RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 WNT1P04628 370 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 PROS1P07225 676 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 PTBP1P26599 531 aaKnown RBP eCLIP16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 RAB25P57735 213 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ZBTB44Q8NCP5 570 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 C7orf57Q8NEG2 295 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 OR51Q1Q8NH59 317 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 LMX1AQ8TE12 382 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 RASD2Q96D21 266 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 PELI1Q96FA3 418 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 TCTN2Q96GX1 697 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 TGM7Q96PF1 710 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ALG5Q9Y673 324 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ALPK2Q86TB3 2170 aa16.79■□□□□ 0.28
CHRFAM7A-202ENST00000397827 A0A0B4J203 849 aa16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 SLC22A5O76082 557 aa16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 C1QBP02746 253 aa16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 GPR143P51810 404 aa16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 NRG3P56975 720 aa16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ERVK-25P63136 954 aa16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 POU4F2Q12837 409 aa16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 LURAP1LQ8IV03 231 aa16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ZNF321PQ8N8H1 164 aa16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ZNF615Q8N8J6 731 aa16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 DUSP18Q8NEJ0 188 aa16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 TRMT10AQ8TBZ6 339 aaKnown RBP16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 SLC2A12Q8TD20 617 aa16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 C3orf49Q96BT1 292 aa16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 UBL7Q96S82 380 aaPredicted RBP16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 CNN2Q99439 309 aaKnown RBP16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 SLC38A3Q99624 504 aa16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 NIPAL2Q9H841 368 aa16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 EVA1AQ9H8M9 152 aa16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 IGHV5-51A0A0C4DH38 117 aa16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 FAM171A2A8MVW0 826 aa16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 PSMD9O00233 223 aa16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 SELENOFO60613 162 aa16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 CD53P19397 219 aa16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 CCR4P51679 360 aa16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 FUT7Q11130 342 aa16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 SF3A2Q15428 464 aaKnown RBP16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 PRSS42Q7Z5A4 293 aa16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 OR6K6Q8NGW6 343 aa16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 THAP4Q8WY91 577 aa16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ZC3HAV1LQ96H79 300 aaKnown RBP16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 SPRTNQ9H040 489 aaPredicted RBP16.78■□□□□ 0.28
CHRFAM7A-202ENST00000397827 OR6C68A6NDL8 312 aa16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ALAS2P22557 587 aa16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 SKP1P63208 163 aa16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 TRAM1Q15629 374 aa16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 CD226Q15762 336 aa16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ZBTB37Q5TC79 503 aa16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 OR6C4Q8NGE1 309 aa16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 SNX33Q8WV41 574 aa16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 GFM1Q96RP9 751 aaKnown RBP16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 GNG8Q9UK08 70 aa16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 COPS3Q9UNS2 423 aa16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 EFCAB7A8K855 629 aa16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 CHURC1-FNTBB4DL54 471 aa16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 OIP5O43482 229 aa16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 GRPRP30550 384 aa16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 PSMB10P40306 273 aa16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 FNTBP49356 437 aa16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 GDI2P50395 445 aaKnown RBP16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 CBLN3Q6UW01 205 aa16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 MED25Q71SY5 747 aa16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 SLC35F2Q8IXU6 374 aa16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 GPR135Q8IZ08 494 aa16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 NPEPL1Q8NDH3 523 aa16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ABHD1Q96SE0 405 aa16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 PDCD1LG2Q9BQ51 273 aa16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 THAP7Q9BT49 309 aaPredicted RBP16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 KLHL21Q9UJP4 597 aa16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ICAM5Q9UMF0 924 aa16.77■□□□□ 0.28
CHRFAM7A-202ENST00000397827 BLOC1S5-TXNDC5H3BN57 136 aa16.77■□□□□ 0.27
CHRFAM7A-202ENST00000397827 CLPSP04118 112 aa16.77■□□□□ 0.27
CHRFAM7A-202ENST00000397827 GUSBP08236 651 aa16.77■□□□□ 0.27
CHRFAM7A-202ENST00000397827 RAB3BP20337 219 aa16.77■□□□□ 0.27
CHRFAM7A-202ENST00000397827 AGFG1P52594 562 aaKnown RBP16.77■□□□□ 0.27
CHRFAM7A-202ENST00000397827 KCNAB1Q14722 419 aa16.77■□□□□ 0.27
CHRFAM7A-202ENST00000397827 PON3Q15166 354 aa16.77■□□□□ 0.27
CHRFAM7A-202ENST00000397827 NKAIN2Q5VXU1 208 aa16.77■□□□□ 0.27
CHRFAM7A-202ENST00000397827 TPRA1Q86W33 373 aa16.77■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ZSCAN1Q8NBB4 408 aa16.77■□□□□ 0.27
CHRFAM7A-202ENST00000397827 MOSPD2Q8NHP6 518 aa16.77■□□□□ 0.27
CHRFAM7A-202ENST00000397827 AKAP1Q92667 903 aaKnown RBP eCLIP16.77■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ZNF346Q9UL40 294 aaKnown RBP16.77■□□□□ 0.27
CHRFAM7A-202ENST00000397827 C17orf105B2RV13 164 aa16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 OR2T7P0C7T2 308 aa16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 FASLGP48023 281 aa16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 GABRA4P48169 554 aa16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 MS4A15Q8N5U1 240 aa16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 OR4D9Q8NGE8 314 aa16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 OR2T27Q8NH04 317 aa16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 PCNPQ8WW12 178 aaKnown RBP16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 KCTD12Q96CX2 325 aaKnown RBP16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ORAI1Q96D31 301 aa16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 IGKV1D-42A0A075B6H8 117 aa16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 IDSB3KWA1 339 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms