RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 BOLLQ8N9W6 283 aaKnown RBP7.77□□□□□ -1.16
SPTLC3-201ENST00000399002 OLIG1Q8TAK6 271 aa7.77□□□□□ -1.16
SPTLC3-201ENST00000399002 SCPEP1Q9HB40 452 aa7.77□□□□□ -1.16
SPTLC3-201ENST00000399002 PRDM9Q9NQV7 894 aa7.77□□□□□ -1.16
SPTLC3-201ENST00000399002 PTRH2Q9Y3E5 179 aaKnown RBP7.77□□□□□ -1.16
SPTLC3-201ENST00000399002 ZNF780AO75290 641 aaPredicted RBP7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 BMP4P12644 408 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 IL3RAP26951 378 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 PRDX3P30048 256 aaKnown RBP7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 SSTP61278 116 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 RAB11AP62491 216 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 CXADRP78310 365 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 C17orf67Q0P5P2 114 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 ZNF266Q14584 549 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 VASNQ6EMK4 673 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 SLC22A25Q6T423 547 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 ENTHD1Q8IYW4 607 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 NXPE3Q969Y0 559 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 SGK3Q96BR1 496 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 LMAN1LQ9HAT1 526 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 TXNL4BQ9NX01 149 aaKnown RBP7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 A0A1B0GUL6 1792 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 RREB1Q92766 1687 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 TSPAN11A1L157 253 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 FAM227AF5H4B4 570 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 SMAD6O43541 496 aaKnown RBP7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 PSMB1P20618 241 aaKnown RBP7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 ZNF136P52737 540 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 CTSCP53634 463 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 EXT1Q16394 746 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 C14orf28Q4W4Y0 310 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 SAXO2Q658L1 398 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 KDM4DQ6B0I6 523 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 ZNF546Q86UE3 836 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 PPP1R3BQ86XI6 285 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 MRPL43Q8N983 215 aaKnown RBP7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 OR51A2Q8NGJ7 313 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 OR52I1Q8NGK6 324 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 PAQR8Q8TEZ7 354 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 RNF141Q8WVD5 230 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 INSM2Q96T92 566 aaPredicted RBP7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 SLC25A21Q9BQT8 299 aaPredicted RBP7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 SORBS1Q9BX66 1292 aaKnown RBP7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 ULBP2Q9BZM5 246 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 CACFD1Q9UGQ2 172 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 OR2A25A4D2G3 310 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 H3BML4 177 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 WNT11O96014 354 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 RPS25P62851 125 aaKnown RBP7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 ZNF628Q5EBL2 1059 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 DND1Q8IYX4 353 aaKnown RBP7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 C12orf76Q8N812 135 aaPredicted RBP7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 ABHD4Q8TB40 342 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 TM4SF18Q96CE8 201 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 LCORQ96JN0 433 aaPredicted RBP7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 MAP3K3Q99759 626 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 NUDT9Q9BW91 350 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 GABARAPL3Q9BY60 117 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 C5AR2Q9P296 337 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 PLEKHM1Q9Y4G2 1056 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 CEBPZOSA8MTT3 80 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 ZNF593O00488 134 aaPredicted RBP7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 TAAR5O14804 337 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 SERPINA2P20848 420 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 CD38P28907 300 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 CD79BP40259 229 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 CAMK2BQ13554 666 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 SMIM15Q7Z3B0 74 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 RAB3CQ96E17 227 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 SGCZQ96LD1 299 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 RTP3Q9BQQ7 232 aa7.77□□□□□ -1.17
SPTLC3-201ENST00000399002 NSG1A0A0A6YYJ2 146 aa7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 TMEM129A0AVI4 362 aa7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 PLSCR5A0PG75 271 aa7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 TUBAL3A6NHL2 446 aa7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 LDB3O75112 727 aa7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 RGS11O94810 467 aa7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 GLCEO94923 617 aa7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 CPNE6O95741 557 aa7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 EEF1A1P68104 462 aaKnown RBP7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 ZNF74Q16587 644 aa7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 SLC48A1Q6P1K1 146 aa7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 CYB561A3Q8NBI2 242 aa7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 OR6M1Q8NGM8 313 aa7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 DAZAP1Q96EP5 407 aaKnown RBP7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 ALG12Q9BV10 488 aa7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 PLCXD1Q9NUJ7 323 aa7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 MCRIP1C9JLW8 97 aa7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 FOXD2O60548 495 aaPredicted RBP7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 SERPINA7P05543 415 aa7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 THBS1P07996 1170 aa7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 METTL15P1P0C7V9 234 aa7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 ACHEP22303 614 aa7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 HLA-DMAP28067 261 aa7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 SFTPDP35247 375 aa7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 GPLD1P80108 840 aa7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 EXOSC7Q15024 291 aaKnown RBP7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 DEFB110Q30KQ9 67 aa7.76□□□□□ -1.17
SPTLC3-201ENST00000399002 GLYR1Q49A26 553 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms