RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 TMEM99Q8N816 258 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 OR5J2Q8NH18 312 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 UCN2Q96RP3 112 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 FEVQ99581 238 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 GPA33Q99795 319 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 PSD2Q9BQI7 771 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 TP63Q9H3D4 680 aaPredicted RBP21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 CHST11Q9NPF2 352 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 NKX1-2Q9UD57 310 aaPredicted RBP21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 SEC14L4Q9UDX3 406 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 CDC42EP2O14613 210 aa21.11■□□□□ 0.97
TSPAN4-203ENST00000397397 ASAH2BP0C7U1 165 aa21.11■□□□□ 0.97
TSPAN4-203ENST00000397397 ACVR2AP27037 513 aa21.11■□□□□ 0.97
TSPAN4-203ENST00000397397 PMS2P3Q13401 168 aa21.11■□□□□ 0.97
TSPAN4-203ENST00000397397 MRPL49Q13405 166 aaKnown RBP21.11■□□□□ 0.97
TSPAN4-203ENST00000397397 IGFBP7Q16270 282 aa21.11■□□□□ 0.97
TSPAN4-203ENST00000397397 C1orf185Q5T7R7 199 aa21.11■□□□□ 0.97
TSPAN4-203ENST00000397397 PAQR6Q6TCH4 344 aa21.11■□□□□ 0.97
TSPAN4-203ENST00000397397 H1FNTQ75WM6 255 aaPredicted RBP21.11■□□□□ 0.97
TSPAN4-203ENST00000397397 P4HA3Q7Z4N8 544 aa21.11■□□□□ 0.97
TSPAN4-203ENST00000397397 NANOGNBQ7Z5D8 188 aa21.11■□□□□ 0.97
TSPAN4-203ENST00000397397 ADGRE4PQ86SQ3 457 aa21.11■□□□□ 0.97
TSPAN4-203ENST00000397397 ATG16L2Q8NAA4 619 aa21.11■□□□□ 0.97
TSPAN4-203ENST00000397397 FNDC9Q8TBE3 224 aa21.11■□□□□ 0.97
TSPAN4-203ENST00000397397 LIPHQ8WWY8 451 aa21.11■□□□□ 0.97
TSPAN4-203ENST00000397397 GTPBP3Q969Y2 492 aaKnown RBP21.11■□□□□ 0.97
TSPAN4-203ENST00000397397 RNPEPL1Q9HAU8 725 aa21.11■□□□□ 0.97
TSPAN4-203ENST00000397397 MRPL39Q9NYK5 338 aaKnown RBP21.11■□□□□ 0.97
TSPAN4-203ENST00000397397 KIF17Q9P2E2 1029 aa21.11■□□□□ 0.97
TSPAN4-203ENST00000397397 SH3BGRL2Q9UJC5 107 aa21.11■□□□□ 0.97
TSPAN4-203ENST00000397397 TINAGQ9UJW2 476 aa21.11■□□□□ 0.97
TSPAN4-203ENST00000397397 ZNF175Q9Y473 711 aa21.11■□□□□ 0.97
TSPAN4-203ENST00000397397 UNC119BA6NIH7 251 aa21.1■□□□□ 0.97
TSPAN4-203ENST00000397397 SLC22A20A6NK97 555 aa21.1■□□□□ 0.97
TSPAN4-203ENST00000397397 KDM4EB2RXH2 506 aaPredicted RBP21.1■□□□□ 0.97
TSPAN4-203ENST00000397397 SMAD9O15198 467 aaKnown RBP21.1■□□□□ 0.97
TSPAN4-203ENST00000397397 KLF4O43474 513 aa21.1■□□□□ 0.97
TSPAN4-203ENST00000397397 HOXD4P09016 255 aaPredicted RBP21.1■□□□□ 0.97
TSPAN4-203ENST00000397397 ANXA8P13928 327 aa21.1■□□□□ 0.97
TSPAN4-203ENST00000397397 FPR3P25089 353 aa21.1■□□□□ 0.97
TSPAN4-203ENST00000397397 GSSP48637 474 aa21.1■□□□□ 0.97
TSPAN4-203ENST00000397397 SLC9A3P48764 834 aa21.1■□□□□ 0.97
TSPAN4-203ENST00000397397 CASP6P55212 293 aa21.1■□□□□ 0.97
TSPAN4-203ENST00000397397 RIPK1Q13546 671 aa21.1■□□□□ 0.97
TSPAN4-203ENST00000397397 RPTNQ6XPR3 784 aa21.1■□□□□ 0.97
TSPAN4-203ENST00000397397 C3P1Q6ZMU1 363 aa21.1■□□□□ 0.97
TSPAN4-203ENST00000397397 FCRLAQ7L513 359 aa21.1■□□□□ 0.97
TSPAN4-203ENST00000397397 OAFQ86UD1 273 aa21.1■□□□□ 0.97
TSPAN4-203ENST00000397397 EPHX4Q8IUS5 362 aa21.1■□□□□ 0.97
TSPAN4-203ENST00000397397 SCAIQ8N9R8 606 aa21.1■□□□□ 0.97
TSPAN4-203ENST00000397397 GALNT11Q8NCW6 608 aa21.1■□□□□ 0.97
TSPAN4-203ENST00000397397 OR13C2Q8NGS9 318 aa21.1■□□□□ 0.97
TSPAN4-203ENST00000397397 CIB1Q99828 191 aa21.1■□□□□ 0.97
TSPAN4-203ENST00000397397 DGCR6LQ9BY27 220 aa21.1■□□□□ 0.97
TSPAN4-203ENST00000397397 CALHM2Q9HA72 323 aa21.1■□□□□ 0.97
TSPAN4-203ENST00000397397 CLCF1Q9UBD9 225 aa21.1■□□□□ 0.97
TSPAN4-203ENST00000397397 OSGIN2Q9Y236 505 aa21.1■□□□□ 0.97
TSPAN4-203ENST00000397397 AQP7P3A6NL99 342 aa21.09■□□□□ 0.97
TSPAN4-203ENST00000397397 ZNF814B7Z6K7 855 aa21.09■□□□□ 0.97
TSPAN4-203ENST00000397397 PDLIM1O00151 329 aa21.09■□□□□ 0.97
TSPAN4-203ENST00000397397 H3F3AP84243 136 aa21.09■□□□□ 0.97
TSPAN4-203ENST00000397397 TSPAN31Q12999 210 aa21.09■□□□□ 0.97
TSPAN4-203ENST00000397397 ANKRD34AQ69YU3 496 aa21.09■□□□□ 0.97
TSPAN4-203ENST00000397397 CCDC103Q8IW40 242 aa21.09■□□□□ 0.97
TSPAN4-203ENST00000397397 NIPSNAP1Q9BPW8 284 aa21.09■□□□□ 0.97
TSPAN4-203ENST00000397397 GABARAPL1Q9H0R8 117 aa21.09■□□□□ 0.97
TSPAN4-203ENST00000397397 ZNF556Q9HAH1 456 aa21.09■□□□□ 0.97
TSPAN4-203ENST00000397397 B3GALT5Q9Y2C3 310 aa21.09■□□□□ 0.97
TSPAN4-203ENST00000397397 TRAV27A0A087WT01 109 aa21.08■□□□□ 0.97
TSPAN4-203ENST00000397397 TRGV8A0A0C4DH27 118 aa21.08■□□□□ 0.97
TSPAN4-203ENST00000397397 BLOC1S5-TXNDC5H3BN57 136 aa21.08■□□□□ 0.97
TSPAN4-203ENST00000397397 OR6A2O95222 327 aa21.08■□□□□ 0.97
TSPAN4-203ENST00000397397 TGM6O95932 706 aa21.08■□□□□ 0.97
TSPAN4-203ENST00000397397 ADAP00813 363 aa21.08■□□□□ 0.97
TSPAN4-203ENST00000397397 SLC34A1Q06495 639 aa21.08■□□□□ 0.97
TSPAN4-203ENST00000397397 TRIP10Q15642 601 aa21.08■□□□□ 0.97
TSPAN4-203ENST00000397397 NSUN5P2Q63ZY6 315 aa21.08■□□□□ 0.97
TSPAN4-203ENST00000397397 RTL6Q6ICC9 239 aa21.08■□□□□ 0.97
TSPAN4-203ENST00000397397 ADPRHL1Q8NDY3 354 aa21.08■□□□□ 0.97
TSPAN4-203ENST00000397397 OR51A7Q8NH64 312 aa21.08■□□□□ 0.97
TSPAN4-203ENST00000397397 EME1Q96AY2 570 aa21.08■□□□□ 0.97
TSPAN4-203ENST00000397397 TNFRSF13CQ96RJ3 184 aa21.08■□□□□ 0.97
TSPAN4-203ENST00000397397 C9orf16Q9BUW7 83 aa21.08■□□□□ 0.97
TSPAN4-203ENST00000397397 SMURF2Q9HAU4 748 aa21.08■□□□□ 0.97
TSPAN4-203ENST00000397397 KLHL13Q9P2N7 655 aa21.08■□□□□ 0.97
TSPAN4-203ENST00000397397 FAM215AQ9Y5M1 114 aa21.08■□□□□ 0.97
TSPAN4-203ENST00000397397 CD8B2A6NJW9 211 aa21.07■□□□□ 0.96
TSPAN4-203ENST00000397397 PLPP3O14495 311 aa21.07■□□□□ 0.96
TSPAN4-203ENST00000397397 CYTIPO60759 359 aa21.07■□□□□ 0.96
TSPAN4-203ENST00000397397 RAMP1O60894 148 aa21.07■□□□□ 0.96
TSPAN4-203ENST00000397397 AQP8O94778 261 aa21.07■□□□□ 0.96
TSPAN4-203ENST00000397397 ATP6V1G2O95670 118 aa21.07■□□□□ 0.96
TSPAN4-203ENST00000397397 ADORA3P0DMS8 318 aa21.07■□□□□ 0.96
TSPAN4-203ENST00000397397 FCGR2AP12318 317 aa21.07■□□□□ 0.96
TSPAN4-203ENST00000397397 DAPP51397 102 aa21.07■□□□□ 0.96
TSPAN4-203ENST00000397397 P2RY4P51582 365 aa21.07■□□□□ 0.96
TSPAN4-203ENST00000397397 IL1RL1Q01638 556 aa21.07■□□□□ 0.96
TSPAN4-203ENST00000397397 ZBED5Q49AG3 693 aa21.07■□□□□ 0.96
TSPAN4-203ENST00000397397 TMEM225Q6GV28 225 aa21.07■□□□□ 0.96
TSPAN4-203ENST00000397397 FAHD1Q6P587 224 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms