RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 UTP23Q9BRU9 249 aaKnown RBP10.55□□□□□ -0.72
SKA3-203ENST00000400018 EMC6Q9BV81 110 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 IFT27Q9BW83 186 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 SLC6A15Q9H2J7 730 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 HHATLQ9HCP6 504 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 SH2D2AQ9NP31 389 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 CORINQ9Y5Q5 1042 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 CACNA1BQ00975 2339 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 MED19A0JLT2 244 aaPredicted RBP10.55□□□□□ -0.72
SKA3-203ENST00000400018 UNC119BA6NIH7 251 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 KDM4EB2RXH2 506 aaPredicted RBP10.55□□□□□ -0.72
SKA3-203ENST00000400018 TAF4O00268 1085 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 LRRTM2O43300 516 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 KLF4O43474 513 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 ENTPD6O75354 484 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 ICAM2P13598 275 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 MYF6P23409 242 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 GDF1P27539 372 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 C21orf33P30042 268 aaPredicted RBP10.55□□□□□ -0.72
SKA3-203ENST00000400018 IFNA8P32881 189 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 RPL4P36578 427 aaKnown RBP10.55□□□□□ -0.72
SKA3-203ENST00000400018 MAP2K4P45985 399 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 GIPRP48546 466 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 HCCSP53701 268 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 RGS21Q2M5E4 152 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 AGAP7PQ5VUJ5 663 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 ZNF620Q6ZNG0 422 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 PLCZ1Q86YW0 608 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 NRBF2Q96F24 287 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 AGAP4Q96P64 663 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 PTDSS2Q9BVG9 487 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 ADAM19Q9H013 955 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 PALMDQ9NP74 551 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 MGAT4BQ9UQ53 548 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 SIGLEC7Q9Y286 467 aa10.55□□□□□ -0.72
SKA3-203ENST00000400018 PRR14LQ5THK1 2151 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 A0A1W2PQD3 144 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 MAGEB4O15481 346 aaPredicted RBP10.54□□□□□ -0.72
SKA3-203ENST00000400018 ADAP00813 363 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 ADH7P40394 386 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 ID4P47928 161 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 BMXP51813 675 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 ZNF41P51814 821 aaPredicted RBP10.54□□□□□ -0.72
SKA3-203ENST00000400018 SLC16A1P53985 500 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 TSPAN31Q12999 210 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 SNAPC1Q16533 368 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 NDUFA5Q16718 116 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 PAQR6Q6TCH4 344 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 PTCHD4Q6ZW05 846 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 AHSA2Q719I0 299 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 CADM3Q8N126 398 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 OR14L1PQ8NHC6 308 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 TBC1D15Q8TC07 691 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 ISOC1Q96CN7 298 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 C1GALT1C1Q96EU7 318 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 FER1L6-AS2Q96M78 137 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 UCN2Q96RP3 112 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 ZNF426Q9BUY5 554 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 UBQLN3Q9H347 655 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 NANSQ9NR45 359 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 ERVK-18Q9QC07 812 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 IER3IP1Q9Y5U9 82 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 OR2M5A3KFT3 312 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 ZAR1LA6NP61 321 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 M0R082 166 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 ATE1O95260 518 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 HPRP00739 348 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 HK1P19367 917 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 ALDH3B2P48448 385 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 PRKCDQ05655 676 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 RUNX1T1Q06455 604 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 MAD2L1BPQ15013 274 aaPredicted RBP10.54□□□□□ -0.72
SKA3-203ENST00000400018 TRIM16LQ309B1 348 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 TIGD3Q6B0B8 471 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 THAP5Q7Z6K1 395 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 GPAT4Q86UL3 456 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 CMIPQ8IY22 773 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 ZNF417Q8TAU3 575 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 GNPDA2Q8TDQ7 276 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 TTC9Q92623 222 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 SGTBQ96EQ0 304 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 HRASLS5Q96KN8 279 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 Q96M85 177 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 ZNF587Q96SQ5 575 aaPredicted RBP10.54□□□□□ -0.72
SKA3-203ENST00000400018 TBX5Q99593 518 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 ANGPTL4Q9BY76 406 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 IMPAD1Q9NX62 359 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 MED29Q9NX70 200 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 DKKL1Q9UK85 242 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 KIAA1549Q9HCM3 1950 aa10.54□□□□□ -0.72
SKA3-203ENST00000400018 A0A1W2PQ72 361 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 ANKUB1A6NFN9 424 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 TNFSF11O14788 317 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 HTR1AP08908 422 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 MRPL3P09001 348 aaKnown RBP10.53□□□□□ -0.72
SKA3-203ENST00000400018 GRPRP30550 384 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 FOXO1Q12778 655 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 ZNF74Q16587 644 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 CCDC81Q6ZN84 652 aa10.53□□□□□ -0.72
SKA3-203ENST00000400018 TMEM99Q8N816 258 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms