RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 FAM27E3Q08E93 113 aa18.81■□□□□ 0.6
TSPAN4-206ENST00000397408 FOXD4Q12950 439 aaPredicted RBP18.81■□□□□ 0.6
TSPAN4-206ENST00000397408 TMEM225Q6GV28 225 aa18.81■□□□□ 0.6
TSPAN4-206ENST00000397408 NKAIN4Q8IVV8 208 aa18.81■□□□□ 0.6
TSPAN4-206ENST00000397408 ZNF417Q8TAU3 575 aa18.81■□□□□ 0.6
TSPAN4-206ENST00000397408 ZNF587Q96SQ5 575 aaPredicted RBP18.81■□□□□ 0.6
TSPAN4-206ENST00000397408 ELOVL5Q9NYP7 299 aa18.81■□□□□ 0.6
TSPAN4-206ENST00000397408 NOSIPQ9Y314 301 aaKnown RBP18.81■□□□□ 0.6
TSPAN4-206ENST00000397408 FLVCR1Q9Y5Y0 555 aa18.81■□□□□ 0.6
TSPAN4-206ENST00000397408 CELSR2Q9HCU4 2923 aa18.8■□□□□ 0.6
TSPAN4-206ENST00000397408 J3KTA2 159 aa18.8■□□□□ 0.6
TSPAN4-206ENST00000397408 THRBP10828 461 aa18.8■□□□□ 0.6
TSPAN4-206ENST00000397408 EDNRAP25101 427 aa18.8■□□□□ 0.6
TSPAN4-206ENST00000397408 IFNA8P32881 189 aa18.8■□□□□ 0.6
TSPAN4-206ENST00000397408 PEX19P40855 299 aa18.8■□□□□ 0.6
TSPAN4-206ENST00000397408 LTBQ06643 244 aa18.8■□□□□ 0.6
TSPAN4-206ENST00000397408 MFSD13AQ14CX5 517 aa18.8■□□□□ 0.6
TSPAN4-206ENST00000397408 BEND4Q6ZU67 534 aa18.8■□□□□ 0.6
TSPAN4-206ENST00000397408 OR9K2Q8NGE7 335 aa18.8■□□□□ 0.6
TSPAN4-206ENST00000397408 TMEM255BQ8WV15 326 aa18.8■□□□□ 0.6
TSPAN4-206ENST00000397408 MOGAT1Q96PD6 335 aa18.8■□□□□ 0.6
TSPAN4-206ENST00000397408 SF3B5Q9BWJ5 86 aaKnown RBP18.8■□□□□ 0.6
TSPAN4-206ENST00000397408 SLC19A3Q9BZV2 496 aa18.8■□□□□ 0.6
TSPAN4-206ENST00000397408 RASD1Q9Y272 281 aa18.8■□□□□ 0.6
TSPAN4-206ENST00000397408 LRRN3E7EW58 273 aa18.79■□□□□ 0.6
TSPAN4-206ENST00000397408 VAMP5O95183 116 aa18.79■□□□□ 0.6
TSPAN4-206ENST00000397408 CCKARP32238 428 aa18.79■□□□□ 0.6
TSPAN4-206ENST00000397408 KIR2DL3P43628 341 aa18.79■□□□□ 0.6
TSPAN4-206ENST00000397408 OR3A2P47893 321 aa18.79■□□□□ 0.6
TSPAN4-206ENST00000397408 ST3GAL3Q11203 375 aa18.79■□□□□ 0.6
TSPAN4-206ENST00000397408 CASP12Q6UXS9 341 aa18.79■□□□□ 0.6
TSPAN4-206ENST00000397408 ZNF100Q8IYN0 542 aa18.79■□□□□ 0.6
TSPAN4-206ENST00000397408 OFCC1Q8IZS5 231 aa18.79■□□□□ 0.6
TSPAN4-206ENST00000397408 ASPNQ9BXN1 380 aa18.79■□□□□ 0.6
TSPAN4-206ENST00000397408 RHCGQ9UBD6 479 aa18.79■□□□□ 0.6
TSPAN4-206ENST00000397408 CORINQ9Y5Q5 1042 aa18.79■□□□□ 0.6
TSPAN4-206ENST00000397408 TUBAL3A6NHL2 446 aa18.78■□□□□ 0.6
TSPAN4-206ENST00000397408 FFAR1O14842 300 aa18.78■□□□□ 0.6
TSPAN4-206ENST00000397408 MT-ATP6P00846 226 aa18.78■□□□□ 0.6
TSPAN4-206ENST00000397408 ATP6V1B2P21281 511 aa18.78■□□□□ 0.6
TSPAN4-206ENST00000397408 RBM34P42696 430 aaKnown RBP18.78■□□□□ 0.6
TSPAN4-206ENST00000397408 UGT2B15P54855 530 aa18.78■□□□□ 0.6
TSPAN4-206ENST00000397408 DNAL1Q4LDG9 190 aa18.78■□□□□ 0.6
TSPAN4-206ENST00000397408 CYP2R1Q6VVX0 501 aa18.78■□□□□ 0.6
TSPAN4-206ENST00000397408 H1FNTQ75WM6 255 aaPredicted RBP18.78■□□□□ 0.6
TSPAN4-206ENST00000397408 KDM8Q8N371 416 aa18.78■□□□□ 0.6
TSPAN4-206ENST00000397408 TMEM239Q8WW34 195 aa18.78■□□□□ 0.6
TSPAN4-206ENST00000397408 APH1AQ96BI3 265 aa18.78■□□□□ 0.6
TSPAN4-206ENST00000397408 CCDC124Q96CT7 223 aaKnown RBP18.78■□□□□ 0.6
TSPAN4-206ENST00000397408 CLPTM1LQ96KA5 538 aa18.78■□□□□ 0.6
TSPAN4-206ENST00000397408 THTPAQ9BU02 230 aa18.78■□□□□ 0.6
TSPAN4-206ENST00000397408 FNDC11Q9BVV2 318 aa18.78■□□□□ 0.6
TSPAN4-206ENST00000397408 SLC24A3Q9HC58 644 aa18.78■□□□□ 0.6
TSPAN4-206ENST00000397408 CRIM1Q9NZV1 1036 aa18.78■□□□□ 0.6
TSPAN4-206ENST00000397408 ACTR3BQ9P1U1 418 aa18.78■□□□□ 0.6
TSPAN4-206ENST00000397408 PRSS50Q9UI38 385 aa18.78■□□□□ 0.6
TSPAN4-206ENST00000397408 B3GALT5Q9Y2C3 310 aa18.78■□□□□ 0.6
TSPAN4-206ENST00000397408 ENPP4Q9Y6X5 453 aa18.78■□□□□ 0.6
TSPAN4-206ENST00000397408 GYG2O15488 501 aa18.77■□□□□ 0.6
TSPAN4-206ENST00000397408 MRPL33O75394 65 aaKnown RBP18.77■□□□□ 0.6
TSPAN4-206ENST00000397408 CH25HO95992 272 aa18.77■□□□□ 0.6
TSPAN4-206ENST00000397408 NQO1P15559 274 aaKnown RBP18.77■□□□□ 0.6
TSPAN4-206ENST00000397408 FUT4P22083 530 aa18.77■□□□□ 0.6
TSPAN4-206ENST00000397408 NTF4P34130 210 aa18.77■□□□□ 0.6
TSPAN4-206ENST00000397408 UGT2B10P36537 528 aa18.77■□□□□ 0.6
TSPAN4-206ENST00000397408 PCYT1AP49585 367 aa18.77■□□□□ 0.6
TSPAN4-206ENST00000397408 ZNF74Q16587 644 aa18.77■□□□□ 0.6
TSPAN4-206ENST00000397408 TSEN54Q7Z6J9 526 aaKnown RBP18.77■□□□□ 0.6
TSPAN4-206ENST00000397408 CYP4Z1Q86W10 505 aa18.77■□□□□ 0.6
TSPAN4-206ENST00000397408 SCAIQ8N9R8 606 aa18.77■□□□□ 0.6
TSPAN4-206ENST00000397408 ADPRHL1Q8NDY3 354 aa18.77■□□□□ 0.6
TSPAN4-206ENST00000397408 PFN4Q8NHR9 129 aa18.77■□□□□ 0.6
TSPAN4-206ENST00000397408 LINC01560Q8TB33 94 aa18.77■□□□□ 0.6
TSPAN4-206ENST00000397408 SLC7A6OSQ96CW6 309 aaPredicted RBP18.77■□□□□ 0.6
TSPAN4-206ENST00000397408 PYURFQ96I23 114 aa18.77■□□□□ 0.6
TSPAN4-206ENST00000397408 ZNF385AQ96PM9 386 aaKnown RBP18.77■□□□□ 0.6
TSPAN4-206ENST00000397408 KLHL4Q9C0H6 718 aa18.77■□□□□ 0.6
TSPAN4-206ENST00000397408 MUC13Q9H3R2 512 aa18.77■□□□□ 0.6
TSPAN4-206ENST00000397408 FANCFQ9NPI8 374 aa18.77■□□□□ 0.6
TSPAN4-206ENST00000397408 MEPEQ9NQ76 525 aaPredicted RBP18.77■□□□□ 0.6
TSPAN4-206ENST00000397408 MAN2C1Q9NTJ4 1040 aa18.77■□□□□ 0.6
TSPAN4-206ENST00000397408 KCNN3Q9UGI6 736 aa18.77■□□□□ 0.6
TSPAN4-206ENST00000397408 ENO4A6NNW6 628 aa18.76■□□□□ 0.59
TSPAN4-206ENST00000397408 C16orf97H3BN30 126 aa18.76■□□□□ 0.59
TSPAN4-206ENST00000397408 hCG_2039718K7EN88 272 aa18.76■□□□□ 0.59
TSPAN4-206ENST00000397408 PRSS23O95084 383 aa18.76■□□□□ 0.59
TSPAN4-206ENST00000397408 IGHV3-9P01782 118 aa18.76■□□□□ 0.59
TSPAN4-206ENST00000397408 VLDLRP98155 873 aa18.76■□□□□ 0.59
TSPAN4-206ENST00000397408 IL1RL1Q01638 556 aa18.76■□□□□ 0.59
TSPAN4-206ENST00000397408 BNIP1Q12981 228 aa18.76■□□□□ 0.59
TSPAN4-206ENST00000397408 PMS2P3Q13401 168 aa18.76■□□□□ 0.59
TSPAN4-206ENST00000397408 POU4F3Q15319 338 aa18.76■□□□□ 0.59
TSPAN4-206ENST00000397408 STAC2Q6ZMT1 411 aa18.76■□□□□ 0.59
TSPAN4-206ENST00000397408 GABRG1Q8N1C3 465 aa18.76■□□□□ 0.59
TSPAN4-206ENST00000397408 ZIC4Q8N9L1 334 aa18.76■□□□□ 0.59
TSPAN4-206ENST00000397408 TMEM45BQ96B21 275 aa18.76■□□□□ 0.59
TSPAN4-206ENST00000397408 NDUFAF4Q9P032 175 aa18.76■□□□□ 0.59
TSPAN4-206ENST00000397408 B3GAT1Q9P2W7 334 aa18.76■□□□□ 0.59
TSPAN4-206ENST00000397408 MT-ND1P03886 318 aa18.75■□□□□ 0.59
TSPAN4-206ENST00000397408 SEMG1P04279 462 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms