RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 SPICQ8N5J4 248 aa4.64□□□□□ -1.67
SSR1-202ENST00000397511 FBXO15Q8NCQ5 510 aaPredicted RBP4.64□□□□□ -1.67
SSR1-202ENST00000397511 MORN4Q8NDC4 146 aa4.64□□□□□ -1.67
SSR1-202ENST00000397511 OR51A7Q8NH64 312 aa4.64□□□□□ -1.67
SSR1-202ENST00000397511 THAP6Q8TBB0 222 aa4.64□□□□□ -1.67
SSR1-202ENST00000397511 NR4A3Q92570 626 aa4.64□□□□□ -1.67
SSR1-202ENST00000397511 RAB7BQ96AH8 199 aa4.64□□□□□ -1.67
SSR1-202ENST00000397511 LINC00615Q96LM1 132 aaPredicted RBP4.64□□□□□ -1.67
SSR1-202ENST00000397511 SAMD8Q96LT4 415 aa4.64□□□□□ -1.67
SSR1-202ENST00000397511 TMEM68Q96MH6 324 aa4.64□□□□□ -1.67
SSR1-202ENST00000397511 CCDC86Q9H6F5 360 aaKnown RBP4.64□□□□□ -1.67
SSR1-202ENST00000397511 NLGN3Q9NZ94 848 aa4.64□□□□□ -1.67
SSR1-202ENST00000397511 FBXL4Q9UKA2 621 aa4.64□□□□□ -1.67
SSR1-202ENST00000397511 CHST2Q9Y4C5 530 aa4.64□□□□□ -1.67
SSR1-202ENST00000397511 DMRT1Q9Y5R6 373 aa4.64□□□□□ -1.67
SSR1-202ENST00000397511 SEC16AO15027 2179 aa4.64□□□□□ -1.67
SSR1-202ENST00000397511 A0A1B0GWJ7 208 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 IRGMA1A4Y4 181 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 OR6C68A6NDL8 312 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 GPR31O00270 319 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 PEX12O00623 359 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 ARPC5O15511 151 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 CLN5O75503 358 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 ITGA10O75578 1167 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 ZIC2O95409 532 aaPredicted RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 THY1P04216 161 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 CD63P08962 238 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 ZNF888P0CJ79 500 aaPredicted RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 GAAP10253 952 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 TFPIP10646 304 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 TBXA2RP21731 343 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 PEBP1P30086 187 aaKnown RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 MPIP34949 423 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 GPX4P36969 197 aaPredicted RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 EIF2S3P41091 472 aaKnown RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 PSMA6P60900 246 aaKnown RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 REEP5Q00765 189 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 ECH1Q13011 328 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 SSX2Q16385 188 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 OCLNQ16625 522 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 SLC36A2Q495M3 483 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 OR2B11Q5JQS5 317 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 ABHD17CQ6PCB6 329 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 CD200R1LQ6Q8B3 271 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 ENPP7Q6UWV6 458 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 MTSS1LQ765P7 747 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 SSX9Q7RTT3 188 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 SERPINA12Q8IW75 414 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 CMIPQ8IY22 773 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 ARMC10Q8N2F6 343 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 MEIOBQ8N635 442 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 OR2L3Q8NG85 312 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 OR7G2Q8NG99 324 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 OR5T3Q8NGG3 340 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 OR4Q3Q8NH05 313 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 PFN4Q8NHR9 129 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 PHOSPHO1Q8TCT1 267 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 SPRYD4Q8WW59 207 aaPredicted RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 LCN9Q8WX39 176 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 OTUB2Q96DC9 234 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 RBM18Q96H35 190 aaKnown RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 COX14Q96I36 57 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 LCORQ96JN0 433 aaPredicted RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 MCHR1Q99705 422 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 WDR77Q9BQA1 342 aaPredicted RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 FAIM2Q9BWQ8 316 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 HCAR1Q9BXC0 346 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 GSDMCQ9BYG8 508 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 C20orf85Q9H1P6 137 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 SLC38A1Q9H2H9 487 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 SEBOXQ9HB31 216 aaPredicted RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 FGF22Q9HCT0 170 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 IL23AQ9NPF7 189 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 PRDM7Q9NQW5 492 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 C20orf141Q9NUB4 165 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 NKIRAS2Q9NYR9 191 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 USP36Q9P275 1121 aaKnown RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 TBC1D29Q9UFV1 150 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 ZNF780BQ9Y6R6 833 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 ASCC3Q8N3C0 2202 aaKnown RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 TMEM129A0AVI4 362 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 HMSDA8MTL9 139 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 PSMD9O00233 223 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 UBE2CO00762 179 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 HIST1H2ABP04908 130 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 KLK3P07288 261 aaPredicted RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 LIMS3P0CW19 117 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 LIMS4P0CW20 117 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 SAGP10523 405 aaPredicted RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 CBR1P16152 277 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 CSNK2A2P19784 350 aaPredicted RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 DRD5P21918 477 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 GDI1P31150 447 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 ACVR1BP36896 505 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 GCGRP47871 477 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 KHKP50053 298 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 HTRA4P83105 476 aaPredicted RBP4.63□□□□□ -1.67
SSR1-202ENST00000397511 PITPNAQ00169 270 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 SLC3A1Q07837 685 aa4.63□□□□□ -1.67
SSR1-202ENST00000397511 SNTB2Q13425 540 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms