RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 E7EQ34 232 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 EEDO75530 441 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 ALX3O95076 343 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 ITGB2P05107 769 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 RD3LP0DJH9 198 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 MATN1P21941 496 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 CD79BP40259 229 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 OR1E2P47887 323 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 CD97P48960 835 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 ERVS71-1P61550 626 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 NHLH1Q02575 133 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 GRM7Q14831 915 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 P2RY14Q15391 338 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 EFNB3Q15768 340 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 BTNL8Q6UX41 500 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 IL17RELQ6ZVW7 336 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 TRAM1L1Q8N609 369 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 ZNF740Q8NDX6 193 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 TMEM104Q8NE00 496 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 CATSPER1Q8NEC5 780 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 OR2AP1Q8NGE2 309 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 DOK4Q8TEW6 326 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 HOPXQ9BPY8 73 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 NDC1Q9BTX1 674 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 TMPRSS13Q9BYE2 586 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 SLC22A4Q9H015 551 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 ZNF696Q9H7X3 374 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 CXorf36Q9H7Y0 433 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 CXorf21Q9HAI6 301 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 ELOVL3Q9HB03 270 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 OR2S2Q9NQN1 319 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 NLGN3Q9NZ94 848 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 MYEF2Q9P2K5 600 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 RSL24D1Q9UHA3 163 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 GNPTGQ9UJJ9 305 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 DOCK9Q9BZ29 2069 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 FNDC1Q4ZHG4 1894 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 SPTBP11277 2137 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 NOTOA8MTQ0 251 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 OR1F1O43749 312 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 SCELO95171 688 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 IGSF6O95976 241 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 DANCRP0C864 163 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 NR2F6P10588 404 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 CTSAP10619 480 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 CD22P20273 847 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 FBLP22087 321 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 GNPDA1P46926 289 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 NPBWR1P48145 328 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 CCL11P51671 97 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 CHRNB3Q05901 458 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 CNTN1Q12860 1018 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 CTU2Q2VPK5 515 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 XKR6Q5GH73 641 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 LCN8Q6JVE9 175 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 C22orf39Q6P5X5 142 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 RNF144BQ7Z419 303 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 MEX3DQ86XN8 651 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 BOD1L2Q8IYS8 172 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 BCL6BQ8N143 479 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 ISOC1Q96CN7 298 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 DHRS9Q9BPW9 319 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 TRIM15Q9C019 465 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 AMBRA1Q9C0C7 1298 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 VCX3AQ9NNX9 186 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 SPATA6Q9NWH7 488 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 NUDT4Q9NZJ9 180 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 COPS7AQ9UBW8 275 aa5.67□□□□□ -1.5
TRAPPC13-202ENST00000399438 NOTCH4Q99466 2003 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 CXCR6O00574 342 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 DSCR3O14972 297 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 PFDN1O60925 122 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 GMNNO75496 209 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 GP1BAP07359 652 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 LAMP1P11279 417 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 EPCAMP16422 314 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 SDC1P18827 310 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 APEX1P27695 318 aaKnown RBP5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 SERPINB1P30740 379 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 MAS1LP35410 378 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 CFHR2P36980 270 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 OR3A1P47881 315 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 GPR143P51810 404 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 NUDT6P53370 316 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 MLLT10P55197 1068 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 IL5RAQ01344 420 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 TLE3Q04726 772 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 HSPB3Q12988 150 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 ATP6AP1Q15904 470 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 RHBDD2Q6NTF9 364 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 ENPP7Q6UWV6 458 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 SIGLEC15Q6ZMC9 328 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 PRR23BQ6ZRT6 265 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 SLC16A9Q7RTY1 509 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 SLC22A16Q86VW1 577 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 KLBQ86Z14 1044 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 TMEM123Q8N131 208 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 SLC39A11Q8N1S5 342 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 SCAIQ8N9R8 606 aa5.66□□□□□ -1.5
TRAPPC13-202ENST00000399438 DCAF4L2Q8NA75 395 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms