ -0.13
HMGA1-204ENST00000401473 MT-ATP6P00846 226 aa14.22□□□□□ -0.13
HMGA1-204ENST00000401473 LDLRP01130 860 aa14.22□□□□□ -0.13
HMGA1-204ENST00000401473 GASTP01350 101 aa14.22□□□□□ -0.13
HMGA1-204ENST00000401473 PRKACGP22612 351 aa14.22□□□□□ -0.13
HMGA1-204ENST00000401473 DNAJA1P31689 397 aaKnown RBP14.22□□□□□ -0.13
HMGA1-204ENST00000401473 TIMP3P35625 211 aa14.22□□□□□ -0.13
HMGA1-204ENST00000401473 GPR4P46093 362 aa14.22□□□□□ -0.13
HMGA1-204ENST00000401473 CASP6P55212 293 aa14.22□□□□□ -0.13
HMGA1-204ENST00000401473 NUP107P57740 925 aa14.22□□□□□ -0.13
HMGA1-204ENST00000401473 FOXF2Q12947 444 aa14.22□□□□□ -0.13
HMGA1-204ENST00000401473 SF3B4Q15427 424 aaKnown RBP eCLIP14.22□□□□□ -0.133e-7■■□□□ 12.6
HMGA1-204ENST00000401473 MS4A18Q3C1V0 323 aa14.22□□□□□ -0.13
HMGA1-204ENST00000401473 OTUD3Q5T2D3 398 aaPredicted RBP14.22□□□□□ -0.13
HMGA1-204ENST00000401473 TMPRSS11FQ6ZWK6 438 aa14.22□□□□□ -0.13
HMGA1-204ENST00000401473 ZNF775Q96BV0 537 aaPredicted RBP14.22□□□□□ -0.13
HMGA1-204ENST00000401473 SGTBQ96EQ0 304 aa14.22□□□□□ -0.13
HMGA1-204ENST00000401473 PRRG4Q9BZD6 226 aa14.22□□□□□ -0.13
HMGA1-204ENST00000401473 FKRPQ9H9S5 495 aa14.22□□□□□ -0.13
HMGA1-204ENST00000401473 TAS2R5Q9NYW4 299 aa14.22□□□□□ -0.13
HMGA1-204ENST00000401473 ERRFI1Q9UJM3 462 aaPredicted RBP14.22□□□□□ -0.13
HMGA1-204ENST00000401473 TMCC3Q9ULS5 477 aa14.22□□□□□ -0.13
HMGA1-204ENST00000401473 AQP7P3A6NL99 342 aa14.21□□□□□ -0.13
HMGA1-204ENST00000401473 KLF4O43474 513 aa14.21□□□□□ -0.13
HMGA1-204ENST00000401473 CYTIPO60759 359 aa14.21□□□□□ -0.13
HMGA1-204ENST00000401473 OR7A10O76100 309 aa14.21□□□□□ -0.13
HMGA1-204ENST00000401473 RCBTB2O95199 551 aa14.21□□□□□ -0.13
HMGA1-204ENST00000401473 NTF4P34130 210 aa14.21□□□□□ -0.13
HMGA1-204ENST00000401473 ANKRD34AQ69YU3 496 aa14.21□□□□□ -0.13
HMGA1-204ENST00000401473 C1orf94Q6P1W5 598 aa14.21□□□□□ -0.13
HMGA1-204ENST00000401473 H1FNTQ75WM6 255 aaPredicted RBP14.21□□□□□ -0.13
HMGA1-204ENST00000401473 C10orf67Q8IYJ2 551 aa14.21□□□□□ -0.13
HMGA1-204ENST00000401473 GCNT2Q8N0V5 402 aa14.21□□□□□ -0.13
HMGA1-204ENST00000401473 PSD2Q9BQI7 771 aa14.21□□□□□ -0.13
HMGA1-204ENST00000401473 MRPL39Q9NYK5 338 aaKnown RBP14.21□□□□□ -0.13
HMGA1-204ENST00000401473 ZNF229Q9UJW7 825 aa14.21□□□□□ -0.13
HMGA1-204ENST00000401473 CLEC4AQ9UMR7 237 aa14.21□□□□□ -0.13
HMGA1-204ENST00000401473 ZNF716A6NP11 495 aa14.21□□□□□ -0.14
HMGA1-204ENST00000401473 PLPP3O14495 311 aa14.21□□□□□ -0.14
HMGA1-204ENST00000401473 TSPAN19P0C672 248 aa14.21□□□□□ -0.14
HMGA1-204ENST00000401473 POU2F1P14859 743 aa14.21□□□□□ -0.14
HMGA1-204ENST00000401473 CEACAM8P31997 349 aaPredicted RBP14.21□□□□□ -0.14
HMGA1-204ENST00000401473 SLC17A1Q14916 467 aa14.21□□□□□ -0.14
HMGA1-204ENST00000401473 MFSD13AQ14CX5 517 aa14.21□□□□□ -0.14
HMGA1-204ENST00000401473 TMEM225Q6GV28 225 aa14.21□□□□□ -0.14
HMGA1-204ENST00000401473 PGBD2Q6P3X8 592 aa14.21□□□□□ -0.14
HMGA1-204ENST00000401473 MAMDC2Q7Z304 686 aaPredicted RBP14.21□□□□□ -0.14
HMGA1-204ENST00000401473 INTS12Q96CB8 462 aaKnown RBP14.21□□□□□ -0.14
HMGA1-204ENST00000401473 BDH2Q9BUT1 245 aa14.21□□□□□ -0.14
HMGA1-204ENST00000401473 B3GAT1Q9P2W7 334 aa14.21□□□□□ -0.14
HMGA1-204ENST00000401473 B3GALT5Q9Y2C3 310 aa14.21□□□□□ -0.14
HMGA1-204ENST00000401473 CORINQ9Y5Q5 1042 aa14.21□□□□□ -0.14
HMGA1-204ENST00000401473 HTR3EA5X5Y0 456 aa14.2□□□□□ -0.14
HMGA1-204ENST00000401473 BLOC1S5-TXNDC5H3BN57 136 aa14.2□□□□□ -0.14
HMGA1-204ENST00000401473 E2F6O75461 281 aa14.2□□□□□ -0.14
HMGA1-204ENST00000401473 CCNB2O95067 398 aa14.2□□□□□ -0.14
HMGA1-204ENST00000401473 HPRP00739 348 aa14.2□□□□□ -0.14
HMGA1-204ENST00000401473 SAGP10523 405 aaPredicted RBP14.2□□□□□ -0.14
HMGA1-204ENST00000401473 FCGR1AP12314 374 aa14.2□□□□□ -0.14
HMGA1-204ENST00000401473 HLA-DOBP13765 273 aa14.2□□□□□ -0.14
HMGA1-204ENST00000401473 ZNF26P17031 533 aaPredicted RBP14.2□□□□□ -0.14
HMGA1-204ENST00000401473 RASGEF1BQ0VAM2 473 aa14.2□□□□□ -0.14
HMGA1-204ENST00000401473 C4orf17Q53FE4 359 aa14.2□□□□□ -0.14
HMGA1-204ENST00000401473 ABLIM2Q6H8Q1 611 aa14.2□□□□□ -0.14
HMGA1-204ENST00000401473 NHLRC1Q6VVB1 395 aa14.2□□□□□ -0.14
HMGA1-204ENST00000401473 P4HA3Q7Z4N8 544 aa14.2□□□□□ -0.14
HMGA1-204ENST00000401473 CDK20Q8IZL9 346 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms