RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 CTBSQ01459 385 aa8.06□□□□□ -1.12
CACNA1C-220ENST00000399655 GATSQ8NAP1 163 aa8.06□□□□□ -1.12
CACNA1C-220ENST00000399655 OR5M1Q8NGP8 315 aa8.06□□□□□ -1.12
CACNA1C-220ENST00000399655 ELOVL3Q9HB03 270 aa8.06□□□□□ -1.12
CACNA1C-220ENST00000399655 ZNF727A8MUV8 499 aa8.06□□□□□ -1.12
CACNA1C-220ENST00000399655 ADAM23O75077 832 aa8.06□□□□□ -1.12
CACNA1C-220ENST00000399655 SOX14O95416 240 aa8.06□□□□□ -1.12
CACNA1C-220ENST00000399655 HIST1H1CP16403 213 aaKnown RBP8.06□□□□□ -1.12
CACNA1C-220ENST00000399655 PLCXD2Q0VAA5 305 aa8.06□□□□□ -1.12
CACNA1C-220ENST00000399655 SLBPQ14493 270 aaKnown RBP eCLIP8.06□□□□□ -1.12
CACNA1C-220ENST00000399655 KHDC1Q4VXA5 237 aaKnown RBP8.06□□□□□ -1.12
CACNA1C-220ENST00000399655 GJB7Q6PEY0 223 aa8.06□□□□□ -1.12
CACNA1C-220ENST00000399655 MFSD4AQ8N468 514 aa8.06□□□□□ -1.12
CACNA1C-220ENST00000399655 OR2I1PQ8NGU4 316 aa8.06□□□□□ -1.12
CACNA1C-220ENST00000399655 ZNF768Q9H5H4 540 aaKnown RBP8.06□□□□□ -1.12
CACNA1C-220ENST00000399655 PSG11Q9UQ72 335 aa8.06□□□□□ -1.12
CACNA1C-220ENST00000399655 A0A0B4J203 849 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 MT-CYBP00156 380 aaPredicted RBP8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 GLRA1P23415 457 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 MAT1AQ00266 395 aaKnown RBP8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 TPBGQ13641 420 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 ZNF534Q76KX8 674 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 TAC4Q86UU9 113 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 UBAC2Q8NBM4 344 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 TMEM116Q8NCL8 245 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 OR4K13Q8NH42 304 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 ZNF519Q8TB69 540 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 RTP3Q9BQQ7 232 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 PGPEP1Q9NXJ5 209 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 C5AR1P21730 350 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 INCA1Q0VD86 236 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 LTB4RQ15722 352 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 NMUR1Q9HB89 426 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 TRAPPC2LQ9UL33 140 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 KIF1AQ12756 1690 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 PRAMEF27A3QJZ7 478 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 GABRDO14764 452 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 PER1O15534 1290 aaPredicted RBP8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 KIAA1024LP59773 190 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 TP53I3Q53FA7 332 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 SOWAHCQ53LP3 525 aaPredicted RBP8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 PRAMEF9Q5VWM5 478 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 OR5M10Q6IEU7 315 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 PLEKHH3Q7Z736 793 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 C19orf47Q8N9M1 422 aaKnown RBP8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 PLK3Q9H4B4 646 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 FZD1Q9UP38 647 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 NCKAP5O14513 1909 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 FABP4P15090 132 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 CDC34P49427 236 aaPredicted RBP8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 CARD18P57730 90 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 PAX5Q02548 391 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 C12orf54Q6X4T0 127 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 RNF130Q86XS8 419 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 WFIKKN2Q8TEU8 576 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 ZNFX1Q9P2E3 1918 aaKnown RBP8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 OR51F1A6NGY5 319 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 KCNQ2O43526 872 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 SIX6O95475 246 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 IGFBP4P22692 258 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 WNT7BP56706 349 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 NCR3LG1Q68D85 454 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 OR5D18Q8NGL1 313 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 LRRC3BQ96PB8 259 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 SMDT1Q9H4I9 107 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 OBP2BQ9NPH6 170 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 ZFYVE16Q7Z3T8 1539 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 INSIG1O15503 277 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 ZXDAP98168 799 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 RNF111Q6ZNA4 994 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 ZBTB44Q8NCP5 570 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 NXPE3Q969Y0 559 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 MEIOCA2RUB1 952 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 F8VP50 259 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 TCN2P20062 427 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 COX5AP20674 150 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 CXADRP78310 365 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 SFRP4Q6FHJ7 346 aaPredicted RBP8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 DEFB128Q7Z7B8 93 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 PRSS3P2Q8NHM4 247 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 PRELID3AQ96N28 172 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 MCHR1Q99705 422 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 GABRQQ9UN88 632 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 MN1Q10571 1320 aaPredicted RBP8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 PMS2P2O95744 297 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 DUSP1P28562 367 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 SAMD13Q5VXD3 122 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 BRAT1Q6PJG6 821 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 TMEM107Q6UX40 140 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 LRRTM4Q86VH4 590 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 ZNF485Q8NCK3 441 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 SENP8Q96LD8 212 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 LMF1Q96S06 567 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 ABHD6Q9BV23 337 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 TMEM231Q9H6L2 316 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 SYNPO2LQ9H987 977 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 ASIC5Q9NY37 505 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 C4BPAP04003 597 aaKnown RBP8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 GTDC1Q4AE62 458 aa8.05□□□□□ -1.12
CACNA1C-220ENST00000399655 ZNF684Q5T5D7 378 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms