RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 NUDT14O95848 222 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 APEHP13798 732 aaKnown RBP13.78□□□□□ -0.2
COL25A1-201ENST00000399126 CD36P16671 472 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 GRK5P34947 590 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 EGR4Q05215 589 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 NFATC3Q12968 1075 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 NCF4Q15080 339 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 PXDC1Q5TGL8 231 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 AADACL4Q5VUY2 407 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 ZNF440Q8IYI8 595 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 OR52L1Q8NGH7 329 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 RNFT2Q96EX2 444 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 SNX18Q96RF0 628 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 TAPBPLQ9BX59 468 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 LAT2Q9GZY6 243 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 DIABLOQ9NR28 239 aa13.78□□□□□ -0.2
COL25A1-201ENST00000399126 OR6C70A6NIJ9 312 aa13.77□□□□□ -0.2
COL25A1-201ENST00000399126 ELOA3DA6NLF2 546 aaPredicted RBP13.77□□□□□ -0.2
COL25A1-201ENST00000399126 KDM4EB2RXH2 506 aaPredicted RBP13.77□□□□□ -0.2
COL25A1-201ENST00000399126 PRODHO43272 600 aa13.77□□□□□ -0.2
COL25A1-201ENST00000399126 TACR3P29371 465 aa13.77□□□□□ -0.2
COL25A1-201ENST00000399126 ETV1P50549 477 aa13.77□□□□□ -0.2
COL25A1-201ENST00000399126 NRG3P56975 720 aa13.77□□□□□ -0.2
COL25A1-201ENST00000399126 RPS18P62269 152 aaKnown RBP13.77□□□□□ -0.2
COL25A1-201ENST00000399126 MRPS15P82914 257 aaKnown RBP13.77□□□□□ -0.2
COL25A1-201ENST00000399126 ODF1Q14990 250 aa13.77□□□□□ -0.2
COL25A1-201ENST00000399126 PCOLCEQ15113 449 aa13.77□□□□□ -0.2
COL25A1-201ENST00000399126 ELOA3BQ3SY89 546 aa13.77□□□□□ -0.2
COL25A1-201ENST00000399126 MEDAGQ5VYS4 303 aa13.77□□□□□ -0.2
COL25A1-201ENST00000399126 ZNF517Q6ZMY9 492 aaPredicted RBP13.77□□□□□ -0.2
COL25A1-201ENST00000399126 PLEKHG7Q6ZR37 379 aa13.77□□□□□ -0.2
COL25A1-201ENST00000399126 SLC46A3Q7Z3Q1 461 aa13.77□□□□□ -0.2
COL25A1-201ENST00000399126 ELOA3Q8NG57 546 aa13.77□□□□□ -0.2
COL25A1-201ENST00000399126 DUSP19Q8WTR2 217 aa13.77□□□□□ -0.2
COL25A1-201ENST00000399126 TMEM80Q96HE8 168 aa13.77□□□□□ -0.2
COL25A1-201ENST00000399126 WDR12Q9GZL7 423 aaKnown RBP13.77□□□□□ -0.2
COL25A1-201ENST00000399126 WDR54Q9H977 334 aa13.77□□□□□ -0.2
COL25A1-201ENST00000399126 PISDQ9UG56 409 aa13.77□□□□□ -0.2
COL25A1-201ENST00000399126 NUP50Q9UKX7 468 aa13.77□□□□□ -0.2
COL25A1-201ENST00000399126 ZFHX4Q86UP3 3567 aa13.77□□□□□ -0.2
COL25A1-201ENST00000399126 ATP6V1G2-DDX39BF2Z307 99 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 PPM1BO75688 479 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 OR2J2O76002 312 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 STK17BO94768 372 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 RCBTB2O95199 551 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 BCL10O95999 233 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 ZNF806P0C7X5 589 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 SOX6P35712 828 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 CDH11P55287 796 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 VBP1P61758 197 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 NCS1P62166 190 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 POLR2GP62487 172 aaKnown RBP eCLIP13.77□□□□□ -0.21
COL25A1-201ENST00000399126 FOXK2Q01167 660 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 SOWAHCQ53LP3 525 aaPredicted RBP13.77□□□□□ -0.21
COL25A1-201ENST00000399126 P2RY8Q86VZ1 359 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 LNX2Q8N448 690 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 CYB561A3Q8NBI2 242 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 SUMF1Q8NBK3 374 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 SGTBQ96EQ0 304 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 NPAS1Q99742 590 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 IFT22Q9H7X7 185 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 HMG20AQ9NP66 347 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 TNFRSF10DQ9UBN6 386 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 FBXL4Q9UKA2 621 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 ZFHX2Q9C0A1 2572 aaPredicted RBP13.77□□□□□ -0.21
COL25A1-201ENST00000399126 C4orf47A7E2U8 309 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 HCN1O60741 890 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 GABARAPO95166 117 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 ICAM2P13598 275 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 NOS3P29474 1203 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 BTBD16Q32M84 506 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 ARMCX4Q5H9R4 360 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 RAB11FIP2Q7L804 512 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 PLPP7Q8NBV4 271 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 PSD4Q8NDX1 1056 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 OR4F15Q8NGB8 312 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 NUBPLQ8TB37 319 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 NDNFQ8TB73 568 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 ADAM18Q9Y3Q7 739 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 HS3ST3B1Q9Y662 390 aa13.77□□□□□ -0.21
COL25A1-201ENST00000399126 MUC6Q6W4X9 2439 aa13.76□□□□□ -0.21
COL25A1-201ENST00000399126 A0A1W2PQD3 144 aa13.76□□□□□ -0.21
COL25A1-201ENST00000399126 B4E171 279 aa13.76□□□□□ -0.21
COL25A1-201ENST00000399126 MCIDASD6RGH6 385 aa13.76□□□□□ -0.21
COL25A1-201ENST00000399126 CDC40O60508 579 aaKnown RBP eCLIP13.76□□□□□ -0.21
COL25A1-201ENST00000399126 CSO75390 466 aaKnown RBP13.76□□□□□ -0.21
COL25A1-201ENST00000399126 KRT8P05787 483 aa13.76□□□□□ -0.21
COL25A1-201ENST00000399126 CLUP10909 449 aa13.76□□□□□ -0.21
COL25A1-201ENST00000399126 CD79BP40259 229 aa13.76□□□□□ -0.21
COL25A1-201ENST00000399126 SLC1A3P43003 542 aa13.76□□□□□ -0.21
COL25A1-201ENST00000399126 MTNR1AP48039 350 aa13.76□□□□□ -0.21
COL25A1-201ENST00000399126 C1QL3Q5VWW1 255 aa13.76□□□□□ -0.21
COL25A1-201ENST00000399126 TIPARPQ7Z3E1 657 aaKnown RBP13.76□□□□□ -0.21
COL25A1-201ENST00000399126 FCGR1BQ92637 280 aa13.76□□□□□ -0.21
COL25A1-201ENST00000399126 KTI12Q96EK9 354 aaPredicted RBP13.76□□□□□ -0.21
COL25A1-201ENST00000399126 LRFN5Q96NI6 719 aa13.76□□□□□ -0.21
COL25A1-201ENST00000399126 NARFLQ9H6Q4 476 aa13.76□□□□□ -0.21
COL25A1-201ENST00000399126 GPN2Q9H9Y4 310 aaPredicted RBP13.76□□□□□ -0.21
COL25A1-201ENST00000399126 LIN7BQ9HAP6 207 aa13.76□□□□□ -0.21
COL25A1-201ENST00000399126 PPP1R14DQ9NXH3 145 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms