RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 SLC25A36Q96CQ1 311 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 RSRC1Q96IZ7 334 aaKnown RBP11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 HS6ST2Q96MM7 605 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ZNF347Q96SE7 839 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ZNF587Q96SQ5 575 aaPredicted RBP11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 EPYCQ99645 322 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 GPA33Q99795 319 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 TIGARQ9NQ88 270 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 KLHL13Q9P2N7 655 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 B3GAT1Q9P2W7 334 aa11.06□□□□□ -0.64
HLA-DQB1-203ENST00000399082 FASNP49327 2511 aaKnown RBP11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 IGKV3D-15A0A087WSY6 115 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 SH3PXD2BA1X283 911 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 H3BNX3 289 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 CDC42EP2O14613 210 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 KLF4O43474 513 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 OR2T1O43869 369 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 SS18L1O75177 396 aaPredicted RBP11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 TIPRLO75663 272 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 OR7A10O76100 309 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 GADD45GO95257 159 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 HPRP00739 348 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 TSPAN19P0C672 248 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ASAH2BP0C7U1 165 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 TMIGD3P0DMS9 266 aaPredicted RBP11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 FCGR2AP12318 317 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 EDNRAP25101 427 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 NTF4P34130 210 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 OMPP47874 163 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 IST1P53990 364 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 PRKCDQ05655 676 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 FHL1Q13642 323 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 SLC17A1Q14916 467 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 OTUD3Q5T2D3 398 aaPredicted RBP11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 VWA1Q6PCB0 445 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 NHLRC1Q6VVB1 395 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ZNF730Q6ZMV8 503 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 MBOAT2Q6ZWT7 520 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 P4HA3Q7Z4N8 544 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 RELL2Q8NC24 303 aaPredicted RBP11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 OR4K5Q8NGD3 323 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 LIPHQ8WWY8 451 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 RND1Q92730 232 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 TM9SF2Q99805 663 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 TAPBPLQ9BX59 468 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 FKRPQ9H9S5 495 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 CHST11Q9NPF2 352 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ARMC1Q9NVT9 282 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 PLA2G2EQ9NZK7 142 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 MED31Q9Y3C7 131 aa11.05□□□□□ -0.64
HLA-DQB1-203ENST00000399082 DOPEY1Q5JWR5 2465 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 MS4A18H0YCH9 400 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 EIF1BO60739 113 aaKnown RBP11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 MT-ATP6P00846 226 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 CST1P01037 141 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 CGAP01215 116 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 IL2RAP01589 272 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 IFI30P13284 250 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ZNF26P17031 533 aaPredicted RBP11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 AGTR1P30556 359 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 IFNA8P32881 189 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 GPR4P46093 362 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 SLC16A1P53985 500 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 SIRPAP78324 504 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 RASGEF1BQ0VAM2 473 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 LAPTM4AQ15012 233 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 MS4A18Q3C1V0 323 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ZNF770Q6IQ21 691 aaPredicted RBP11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 HMBOX1Q6NT76 420 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 NUFIP2Q7Z417 695 aaKnown RBP11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ZER1Q7Z7L7 766 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 WDFY1Q8IWB7 410 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 TUSC5Q8IXB3 177 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 RNF113BQ8IZP6 322 aaKnown RBP11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 SLC43A2Q8N370 569 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 KDM8Q8N371 416 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ZIC4Q8N9L1 334 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ADPRHL1Q8NDY3 354 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 PYDC1Q8WXC3 89 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 BPIFA2Q96DR5 249 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ZHX1-C8orf76Q96EF9 292 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 SGTBQ96EQ0 304 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 GMPPAQ96IJ6 420 aaPredicted RBP11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ZFP3Q96NJ6 502 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 RAB3IPQ96QF0 476 aaPredicted RBP11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ALPK1Q96QP1 1244 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 PRRG4Q9BZD6 226 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 BCO1Q9HAY6 547 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 NTN4Q9HB63 628 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 MRPL39Q9NYK5 338 aaKnown RBP11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 TAS2R5Q9NYW4 299 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ZNF229Q9UJW7 825 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 CORINQ9Y5Q5 1042 aa11.04□□□□□ -0.64
HLA-DQB1-203ENST00000399082 FREM1Q5H8C1 2179 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 HSPB2A8KAH6 182 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 TNFRSF11BO00300 401 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 PLPP3O14495 311 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 TRAF3IP2O43734 574 aaPredicted RBP11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ENTPD5O75356 428 aa11.03□□□□□ -0.64
HLA-DQB1-203ENST00000399082 KRT36O76013 467 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms